Gchil5054.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5054.t1
Unique NameGchil5054.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length281
Homology
BLAST of Gchil5054.t1 vs. uniprot
Match: A0A2V3J5M3_9FLOR (Phycocyanobilin lyase subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5M3_9FLOR)

HSP 1 Score: 343 bits (881), Expect = 1.520e-116
Identity = 181/249 (72.69%), Postives = 204/249 (81.93%), Query Frame = 0
Query:   29 MSGVNGGIDYEIDLSTLPASLASRIAYVQSGPDSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADAEVDWGVRYASIVGLEQFDAVKVLDEDLKRLGLKVVQAAANGEANVLSQGHDTESDGVNREISADPTVAARATLALEKMQKDCEVS 277
            MSGVNGGIDYEIDL+TLP SLASRI+YVQ+GPDSPTALI+AAE+IA ASKS+PQTLPVLVDMLGFNNP AA IAI+AL+ AGD ++P LLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACA +GPIPNVRRAAC+AL SL Y     AR AYECLL LAD E DWGVRYA+IV LE F+A+ +LD  LK LGL+VV AAA G  NVL++    E       I +DPTVAARAT+ALE M++  E S
Sbjct:    1 MSGVNGGIDYEIDLTTLPPSLASRISYVQNGPDSPTALISAAEEIALASKSHPQTLPVLVDMLGFNNPAAAGIAIAALVDAGDLSIPSLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACANSGPIPNVRRAACRALGSLHYTANEHARTAYECLLTLADKEADWGVRYAAIVALEHFEAISLLDRALKELGLRVVLAAAEGNGNVLNEQQSEEGKENKIAIQSDPTVAARATVALETMRQRLEAS 249          
BLAST of Gchil5054.t1 vs. uniprot
Match: A0A5J4Z101_PORPP (Phycocyanobilin lyase subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z101_PORPP)

HSP 1 Score: 208 bits (530), Expect = 9.140e-64
Identity = 124/241 (51.45%), Postives = 152/241 (63.07%), Query Frame = 0
Query:   29 MSGVNGGIDYEIDLSTLPASLASRIAYVQSGPDSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADAEVDWGVRYASIVGLEQFDAVKVLDEDLKRLGLKVVQAAANGEANVLSQGHDTESDGVNREISADPTVAARATLALEK 269
            MSGVNGGIDYEIDLS+LP  +A R+ YVQ GPDSPTALI AA  IA    S   TLPV+VDMLGFNNP AA IAI AL++ G  +V  LL GV AFNY+VNAYALRAL  IG+P+V+ VC+ CA+ GPIPNVRRAAC AL  L Y D      A E LL L   + DW VRYAS+  L QF   +++++ +  +  ++ Q A+                       +D  V ARA +ALE+
Sbjct:    2 MSGVNGGIDYEIDLSSLPEDVARRVEYVQGGPDSPTALIDAAHAIAACRIS--STLPVMVDMLGFNNPIAANIAIDALVRGGKDSVEFLLKGVGAFNYAVNAYALRALGRIGDPAVVDVCMECARGGPIPNVRRAACNALGQLLYNDQADCTGAVELLLLLLQ-DPDWSVRYASVSALHQFKQWQMIEDVIPSIRARLEQVASQ---------------------DSDRAVKARAHVALER 218          
BLAST of Gchil5054.t1 vs. uniprot
Match: A0A7S0T7T0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7T0_9RHOD)

HSP 1 Score: 196 bits (499), Expect = 4.640e-59
Identity = 107/178 (60.11%), Postives = 128/178 (71.91%), Query Frame = 0
Query:   29 MSGVNGGIDYEIDLSTLPASLASRIAYVQSGPDSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADAEVDWGVRYASIVGL 206
            MSGVNGGIDYEI+LS+LP  +A R+ YVQ GPDSPT LI AA  I++       T+PVLVDMLGFNNP AA IAI ALI+ G+ A+P LL GV AFNY+VNAYALRAL  IG+  VL VC+ CAKT PIPNVRRAA KA+  L+Y    +   ++E LL L   + DW VRY+S+  L
Sbjct:   49 MSGVNGGIDYEIELSSLPPEIAERVKYVQGGPDSPTLLIEAAHAISECRLEA--TIPVLVDMLGFNNPIAANIAIDALIREGERAIPSLLLGVGAFNYAVNAYALRALGRIGDARVLDVCVECAKTAPIPNVRRAAVKAIGMLRYEQGPELTSSFELLLELT-RDRDWSVRYSSVAAL 223          
BLAST of Gchil5054.t1 vs. uniprot
Match: M1VCC8_CYAM1 (Phycocyanobilin lyase beta subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCC8_CYAM1)

