Gchil504.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil504.t1
Unique NameGchil504.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length168
Homology
BLAST of Gchil504.t1 vs. uniprot
Match: A0A2V3IPU9_9FLOR (PsbP-like protein 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPU9_9FLOR)

HSP 1 Score: 265 bits (677), Expect = 5.100e-88
Identity = 131/165 (79.39%), Postives = 146/165 (88.48%), Query Frame = 0
Query:    3 TLLASVPLLPLLPATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIERQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            TLLA  P  PLLPA A+DISG VTP++DLPKGFTILRP+GWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPV   + L D+G+A+QVG KLA ARN KL+ A EKDIDG+ AY+ EI+R+SAHQLTLLTVNKQKLYSVNASCSE+RW KREKLLRGVVDSFRP+L
Sbjct:   48 TLLAIAPFAPLLPAAAADISGFVTPHQDLPKGFTILRPNGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVAKDKSLTDLGTAEQVGTKLATARNAKLINAAEKDIDGIPAYLFEIKRESAHQLTLLTVNKQKLYSVNASCSERRWNKREKLLRGVVDSFRPKL 212          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A1X6NNU3_PORUM (PsbP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNU3_PORUM)

HSP 1 Score: 181 bits (458), Expect = 1.770e-54
Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 0
Query:   16 ATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIERQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            ATA ++   V  YKDL KGFTILRP GWN+FEA    YDIKWQD+IQPLE +TVLT+PV  G+ + D+G+   VG KLA +R  +LV AV K+ +G+  Y +E++  S HQLT L VNK KLYSVN S +E +W KREKLLRGV +SF+P L
Sbjct:   81 ATAVNLGSSVEVYKDLNKGFTILRPQGWNQFEATAGQYDIKWQDLIQPLEIITVLTTPVGKGKTVADIGTPDAVGTKLAKSRRAELVSAVSKEEEGLTYYTVELKSASVHQLTTLVVNKSKLYSVNVSSAEGKWSKREKLLRGVAESFKPSL 232          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A5J4YMB8_PORPP (PsbP-like protein 1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMB8_PORPP)

HSP 1 Score: 177 bits (449), Expect = 4.460e-53
Identity = 83/147 (56.46%), Postives = 105/147 (71.43%), Query Frame = 0
Query:   21 ISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIERQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            I  LVT Y D+PKGF++ RP GWNEF A  D YDIKWQDVIQP E +TVLT+PV  G+    +G+ Q+VGE+LA +R   L+ A E+D + V  Y +E++  + HQL  L++NK KLYSV A+C E RW KREKL RGVVDSF P+L
Sbjct:   89 IGSLVTAYSDIPKGFSMYRPQGWNEFSATPDMYDIKWQDVIQPTEQITVLTTPVSKGKTTESMGTPQEVGERLAKSRKATLIAATERDAENVKVYTIELQFGNLHQLNALSINKSKLYSVTATCGEPRWSKREKLYRGVVDSFSPKL 235          
BLAST of Gchil504.t1 vs. uniprot
Match: D4NY62_GALSU (Chloroplast photosystem II 23 kDa n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=D4NY62_GALSU)

HSP 1 Score: 157 bits (397), Expect = 4.010e-45
Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 0
Query:   19 SDISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIERQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            + ++  V  YKDL +G+ ILRP GWNEF   ++ YDIKWQD+IQPLE V + T  +   + + D+GS  Q+GEKLA  R  +LV A EK+  G+ AY +E++    HQL LLT +K KL++V A+CSE RW  REKLLR VV+SF P L
Sbjct:   95 ASVANQVETYKDLIQGYKILRPLGWNEFSGQRNQYDIKWQDIIQPLEVVMIATVDIGKNKSIKDLGSPMQIGEKLAKNRKLQLVTATEKETGGIPAYEIELKGDPLHQLVLLTASKSKLFNVTATCSESRWSNREKLLRTVVESFVPSL 243          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A7V5I2P9_9BACT (PsbP domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I2P9_9BACT)

