Gchil4375.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4375.t1
Unique NameGchil4375.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length254
Homology
BLAST of Gchil4375.t1 vs. uniprot
Match: A0A2V3J1N8_9FLOR (SAGA-associated factor 29 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1N8_9FLOR)

HSP 1 Score: 328 bits (840), Expect = 6.550e-111
Identity = 200/252 (79.37%), Postives = 214/252 (84.92%), Query Frame = 0
Query:    1 MLLTEECVHVQVPSAAAERQKFIAAQEKRWLSLGWDRSRYTNELAQAATRFLSAIAFSDHRDPIDLNLLSDDAGSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGKRRAEAEPPARKPPKKPKRNGKSTLISSGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLPSKPQTFDSKKRVLAVYPQTTVFYPAWLKSRKGRNWVVEFDDEDDNEENKSKEVDCRHIIQ 252
            MLLTEEC H+QVP AAAER KFIAAQEKRWL+LGWDR+RYT ELA AA+RFLSAIAFSDHRDPIDLNLLSDDAGS AXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   KR  KST+I+SG KVACLDRS DADEHQWVLGTVS+YSSDTRKYEVIDDADGE Q YSVPKRDLRVLP+K   FD+KKRVLAVYP TTVFYPA LK+RKG+NW+VEF+DEDD+EENK KEVD RHIIQ
Sbjct:    1 MLLTEECAHIQVPRAAAERHKFIAAQEKRWLALGWDRTRYTTELAHAASRFLSAIAFSDHRDPIDLNLLSDDAGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------KRTNKSTVIASGTKVACLDRSADADEHQWVLGTVSRYSSDTRKYEVIDDADGETQTYSVPKRDLRVLPTKCPNFDTKKRVLAVYPYTTVFYPASLKTRKGKNWLVEFEDEDDHEENKLKEVDGRHIIQ 241          
BLAST of Gchil4375.t1 vs. uniprot
Match: A0A7S0BUQ8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BUQ8_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 1.080e-18
Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = 0
Query:  131 TLISSGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDAD-----------GEAQIYSVPKRDLRVLPSKPQTFDSKK-RVLAVYPQTTVFYPAWLK----SRKGRNWVVEFDDEDDNEENKSKEVDCRHII 251
            T +     VAC  R  ++ + QW+LG + +Y  ++RKYEV+D  D           G  + Y + K  +RVLPS+P+   +K  R LAVYP TTVFYPA +     +R+ R + +EFDDE++  + + K V   H++
Sbjct:   17 TGLEPDTNVACKVRDAESGDSQWILGRLLQYFPESRKYEVLDVGDSDEVAQQRKPSGRPRCYKLSKSKIRVLPSEPRLDLAKNARTLAVYPNTTVFYPATVHISAMTREDREYTLEFDDEEEQGDLRWKRVPAYHVL 153          
BLAST of Gchil4375.t1 vs. uniprot
Match: M2VXE3_GALSU (SGF29 C-terminal domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXE3_GALSU)

HSP 1 Score: 84.3 bits (207), Expect = 4.590e-15
Identity = 51/141 (36.17%), Postives = 79/141 (56.03%), Query Frame = 0
Query:  122 KKPKRNGKSTLISSGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVID-------DADGEAQIYSVPKRDLRVLPSKPQTFDSKKRVLAVYPQTTVFYPAWLKS--RKGRN--WVVEFDDEDDNEENKSKEVDCRHII 251
            K+ KR+ +S +I    +VAC  +  D+DE  WVLG V  YS+ + +Y +ID       +   E   +  P   + +       F ++ RVLA+YP TTVFYPA ++S  + G+   + +EFDDED++EE   K V  R++I
Sbjct:  293 KRSKRSHESGVIPPQTEVACRVKEEDSDEWTWVLGIVDSYSNSSGQYRIIDIEELGNEEVAKERYYFVSPSNVIPLSSDTKHVFPAETRVLAIYPDTTVFYPATIRSSRKNGKQLYYALEFDDEDEDEE-IVKHVPARYVI 432          
BLAST of Gchil4375.t1 vs. uniprot
Match: Q1ZXN8_DICDI (DUF1325 family protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q1ZXN8_DICDI)

HSP 1 Score: 82.8 bits (203), Expect = 1.420e-14
Identity = 44/124 (35.48%), Postives = 77/124 (62.10%), Query Frame = 0
Query:  136 GAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLPSK---PQTFDSKKRVLAVYPQTTVFYPAWL---KSRKGRN--WVVEFDDEDDNEENKSKEVDCRHII 251
            G +   L  + D+  +QW+L  VS +S  T+KYEVID+ + E++ +SV ++D+  LPS    P TF +  +VLA++P TT FYPA +   +  KG+   + + F+D+ +N E  ++ V+ +H++
Sbjct:  284 GMQPGQLVAARDSKSNQWILAKVSSFSQKTQKYEVIDEDEEESKRFSVGQKDIIQLPSHTNLPPTFSNNTKVLAMFPDTTAFYPAVVVNVQKVKGKPTFYHLHFEDDQENGETPNRRVNAQHVV 407          
BLAST of Gchil4375.t1 vs. uniprot
Match: D3BMD1_POLPP (DUF1325 family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BMD1_POLPP)

HSP 1 Score: 77.8 bits (190), Expect = 5.250e-13
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 0
Query:  130 STLISSGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLPSK---PQTFDSKKRVLAVYPQTTVFYPAWL-KSRKGRN----WVVEFDDED-DNEENKSKEVDCRH 249
            S  I  G +VA  ++S +     W+L  V  Y+S T+KYEVID+ + E++ + V  +D+  LPS    P TF +  +VLA++P TT FYPA +  S+K +N    + + FDD+  DN +  S++V  +H
Sbjct:  208 SAQIPPGTQVAAKEKSNN-----WILAKVGSYNSKTQKYEVIDEDEDESKKFHVSIKDIIQLPSANSLPPTFAANTKVLAMFPDTTTFYPAVVVSSQKVKNKTSFYTLHFDDDQGDNGQTPSRKVAAQH 331          
BLAST of Gchil4375.t1 vs. uniprot
Match: A0A8J4PWZ6_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PWZ6_9MYCE)

HSP 1 Score: 77.0 bits (188), Expect = 8.920e-13
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 0
Query:  135 SGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLPSK---PQTFDSKKRVLAVYPQTTVFYPAWLKS---RKGR--NWVVEFDDEDDNEENKSKEVDCRHII 251
            SG +VA  D        QW+L  V+ ++  T+KYEVID+ + E + +SV  +D+  LP+    P TF +  +VLA++P TT FYPA + S    KG+  ++ + F+D+ +N +  ++ V   H+I
Sbjct:  204 SGQQVAAKDSKSS----QWILAKVNGFNQKTQKYEVIDEDEDEPKRFSVAPKDVIQLPTLSTLPPTFANNTKVLAMFPDTTAFYPAVVVSVTKTKGKPTHYTLHFEDDQENGQTPNRRVSALHVI 324          
BLAST of Gchil4375.t1 vs. uniprot
Match: F0ZHT4_DICPU (SGF29 C-terminal domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHT4_DICPU)

HSP 1 Score: 75.5 bits (184), Expect = 3.430e-12
Identity = 47/134 (35.07%), Postives = 75/134 (55.97%), Query Frame = 0
Query:  127 NGKSTLISSGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLPSK---PQTFDSKKRVLAVYPQTTVFYPAWLKS-----RKGRNWVVEFDDEDDNEENKSKEVDCRHIIQ 252
            N  +  I  G  VA  D      + QW+L  V+ YS  T+KYEVID+ + E + +SV  +D+  LPS    PQ    + +VLA++P TT FYPA + +      K  ++ + F+D+ +N E  ++ V+ +H+IQ
Sbjct:  211 NSANGQIQPGQLVAARDT-----KLQWILAKVNSYSPKTQKYEVIDEDEDEPKRFSVGSKDILQLPSPNNLPQ-IPLQTKVLAMFPDTTAFYPAVVVNVHKVKGKPTHYHLHFEDDQENGETPNRRVNAQHVIQ 338          
BLAST of Gchil4375.t1 vs. uniprot
Match: A0A1X6NN27_PORUM (SGF29 C-terminal domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NN27_PORUM)

HSP 1 Score: 73.9 bits (180), Expect = 1.980e-11
Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 0
Query:  133 ISSGAKVACLDRSGDADEHQ-WVLGTVSKYSSDTRKYEVID-----DADGEAQ-----------IYSVPKRDLRVL-PSKPQTFDSKKRVLAVYPQTTVFYPAWLK----SRKGRNWVVEFDDEDDN 237
            +    +VAC  R  +      W+LGTV +Y++DT+KYEV+D     D D +A+            YSVP+  L VL P+      +  RVLA+YP TT FYPA +     SR+   +++ FDDE+D+
Sbjct:  372 VQPDTEVACKVRDLEGSGGWIWILGTVLRYAADTKKYEVLDAGEVEDDDNDAEKRRNGHPPQPKSYSVPRNQLSVLLPNPNMRLSAGTRVLAMYPDTTTFYPATVAENAASRRDHMYLLNFDDEEDD 498          
BLAST of Gchil4375.t1 vs. uniprot
Match: UPI0006450A93 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450A93)

