Gchil5059.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5059.t1
Unique NameGchil5059.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length111
Homology
BLAST of Gchil5059.t1 vs. uniprot
Match: A0A2V3J612_9FLOR (60S acidic ribosomal protein P1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J612_9FLOR)

HSP 1 Score: 124 bits (312), Expect = 6.130e-35
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGAAPA 68
            MAE +EMACVYAALILHDDGIPITEDKIKTLTDAAGI VEPYWP MFAR+   VNMDDLISNIGAAPA
Sbjct:    1 MAETSEMACVYAALILHDDGIPITEDKIKTLTDAAGIKVEPYWPPMFARLLETVNMDDLISNIGAAPA 68          
BLAST of Gchil5059.t1 vs. uniprot
Match: R7QCC6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCC6_CHOCR)

HSP 1 Score: 120 bits (302), Expect = 6.060e-33
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGAAPAAGA 71
            MAE NEMACVYAAL+LHDDGI ITEDKIKTLT+AAGI VEPYWP MFA++   V +DDLI+NIGAAPA+GA
Sbjct:   36 MAETNEMACVYAALVLHDDGIAITEDKIKTLTEAAGITVEPYWPSMFAKLLETVKIDDLINNIGAAPASGA 106          
BLAST of Gchil5059.t1 vs. uniprot
Match: UPI00032B03E4 (60S acidic ribosomal protein P1-like isoform X1 n=1 Tax=Ochotona princeps TaxID=9978 RepID=UPI00032B03E4)

HSP 1 Score: 99.8 bits (247), Expect = 5.860e-25
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAGA 71
            MA V+E+AC+Y+ALILH+D + +TEDKI  L  AAG+ VEP+WPG+FA+  ANVN+D LI N+GA   APAAGA
Sbjct:    1 MASVSELACIYSALILHEDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIDSLICNVGAGGPAPAAGA 74          
BLAST of Gchil5059.t1 vs. uniprot
Match: A0A337S8W9_FELCA (Ribosomal protein lateral stalk subunit P1 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A337S8W9_FELCA)

HSP 1 Score: 98.6 bits (244), Expect = 1.490e-24
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAGA 71
            MA V+E+AC+Y+ALILHDD + +TEDKI  L  AAG+ VEP+WPG+FA+  ANVN+  LI N+GA   APAAGA
Sbjct:    1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGA 74          
BLAST of Gchil5059.t1 vs. uniprot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 n=118 Tax=Bilateria TaxID=33213 RepID=RLA1_HUMAN)

HSP 1 Score: 98.6 bits (244), Expect = 1.720e-24
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAGA 71
            MA V+E+AC+Y+ALILHDD + +TEDKI  L  AAG+ VEP+WPG+FA+  ANVN+  LI N+GA   APAAGA
Sbjct:    1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGA 74          
BLAST of Gchil5059.t1 vs. uniprot
Match: RLA1_RAT (60S acidic ribosomal protein P1 n=7 Tax=cellular organisms TaxID=131567 RepID=RLA1_RAT)

HSP 1 Score: 98.6 bits (244), Expect = 1.720e-24
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAGA 71
            MA V+E+AC+Y+ALILHDD + +TEDKI  L  AAG+ VEP+WPG+FA+  ANVN+  LI N+GA   APAAGA
Sbjct:    1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGA 74          
BLAST of Gchil5059.t1 vs. uniprot
Match: A0A8D1BZG1_PIG (60S acidic ribosomal protein P1 n=3 Tax=Laurasiatheria TaxID=314145 RepID=A0A8D1BZG1_PIG)

HSP 1 Score: 98.6 bits (244), Expect = 1.770e-24
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAGA 71
            MA V+E+AC+Y+ALILHDD + +TEDKI  L  AAG+ VEP+WPG+FA+  ANVN+  LI N+GA   APAAGA
Sbjct:    1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGA 74          
BLAST of Gchil5059.t1 vs. uniprot
Match: A0A8D2GMU3_UROPR (Ribosomal protein lateral stalk subunit P1 n=2 Tax=Urocitellus parryii TaxID=9999 RepID=A0A8D2GMU3_UROPR)