HSP 1 Score: 152 bits (384), Expect = 1.810e-42
Identity = 78/155 (50.32%), Postives = 105/155 (67.74%), Query Frame = 0
Query:   15 PATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDN--YDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIERQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            PA   D+   +  Y DL +G+ + RP GWNEF+    N  Y+ K+QD+IQPLEFVTV + PV  G+ L  +G A+ VG++LA  R   LV A +K+ DG+  YV E  R+ AHQL+LLT+N+ +L+SVNA  SE RW++ EKLLR VVDSF P+L
Sbjct:  150 PAVPRDVRNQLELYVDLQRGYKMYRPKGWNEFDGDPGNTKYEKKFQDIIQPLEFVTVFSIPVKPGKTLASLGDAEAVGKRLAEQRGATLVAANQKESDGILYYVFEYVREPAHQLSLLTINRGRLFSVNACASEARWKRLEKLLRAVVDSFVPQL 304          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A7J7IHP7_9RHOD (PsbP-like protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHP7_9RHOD)

HSP 1 Score: 148 bits (373), Expect = 2.890e-42
Identity = 76/154 (49.35%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   16 ATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDN--YDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIERQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            A   D+  L+  Y DL +G+ + RP GWNEF+    N  Y+ K+QD+IQPLEFVTV + PV  G+ L  +G A+ VG +LA  R   LV A +K+ +GV  Y+ E  R+  HQL+L+T+N+ +L+SVNAS SE RW++ EKLLR VVDSF P+L
Sbjct:   29 ALPRDVRNLLELYVDLQRGYKMYRPKGWNEFDGDPGNTKYEKKFQDIIQPLEFVTVYSIPVKPGKTLESLGDAEAVGRRLAEKRGATLVAANQKESNGVLYYIFEYVREPVHQLSLITINRGRLFSVNASASEARWKRLEKLLRAVVDSFVPQL 182          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A7S2MZD3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZD3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.620e-34
Identity = 67/155 (43.23%), Postives = 99/155 (63.87%), Query Frame = 0
Query:   15 PATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGD-VGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIE-RQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            P   + + GL+  Y+D P+G++IL PSGWN+FE     YD+KWQD++ P E + V +SPV S     D +G  Q++G KLAA R+ KL++A E+  DG+  Y  +       HQL  L VNK K++S++A+ +EKRW KRE++   V+ SF P+L
Sbjct:   73 PRVTTRMGGLLERYQDGPRGWSILAPSGWNKFEGEVGAYDVKWQDLVDPRENIKVSSSPVKSSTTSIDALGEVQEIGAKLAAKRDAKLIKAEERITDGILFYKFDFAINDGTHQLLQLCVNKGKVWSLDANTTEKRWAKREEMYDNVLGSFLPKL 227          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A1Z5JX21_FISSO (Photosystem II oxygen-evolving enhancer protein 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JX21_FISSO)

HSP 1 Score: 125 bits (315), Expect = 3.390e-33
Identity = 67/157 (42.68%), Postives = 101/157 (64.33%), Query Frame = 0
Query:   15 PATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSG-RKLGDVGSAQQVGEKLAAARN-GKLVRAVEKDIDGVDAYVLEIER-QSAHQLTLLTVNKQKLYSVNASC-SEKRWRKREKLLRGVVDSFRPRL 167
            P   + + GL+ PY+D P+GF +L PSGWN+F+     YD+KWQD++ PLE + + ++PV S    +  +G+ +++G KLAA RN   LV+A E+  DG+  Y  E       HQL LLT++K KL+S++A+  +E RW+KR +L   VV SF P+L
Sbjct:   51 PRVVTRMGGLLEPYQDGPRGFRLLAPSGWNKFDGEVGAYDVKWQDLVDPLEQIKLSSTPVKSSIESVAALGTVEELGPKLAAKRNQATLVQASERITDGILFYTFEFALPDQTHQLLLLTIHKSKLWSLDANARNEGRWKKRSELYANVVGSFMPKL 207          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A6S8ZX58_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZX58_9STRA)

HSP 1 Score: 125 bits (314), Expect = 7.300e-33
Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 0
Query:   15 PATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGDV-GSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEIE-RQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            P   S + GL+  Y+D  +G ++L PSGWN+FE     YD+KWQD++ P E V + +SPV S     DV G  Q+VG KLAA R+ KL++A E+  DG+  Y  +       HQL  L VNK K++S++A+ +EKRW KRE++   ++ SF P+L
Sbjct:   68 PRIVSRMGGLLERYQDGARGLSLLVPSGWNKFEGEVGAYDVKWQDLVDPRENVKISSSPVKSTTSSIDVLGEVQEVGLKLAAKRDAKLIKAEERITDGILFYKFDFAINDGTHQLLQLCVNKGKVWSLDANTTEKRWSKREEMYNNILGSFLPKL 222          
BLAST of Gchil504.t1 vs. uniprot
Match: A0A7S0W0N6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0N6_9CRYP)

HSP 1 Score: 127 bits (318), Expect = 1.230e-32
Identity = 64/154 (41.56%), Postives = 98/154 (63.64%), Query Frame = 0
Query:   18 ASDISGLVTPYKDLPKGFTILRPSGWNEFEALQDNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGKLVRAVEKDIDGVDAYVLEI----ERQSAHQLTLLTVNKQKLYSVNASCSEKRWRKREKLLRGVVDSFRPRL 167
            AS + GL+ P+KD+ KGF +L+P GWN+F+A    YDIKW+D+++  E V V T  V + + +  +G  + +G+KLAA +  +LV A ++++DG+  Y        E+  A ++  L VNK +L+SV A+ SEKRW KREK    V+ SF P+L
Sbjct:  151 ASRMGGLLEPFKDINKGFQLLKPRGWNQFDAAPGEYDIKWEDLVEKSEMVMVGTKEVQTAKSVDALGDVEALGKKLAAKKKAELVSAEKREVDGILFYKFIFKQGNEKVGAREVYQLCVNKGRLWSVTATTSEKRWAKREKFYDNVMMSFVPKL 304          
The following BLAST results are available for this feature:
BLAST of Gchil504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPU9_9FLOR5.100e-8879.39PsbP-like protein 1, chloroplastic n=1 Tax=Gracila... [more]
A0A1X6NNU3_PORUM1.770e-5457.89PsbP domain-containing protein n=1 Tax=Porphyra um... [more]
A0A5J4YMB8_PORPP4.460e-5356.46PsbP-like protein 1, chloroplastic n=1 Tax=Porphyr... [more]
D4NY62_GALSU4.010e-4551.01Chloroplast photosystem II 23 kDa n=1 Tax=Galdieri... [more]
A0A7V5I2P9_9BACT1.810e-4250.32PsbP domain-containing protein n=2 Tax=cellular or... [more]
A0A7J7IHP7_9RHOD2.890e-4249.35PsbP-like protein n=1 Tax=Cyanidiococcus yangmings... [more]
A0A7S2MZD3_9STRA3.620e-3443.23Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JX21_FISSO3.390e-3342.68Photosystem II oxygen-evolving enhancer protein 2 ... [more]
A0A6S8ZX58_9STRA7.300e-3343.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0W0N6_9CRYP1.230e-3241.56Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 26..164
e-value: 1.5E-27
score: 96.6
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 14..164
e-value: 6.9E-33
score: 115.9
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 6..164
NoneNo IPR availablePANTHERPTHR31407:SF4PSBP-LIKE PROTEIN 1, CHLOROPLASTICcoord: 6..164
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 28..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000060_piloncontigtig00000060_pilon:536561..537064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil504.t1Gchil504.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000060_pilon 536561..537064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil504.t1 ID=Gchil504.t1|Name=Gchil504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=168bp
MATLLASVPLLPLLPATASDISGLVTPYKDLPKGFTILRPSGWNEFEALQ
DNYDIKWQDVIQPLEFVTVLTSPVDSGRKLGDVGSAQQVGEKLAAARNGK
LVRAVEKDIDGVDAYVLEIERQSAHQLTLLTVNKQKLYSVNASCSEKRWR
KREKLLRGVVDSFRPRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand