Gchil4346.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil4346.t1
Unique Name	Gchil4346.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	307

Homology

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BLAST of Gchil4346.t1 vs. uniprot
Match: A0A2V3J2Z6_9FLOR (EAF domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z6_9FLOR)

HSP 1 Score: 117 bits (294), Expect = 1.070e-27
Identity = 89/217 (41.01%), Postives = 116/217 (53.46%), Query Frame = 0

Query:    1 MGRSVRATRPAAARAFLQLKFSHIGAVVDARRPGVLLPATPPSDACDVSLPLRDAPHRALVHACQRRRSVSGPRNFVLVFAAGAFWLERVDHVLYAARAGRERDADMPXXXXXXXXXXXXXXPHDAVPAAAA-AFAADPESWMDVDSASGSPVTPDTNE---LDDDSRRRPAVGGKSISQLPVRRVLSPPPLQPPTPMQSLPSFAAKSLSSKAPASR 213
            +G+S+   +P  AR+ L L+FSH+ ++V     GVL+PA    +AC V LPL + P RA    CQR +  S  RN+ LVFA  AFWLERVD V   A+AG       P                  VPAA     A DP+SWMD+DS SGSP+TP+ NE   +DD    R + GGKSI     RR++S         MQSL +  A + +S  PA+R
Sbjct:   24 LGKSI--VKPNNARSLLSLRFSHVPSIVHPHAAGVLIPA---QNACAVELPLSNQPSRAARFDCQRAQRKSDVRNYALVFAKNAFWLERVDDVFNFAKAGTINSQTTP------------------VPAAPVDRVANDPDSWMDIDSPSGSPITPEGNEGAPVDDHPPIR-SHGGKSIPVYSDRRMVSA------RGMQSLHTSTAAAPASPPPATR 210

The following BLAST results are available for this feature:

BLAST of Gchil4346.t1 vs. uniprot

BLAST of Gchil4346.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2Z6_9FLOR	1.070e-27	41.01	EAF domain-containing protein n=1 Tax=Gracilariops...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 219..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..293

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004373_pilon	contig	tig00004373_pilon:2180834..2181754 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil4346.t1	Gchil4346.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004373_pilon 2180834..2181754 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil4346.t1 ID=Gchil4346.t1|Name=Gchil4346.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=307bp
MGRSVRATRPAAARAFLQLKFSHIGAVVDARRPGVLLPATPPSDACDVSL
PLRDAPHRALVHACQRRRSVSGPRNFVLVFAAGAFWLERVDHVLYAARAG
RERDADMPPPPPPQPPQLQPQPPHDAVPAAAAAFAADPESWMDVDSASGS
PVTPDTNELDDDSRRRPAVGGKSISQLPVRRVLSPPPLQPPTPMQSLPSF
AAKSLSSKAPASRAALPRLEDDDDDDDDEEEEEEEEEEEEEEEEEEEDDD
DVAVLEEALMEEAVVEHAVVEQQPVAHHHQSSSDESSDSDSSADSAEYTD
RSSDED*