Gchil5013.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5013.t1
Unique NameGchil5013.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length179
Homology
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BLAST of Gchil5013.t1 vs. uniprot
Match: A0A2V3ISH1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISH1_9FLOR)

HSP 1 Score: 73.2 bits (178), Expect = 1.760e-12
Identity = 52/161 (32.30%), Postives = 63/161 (39.13%), Query Frame = 0 
Query:   37 DPQSWWWSVVVSEWAVRTAAFILAEAYDQYRL-----------------------------------------------------------------------------------CREEAEANRHAPLEVPAEHPRGYVDLSDYYRDYADGDPIVENEPED 114
            DP+  +WSVVV+E AV TA++ILAEAYD YRL                                                                                    REEAE  R+AP  VP +HPRG+VDL DYYR Y  GDP+V+NEP+D
Sbjct:    4 DPRPGFWSVVVTECAVCTASYILAEAYDPYRLWYIQPRVRAAIRRLDMRVPLGGVANAEEMLSLLDFLEGVNWDEVPIDNSQRRLHHNGSGPGLGRNTALAGDYIFFDPWEYRELTREEAEDYRNAPRMVPPDHPRGFVDLDDYYRSYIGGDPMVDNEPDD 164
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BLAST of Gchil5013.t1 vs. uniprot
Match: A0A2V3IC93_9FLOR (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC93_9FLOR)

HSP 1 Score: 62.4 bits (150), Expect = 3.600e-8
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:   30 VGSSLLNDPQSWWWSVVVSEWAVRTAAFILAEAYDQYRL 68
            +GSS+L DP+S  WSVVVSEWAV  AA+ILAEAYDQYRL
Sbjct:  355 LGSSMLWDPRSGLWSVVVSEWAVHVAAYILAEAYDQYRL 393
The following BLAST results are available for this feature:
BLAST of Gchil5013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISH1_9FLOR1.760e-1232.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IC93_9FLOR3.600e-876.92Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004393_piloncontigtig00004393_pilon:2127005..2127876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5013.t1Gchil5013.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004393_pilon 2127005..2127876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5013.t1 ID=Gchil5013.t1|Name=Gchil5013.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=179bp
MSGVGEPGPGISYRTRTRRLSASRLLTDVVGSSLLNDPQSWWWSVVVSEW
AVRTAAFILAEAYDQYRLCREEAEANRHAPLEVPAEHPRGYVDLSDYYRD
YADGDPIVENEPEDPGYAPMEDDESGEASEEPVEYGGAAPSRAADAVRTD
SYPTPSVAGPPATTAGAEWSEVIARFLR*
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