HSP 1 Score: 142 bits (359), Expect = 4.510e-37
Identity = 103/248 (41.53%), Postives = 136/248 (54.84%), Query Frame = 0
Query:   27 PRMSGVNGGIDYEIDLSTLPASLASRIAYVQSGPDSPTALITAAEQIA----QASKSY-------PQTL-PVLVDMLGFNNPPAARIAISALIQA-GDTAVPPLLTGVAAFNYSVNAYALRALAGIGNP-SVLQVCLACAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADAEV---DWGVRYASIVGLEQFDAVKVLDEDLKRLGLKVVQAAANGEANVLSQGHDTESDGVNREISADP 257
            PRMSGVNGG+ Y+ID   LP  +   +  +  GPDSP A I A E+IA    Q  +S        P TL P LVD LG+NNP AARIA+  L++  G  AVP LL GV A NY+VNAYALRAL  IG+  +V  V   CA  GPIPNVRRAA + LA L+Y ++   R   E  +A   + V   DW +RYA +  L      K ++   K     ++   AN +A+V+ +     +     E ++ P
Sbjct:   55 PRMSGVNGGLAYDIDEQQLPDQIKPLVQMIVRGPDSPAAFIDAMERIADWLWQQQQSANDRGTRPPDTLIPFLVDSLGYNNPVAARIALDLLVRLYGKGAVPVLLQGVGALNYAVNAYALRALGAIGDADAVFTVAKQCALRGPIPNVRRAAVRCLAQLKYEESANGRARCEDAVASLSSLVGDPDWTIRYALVWSLSHLLHRKFIE---KPEITNILAHIANQDADVVVRARAQRALAQFNEATSSP 299          
BLAST of Gchil5054.t1 vs. uniprot
Match: A0A7J7ICC6_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICC6_9RHOD)

HSP 1 Score: 142 bits (359), Expect = 4.510e-37
Identity = 98/222 (44.14%), Postives = 126/222 (56.76%), Query Frame = 0
Query:   29 MSGVNGGIDYEIDLSTLPASLASRIAYVQSGPDSPTALITAAEQIA--------QASKS---YPQTL-PVLVDMLGFNNPPAARIAISALIQA-GDTAVPPLLTGVAAFNYSVNAYALRALAGIGNP-SVLQVCLACAKTGPIPNVRRAACKALASLQYADAR----QARIAYECLLALADAEVDWGVRYASIVGLEQFDAVKVLDEDLKRLGLKVVQAAAN 232
            MSGVNGG+ Y++D S LP  +   +  +  GPDSP A I A +QIA        QA+ S    P TL P LVD LG+NNP AAR A+  L++  G  A+P LL GVAA NY+VNAYALRA+  IG+  +V  V   CA  GPIPNVRRAA + L  L+Y  A     + R A   L +L D + DW +RY  +  L  F      + DL  L  ++ Q  A+
Sbjct:   58 MSGVNGGLSYDVDESQLPEEIRPLVQMIVRGPDSPIAFIEAMQQIAEWLWAQQRQANSSDAALPDTLIPFLVDSLGYNNPVAARTAVDLLVRLYGKRAIPTLLQGVAALNYAVNAYALRAMGSIGDADAVFTVAKQCALRGPIPNVRRAAVRCLGLLRYDQAAGGESKRREAIAALSSLLD-DPDWTIRYTVVWSLSSFMQKAGNESDLATLLARIAQEDAD 278          
BLAST of Gchil5054.t1 vs. uniprot
Match: M2VSN3_GALSU (Phycocyanobilin lyase beta subunit (CpcF) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VSN3_GALSU)

HSP 1 Score: 129 bits (323), Expect = 1.060e-32
Identity = 76/179 (42.46%), Postives = 109/179 (60.89%), Query Frame = 0
Query:   29 MSGVNGGIDYEIDLSTLPASLASRIAYVQSGPDSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADAEVDWGVRYASIVGLE 207
            MSG+NGG+DY +DL+     +  +I  +Q G  +P  LI   + +A  +    + +PVLVD+LGFNNP AARIA+ A++  G  +   L+    AFNY+VNAYAL+AL  +G P  ++VCL  A  G +PNVRRAA  A+  L+Y +     +  E L A    + DW VRYA++V +E
Sbjct:    1 MSGINGGLDYSLDLNDFSPEIQEQIKTLQKGVQTPRELIETTKILAGYTDK--RIVPVLVDILGFNNPVAARIAMEAVVGFGIESKGFLVKATGAFNYAVNAYALKALGLLGFPDTIEVCLHHASQGTVPNVRRAAIIAIGRLRYRETELLSV-IESLSAFL-YQTDWSVRYAAVVSIE 175          
BLAST of Gchil5054.t1 vs. uniprot
Match: A0A7C3KB66_9CYAN (HEAT repeat domain-containing protein n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KB66_9CYAN)

HSP 1 Score: 106 bits (264), Expect = 4.230e-24
Identity = 72/185 (38.92%), Postives = 101/185 (54.59%), Query Frame = 0
Query:   48 SLASRIAYVQSGPDSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADA-----EVDWGVRYASIVGLEQF----DAVKVLDEDLKRLG 223
            SL   I  ++   DSP ALI+A   ++ A    P  +P+L+ +LGFNNP AA  A+  L+Q G+ AV PLL  +  +NY   AYA+RALA I +P  L V L  A+T   P+VRRAA K L  L +       I +    AL        + DW +RYA++VGL+      D+ +++   L RLG
Sbjct:    2 SLTELILAIEQA-DSPVALISAVRALSAARS--PDAIPMLIRVLGFNNPGAAVAAVDGLVQLGEEAVEPLLEQLDGYNYGARAYAIRALAAIADPRALGVLLEAAETDFAPSVRRAATKGLGFLDWHKLPDEAITHGQAAALKSLLYISHDPDWALRYAAVVGLQALASRNDSAELVRVVLNRLG 183          
BLAST of Gchil5054.t1 vs. uniprot
Match: A0A1Z4QKV0_9NOST (Phycocyanobilin lyase beta subunit n=1 Tax=Cylindrospermum sp. NIES-4074 TaxID=2005457 RepID=A0A1Z4QKV0_9NOST)

HSP 1 Score: 103 bits (257), Expect = 2.680e-23
Identity = 58/162 (35.80%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   61 DSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQYADAR--QARIAYECLLALADAEVDWGVRYASIVGLEQFDAVKVLDEDLK 220
            D+P  +++A + +A A    P  +P L+ + G+NNP AA IA++AL + G+ AVP LL  +  +NY   AY++R LA I +P  + V +  A T   P+VRRAA + L +L  A+    Q++ A   LL ++  + DW +RYA++VGL+    V  + + ++
Sbjct:   13 DTPARMVSAVQNLAAAKD--PAAIPTLIAVFGYNNPAAAAIAVAALTELGEQAVPQLLAQIDDYNYGARAYSIRTLAAIADPRAIDVLITAATTDFAPSVRRAAARGLGNLHTANLSFSQSQTALSALLFISQ-DSDWSIRYAAVVGLQALANVAEIQQPIR 171          
BLAST of Gchil5054.t1 vs. uniprot
Match: A0A8F4LEK9_9NOST (PBS lyase HEAT-like repeat protein n=1 Tax=Richelia sinica FACHB-800 TaxID=1357546 RepID=A0A8F4LEK9_9NOST)