HSP 1 Score: 98.6 bits (244), Expect = 1.770e-24
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAGA 71
            MA V+E+AC+Y+ALILHDD + +TEDKI  L  AAG+ VEP+WPG+FA+  ANVN+  LI N+GA   APAAGA
Sbjct:    1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGA 74          
BLAST of Gchil5059.t1 vs. uniprot
Match: A0A6I8S4B0_XENTR (Ribosomal protein, large, P1 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8S4B0_XENTR)

HSP 1 Score: 97.4 bits (241), Expect = 4.510e-24
Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAG 70
            MA V+E+AC+Y+ALILHDD + ITEDKI TL   AG+ +EP+WP +FA+  AN+N+  LISN+GA   APAAG
Sbjct:    1 MASVSELACIYSALILHDDEVSITEDKISTLIKTAGVTIEPFWPSLFAKALANINIGSLISNVGAGGGAPAAG 73          
BLAST of Gchil5059.t1 vs. uniprot
Match: G7PXE7_MACFA (60S acidic ribosomal protein P1 n=2 Tax=Cercopithecinae TaxID=9528 RepID=G7PXE7_MACFA)

HSP 1 Score: 97.4 bits (241), Expect = 4.770e-24
Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    1 MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARIAANVNMDDLISNIGA---APAAGA 71
            MA V+E+AC+Y+ALILHDD + +TEDKI  L  AAG+ VEP+WPG+FA+  ANVN   LI N+GA   APAAGA
Sbjct:    1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNNGSLICNVGAGGPAPAAGA 74          
The following BLAST results are available for this feature:
BLAST of Gchil5059.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J612_9FLOR6.130e-3588.2460S acidic ribosomal protein P1 n=1 Tax=Gracilario... [more]
R7QCC6_CHOCR6.060e-3378.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI00032B03E45.860e-2562.1660S acidic ribosomal protein P1-like isoform X1 n=... [more]
A0A337S8W9_FELCA1.490e-2462.16Ribosomal protein lateral stalk subunit P1 n=3 Tax... [more]
RLA1_HUMAN1.720e-2462.1660S acidic ribosomal protein P1 n=118 Tax=Bilateri... [more]
RLA1_RAT1.720e-2462.1660S acidic ribosomal protein P1 n=7 Tax=cellular o... [more]
A0A8D1BZG1_PIG1.770e-2462.1660S acidic ribosomal protein P1 n=3 Tax=Laurasiath... [more]
A0A8D2GMU3_UROPR1.770e-2462.16Ribosomal protein lateral stalk subunit P1 n=2 Tax... [more]
A0A6I8S4B0_XENTR4.510e-2460.27Ribosomal protein, large, P1 n=1 Tax=Xenopus tropi... [more]
G7PXE7_MACFA4.770e-2462.1660S acidic ribosomal protein P1 n=2 Tax=Cercopithe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 23..109
e-value: 2.6E-20
score: 72.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..110
NoneNo IPR availablePANTHERPTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1coord: 3..110
NoneNo IPR availableCDDcd05831Ribosomal_P1coord: 6..63
e-value: 1.19415E-26
score: 92.7699
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..64
e-value: 6.0E-31
score: 108.1
IPR027534Ribosomal protein L12/P1/P2 familyHAMAPMF_01478Ribosomal_L12_archcoord: 7..110
score: 14.154838

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004393_piloncontigtig00004393_pilon:2483556..2483888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5059.t1Gchil5059.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004393_pilon 2483556..2483888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5059.t1 ID=Gchil5059.t1|Name=Gchil5059.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=111bp
MAEVNEMACVYAALILHDDGIPITEDKIKTLTDAAGIAVEPYWPGMFARI
AANVNMDDLISNIGAAPAAGAPAAAAAAAAADGAADDTKEQQKDESEEEE
EEEMEFDLFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR027534Ribosomal_L12/P1/P2