Gchil4355.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4355.t1
Unique NameGchil4355.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length413
Homology
BLAST of Gchil4355.t1 vs. uniprot
Match: A0A2V3J1X8_9FLOR (PAPA-1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1X8_9FLOR)

HSP 1 Score: 365 bits (937), Expect = 1.210e-120
Identity = 265/412 (64.32%), Postives = 301/412 (73.06%), Query Frame = 0
Query:    4 VESFSSDEVDKLPSVPRIRRSSGAKPPVPRSSRSGSKSAKRGSSVAEKQPIRQSSRRRIGKKSPREEVFNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDHGGTMADNDSKDESSVKDENELNVEMSGEEXXXXXXXXXGSES-----------KNASSFNSHVK-RRKTIKESSSXXXXXXGEXXXXXXXXXXXXXSNYFTNDSGDGEGNELIKEQRDMLAKLEAEVN-NDSEDLRSESSEELKAGKSRRLTSRQRAMQGETVELEYTKLGSPKTKKKDVQQEDWDHDEEMELKRQQKARLRQMVSEKRNREKRAAMVDKVLRGVTSKRKKFTLATEARAAQVEVRLTQNEMRDGCLRYVSNKNGSSLSIPKDTVAPPYLSRSLKASYPPICKRDPKTGKRVF 402
            +ESFSSDEV+KLP+VPR+RRSSGAKPP PRSSRS SKS+KR SS+AEK+PIRQS+RRRI K+S RE+  NS                           XXXXXXXX      +   + KD+S  K+ENE +  +  E XXXXXXXXX               K+AS ++   K RRKTI+ESSS        XXXXXXXXXXX       N+S + EG E+IK Q D+LA+LE E N NDSED +SESSEE+K  KSRRLTSRQRA+QGE V+LEY+KL SPKTKKK+VQ+E WDHDEEMELKRQQKARLRQMVSEKRNREKRAAMVDKVLRGVTSKRKKFTLATEARAAQVEVRL QNEMRDGC+RYVSNKNG +LSIPKD   P YL RSLKA YPP C+RDPKTGKR+ 
Sbjct:    1 MESFSSDEVNKLPAVPRVRRSSGAKPPAPRSSRSASKSSKRESSIAEKRPIRQSARRRISKRSFREDSVNSEYEDNDESHVVVRRTSRRIQKTRKVIEXXXXXXXX------IVHTEDKDDSETKEENESSPGIGDEXXXXXXXXXXXXXXXXXXXXXXXXXKSASIYSRRAKKRRKTIRESSSDGRGNSXXXXXXXXXXXXXDLG----NESAEAEGVEIIKGQNDILAQLEEEGNDNDSEDFKSESSEEVKPMKSRRLTSRQRALQGENVKLEYSKLESPKTKKKEVQEE-WDHDEEMELKRQQKARLRQMVSEKRNREKRAAMVDKVLRGVTSKRKKFTLATEARAAQVEVRLAQNEMRDGCMRYVSNKNGITLSIPKDASTPSYLGRSLKAVYPPKCERDPKTGKRLL 401          
BLAST of Gchil4355.t1 vs. uniprot
Match: R7QG84_CHOCR (PAPA-1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG84_CHOCR)

HSP 1 Score: 200 bits (509), Expect = 7.570e-57
Identity = 116/187 (62.03%), Postives = 141/187 (75.40%), Query Frame = 0
Query:  219 MLAKLE-AEVNNDSEDLRSESSEELKAG--KSRRLTSRQRAMQGETVELEYTKLGSPKTKKKDVQQEDWDHDEEMELKRQQKARLRQMVSEKRNREKRAAMVDKVLRGVTSKRKKFTLATEARAAQVEVRLTQNEMRDGCLRYVSNKNGSSLSIPKDTVAPPYLSRSLKASYPPICKRDPKTGKRVF 402
            +LA+LE AE  +D  D        ++ G  K+ RLT RQRAMQGE V+LEYTKL SPK KK    +E W +DEE ELK+QQ+ARLRQM+ EKRN+EKRAAMVDKVLRGVTSKRKK T+A+E R A+V  RL++NEMR GC+R+VSN  G+SLSIP++  AP YL  SLKA YP  C RDP+TGKR+F
Sbjct:  193 ILAELEEAEAMDDGSDPLDSDDSVVEKGTKKTERLTRRQRAMQGENVKLEYTKLESPKAKKAAPPEEAWSNDEEAELKKQQRARLRQMIHEKRNKEKRAAMVDKVLRGVTSKRKKLTMASEERVAKVGTRLSKNEMRKGCIRFVSNPTGTSLSIPEEDDAPAYLQESLKAVYPKPCLRDPRTGKRIF 379          
BLAST of Gchil4355.t1 vs. uniprot
Match: A0A1X6PFD6_PORUM (PAPA-1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFD6_PORUM)

HSP 1 Score: 90.1 bits (222), Expect = 3.350e-16
Identity = 58/125 (46.40%), Postives = 76/125 (60.80%), Query Frame = 0
Query:  282 EDWDHD---EEMELKRQQKARLRQMVSEKRNREKRAAMVDKVLRGVTSKRKKFTLATEARAAQVEVRLTQNEMRDGCLRYVSNKNGSSLSIPKDTVAPPYLSRSLKASYPPI-CKRDPKTGKRVF 402
            ED D D   EE  L+++Q ARLR++  EK+ +EKR A +++VLRGVT+KRKK   A+EA  A     L  N  R G +R++SN+ G SLS       PP ++  L    PP  C  DPKTGKRVF
Sbjct:  248 EDGDGDADAEEAVLRKEQVARLRRITHEKKRQEKRVATIERVLRGVTTKRKKAVAASEAVVADARDSLAVNRPRPGAVRHISNRGGESLSFVAGDALPPLVAVGLPRRAPPRPCTWDPKTGKRVF 372          
BLAST of Gchil4355.t1 vs. uniprot
Match: A0A7S0T9H4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T9H4_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 7.930e-8
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 0
Query:  250 LTSRQRAMQG----ETVELEYTKLGSPKTKKKDVQQEDWDHDEEMELKRQQKARLRQMVSEKRNREKRAAMVDKVLRGVTSKRKKFTLATEARAAQVEVRLTQNEMRDGCLRYVSNKNGSSLSIPKD---TVAPPYLSRSLK------ASYPPICKRDPKTGKRVFPNMST 407
            +T+RQRAM G    E V+L +          K  ++ D +  E  E KR Q +RLR + SEK+ +E++ A ++KVLRG + ++++     E R  + E     + +     R  + K+GS L +  D       PYLS  LK         PP+C RDPKTGKR+ P  +T
Sbjct:   66 MTARQRAMAGHEAPELVDLSHFYATQGIGAGKQQRELDPERKERRERKRLQASRLRAINSEKKRQERQEATIEKVLRGASRRQRQ---GEETRKLRQEQASNVDTIAPRHARLWAQKDGSQLVVFPDYSEIQTDPYLSHFLKYETAPNVPRPPVCARDPKTGKRILPVTTT 233          
The following BLAST results are available for this feature:
BLAST of Gchil4355.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J1X8_9FLOR1.210e-12064.32PAPA-1 domain-containing protein n=1 Tax=Gracilari... [more]
R7QG84_CHOCR7.570e-5762.03PAPA-1 domain-containing protein n=1 Tax=Chondrus ... [more]
A0A1X6PFD6_PORUM3.350e-1646.40PAPA-1 domain-containing protein n=1 Tax=Porphyra ... [more]
A0A7S0T9H4_9RHOD7.930e-833.92Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..240
NoneNo IPR availableCOILSCoilCoilcoord: 290..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..53
IPR006880INO80 complex subunit B-like conserved regionSMARTSM01406PAPA_1_2coord: 289..373
e-value: 3.1E-6
score: 36.7
IPR006880INO80 complex subunit B-like conserved regionPFAMPF04795PAPA-1coord: 289..372
e-value: 5.4E-12
score: 46.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:2232366..2233604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4355.t1Gchil4355.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 2232366..2233604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4355.t1 ID=Gchil4355.t1|Name=Gchil4355.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=413bp
MSPVESFSSDEVDKLPSVPRIRRSSGAKPPVPRSSRSGSKSAKRGSSVAE
KQPIRQSSRRRIGKKSPREEVFNSEDDGNDSSSVVVRRTSRRTQKTRKVI
EDDDEDDEDGDHGGTMADNDSKDESSVKDENELNVEMSGEEEDDDPMDDD
GSESKNASSFNSHVKRRKTIKESSSESKDDDGEDEGVDDSNDVNEDSNYF
TNDSGDGEGNELIKEQRDMLAKLEAEVNNDSEDLRSESSEELKAGKSRRL
TSRQRAMQGETVELEYTKLGSPKTKKKDVQQEDWDHDEEMELKRQQKARL
RQMVSEKRNREKRAAMVDKVLRGVTSKRKKFTLATEARAAQVEVRLTQNE
MRDGCLRYVSNKNGSSLSIPKDTVAPPYLSRSLKASYPPICKRDPKTGKR
VFPNMSTLTVTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006880INO80B_C