HSP 1 Score: 103 bits (257), Expect = 2.880e-23
Identity = 61/165 (36.97%), Postives = 95/165 (57.58%), Query Frame = 0
Query:   61 DSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQY--ADARQARIAY----ECLLALADAEVDWGVRYASIVGLEQFDAVKVLDEDL 219
            D+P  ++TA + +A A    P  +P  + + G+NNP AA +A++AL + GD AVP LL  +  +NY   AY++R LA I +P  L V ++ A T   P+VRRAA K L  L +   D  Q ++A     E LL ++  + DW +RYA++VGL+    V  + + +
Sbjct:   12 DTPNQMVTAVKNLAAAKD--PAAIPTFIAVFGYNNPAAAAVAVAALTEFGDLAVPELLNQIDDYNYGARAYSIRTLAAIADPRALDVLISTAATDFAPSVRRAAAKGLGHLNWHKLDVSQRQLAINRALEALLFISQ-DADWSIRYAAVVGLQALAKVPEVQQTI 173          
BLAST of Gchil5054.t1 vs. uniprot
Match: UPI001686B1D3 (HEAT repeat domain-containing protein n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI001686B1D3)

HSP 1 Score: 102 bits (255), Expect = 5.790e-23
Identity = 72/211 (34.12%), Postives = 115/211 (54.50%), Query Frame = 0
Query:   62 SPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAARIAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLACAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADAEVDWGVRYASIVGLEQFDAVKVLDEDLKRLGLKVVQAAANGEANVLSQGHDTESDGVNREISADPTVAARATLALEKMQK 272
            SPT LI A + +A +S++  + +P L+++LG+NNP AA  A+  L++ G+TAVP L+  +  +NY   AYA+RALA +G+   L+V +  A+T   P+VRRAA K L  +  A  ++ + +   L+     + DW +RYA++V LE                  + QA  +  A   S  H    D       A+P V ARA LAL+++++
Sbjct:   15 SPTELIQAVQALAASSEA--EAIPALIEVLGYNNPAAAITAMQGLVRWGETAVPLLIEKLDGYNYGARAYAIRALATLGDARALEVLVQAAETDFAPSVRRAATKGLGGIYRAAPQRIQTSLSQLVQ----DEDWSIRYAAVVSLEA-----------------IAQAVDHPNAEA-SLKHLAGQD-------AEPVVQARALLALQRLRQ 194          
The following BLAST results are available for this feature:
BLAST of Gchil5054.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5M3_9FLOR1.520e-11672.69Phycocyanobilin lyase subunit beta n=1 Tax=Gracila... [more]
A0A5J4Z101_PORPP9.140e-6451.45Phycocyanobilin lyase subunit beta n=1 Tax=Porphyr... [more]
A0A7S0T7T0_9RHOD4.640e-5960.11Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
M1VCC8_CYAM14.510e-3741.53Phycocyanobilin lyase beta subunit n=1 Tax=Cyanidi... [more]
A0A7J7ICC6_9RHOD4.510e-3744.14Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M2VSN3_GALSU1.060e-3242.46Phycocyanobilin lyase beta subunit (CpcF) n=1 Tax=... [more]
A0A7C3KB66_9CYAN4.230e-2438.92HEAT repeat domain-containing protein n=1 Tax=Osci... [more]
A0A1Z4QKV0_9NOST2.680e-2335.80Phycocyanobilin lyase beta subunit n=1 Tax=Cylindr... [more]
A0A8F4LEK9_9NOST2.880e-2336.97PBS lyase HEAT-like repeat protein n=1 Tax=Richeli... [more]
UPI001686B1D35.790e-2334.12HEAT repeat domain-containing protein n=1 Tax=Lept... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 45..275
e-value: 1.5E-14
score: 55.9
NoneNo IPR availablePFAMPF13646HEAT_2coord: 115..206
e-value: 2.6E-11
score: 43.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 66..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004393_piloncontigtig00004393_pilon:2435456..2436298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5054.t1Gchil5054.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004393_pilon 2435456..2436298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5054.t1 ID=Gchil5054.t1|Name=Gchil5054.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=281bp
MRLLNFLPAPPILRRTQPVPQRCQQFPRMSGVNGGIDYEIDLSTLPASLA
SRIAYVQSGPDSPTALITAAEQIAQASKSYPQTLPVLVDMLGFNNPPAAR
IAISALIQAGDTAVPPLLTGVAAFNYSVNAYALRALAGIGNPSVLQVCLA
CAKTGPIPNVRRAACKALASLQYADARQARIAYECLLALADAEVDWGVRY
ASIVGLEQFDAVKVLDEDLKRLGLKVVQAAANGEANVLSQGHDTESDGVN
REISADPTVAARATLALEKMQKDCEVSVRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold