Gchil4331.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4331.t1
Unique NameGchil4331.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length403
Homology
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BLAST of Gchil4331.t1 vs. uniprot
Match: A0A2V3J1Z0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z0_9FLOR)

HSP 1 Score: 60.5 bits (145), Expect = 2.190e-6
Identity = 29/62 (46.77%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:   29 SAMCVFIAICVFHFHRLAASDSD-----ILEQGLRNLVLPGSLHAADPPLSSPLDAGSLSHH 85
            SA+  F+ +C +H HR    D        L  GL  LVLPGSLHA DPP  SP+DA ++ HH
Sbjct:    2 SALLFFLLVCAYHVHRYVGMDPSEGPLSSLRTGLHKLVLPGSLHALDPPPPSPVDASTVVHH 63
The following BLAST results are available for this feature:
BLAST of Gchil4331.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1Z0_9FLOR2.190e-646.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:2122471..2123679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4331.t1Gchil4331.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 2122471..2123679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4331.t1 ID=Gchil4331.t1|Name=Gchil4331.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=403bp
MHQEQQRRKMFSSLRACCPSPQSPCLSASAMCVFIAICVFHFHRLAASDS
DILEQGLRNLVLPGSLHAADPPLSSPLDAGSLSHHTPVSGASPFSHHSSL
RQSLSAFLHRAMQQPQEHVLASDLLHGRSPRALMRIADRLYPMESQNLQN
QFSHTNKRGRDFSDRQAAHTHTAMGDSVHNSIHPTGDVADAVGDSVHHLK
KLDSLAQEASRRHPVIEAIHSIIGKPAQTETVDRKIHSFDNDHHQAVHMS
TASADLSEAPAHVRATDLNIIGSEHVSGNGAALDKDSIQVSDKNTLVGPE
ERVGSFEEGKPLDVDASSSEWKQQNPTIHTEGKRDGRLSDAPDKGGILSF
LWGSSHSEEAQTDIREKKDVAVTSSVLEVAEVKAAGNREDSLSIRRNIDD
YQ*
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