HSP 1 Score: 72.4 bits (176), Expect = 4.400e-11
Identity = 42/128 (32.81%), Postives = 77/128 (60.16%), Query Frame = 0
Query:  133 ISSGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLP---SKPQTFDSKKRVLAVYPQTTVFYPAWLKSR-----KGRNWVVEFDDE-DDNEENKSKEVDCRHII 251
            I  G  VA  +++ +     W+L  V+ +++ T+KYEVID+ + E++ ++V  +D+  LP   S P TF S  +VLA++P TT FYPA + S      K  ++ + FDD+ ++N +  S++V  ++++
Sbjct:  230 IPIGILVAAKEKNNN-----WILAKVNSFNAKTQKYEVIDEDEDESKKFNVGLKDIIQLPNPASLPPTFASSTKVLAMFPDTTTFYPAIVVSSQKVKSKTTHYTLHFDDDVNENGQTPSRKVAAQYVV 352          
BLAST of Gchil4375.t1 vs. uniprot
Match: UPI0006448AF7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448AF7)

HSP 1 Score: 70.9 bits (172), Expect = 1.410e-10
Identity = 41/128 (32.03%), Postives = 76/128 (59.38%), Query Frame = 0
Query:  133 ISSGAKVACLDRSGDADEHQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLPSKP---QTFDSKKRVLAVYPQTTVFYPAWLK-SRKGRNWVVEF-----DDEDDNEENKSKEVDCRHII 251
            I  G +VA  DRS +     W+L  V+ +++ T+KYE+ID+ + E++ ++V  +D+  LP+      TF +  +VLA++P TT FYPA +  S+K +N   ++     DD  +N +  +++V  +++I
Sbjct:  217 IPIGTQVAAKDRSNN-----WILAKVNSFNAKTQKYELIDEDEAESKKFTVSLKDIIQLPTTAALANTFATNTKVLAMFPDTTTFYPALVVGSQKIKNKTTQYTLHFDDDAGENGQTPNRKVAAQYVI 339          
The following BLAST results are available for this feature:
BLAST of Gchil4375.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3J1N8_9FLOR6.550e-11179.37SAGA-associated factor 29 n=1 Tax=Gracilariopsis c... [more]
A0A7S0BUQ8_9RHOD1.080e-1836.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2VXE3_GALSU4.590e-1536.17SGF29 C-terminal domain-containing protein n=1 Tax... [more]
Q1ZXN8_DICDI1.420e-1435.48DUF1325 family protein n=1 Tax=Dictyostelium disco... [more]
D3BMD1_POLPP5.250e-1337.21DUF1325 family protein n=1 Tax=Polysphondylium pal... [more]
A0A8J4PWZ6_9MYCE8.920e-1335.20Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
F0ZHT4_DICPU3.430e-1235.07SGF29 C-terminal domain-containing protein n=1 Tax... [more]
A0A1X6NN27_PORUM1.980e-1137.01SGF29 C-terminal domain-containing protein n=1 Tax... [more]
UPI0006450A934.400e-1132.81hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI0006448AF71.410e-1032.03hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 137..193
e-value: 2.1E-9
score: 39.1
NoneNo IPR availableGENE3D2.30.30.140coord: 194..253
e-value: 1.5E-11
score: 46.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..134
NoneNo IPR availablePANTHERPTHR21539:SF0SAGA-ASSOCIATED FACTOR 29coord: 76..251
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 136..252
e-value: 2.5E-22
score: 79.4
IPR010750SGF29 tudor-like domainPROSITEPS51518SGF29_Ccoord: 129..253
score: 30.723343
IPR037802SAGA-associated factor 29PANTHERPTHR21539UNCHARACTERIZEDcoord: 76..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:2378646..2379407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4375.t1Gchil4375.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 2378646..2379407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4375.t1 ID=Gchil4375.t1|Name=Gchil4375.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=254bp
MLLTEECVHVQVPSAAAERQKFIAAQEKRWLSLGWDRSRYTNELAQAATR
FLSAIAFSDHRDPIDLNLLSDDAGSGADAGSSAGSGASRASRASRGSRTS
RGARVTGKRRAEAEPPARKPPKKPKRNGKSTLISSGAKVACLDRSGDADE
HQWVLGTVSKYSSDTRKYEVIDDADGEAQIYSVPKRDLRVLPSKPQTFDS
KKRVLAVYPQTTVFYPAWLKSRKGRNWVVEFDDEDDNEENKSKEVDCRHI
IQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010750SGF29_tudor-like_dom
IPR037802SGF29