Gchil4324.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4324.t1
Unique NameGchil4324.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length197
Homology
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BLAST of Gchil4324.t1 vs. uniprot
Match: R7Q596_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q596_CHOCR)

HSP 1 Score: 127 bits (318), Expect = 5.690e-33
Identity = 96/234 (41.03%), Postives = 115/234 (49.15%), Query Frame = 0 
Query:    7 LLTLALAFPSLVRHGR-------GESNRTVGISLLDLQSGV-----------GYRPTLAPVASAAVSASDPPPELPPHGVHIYDSLHHLPTRLLSTHTNMAPRCAARHTSSPYRPYVCGSKCENVLLAMRAHCKA----PHG---------------WVPCAKARKFRRCLARVCYRATGARQR------ASP-PVGFYDRSSVAIVRYHRPLPLYERRARRNRQSSTQSAIFK 196
            +LTLAL F + + H R         +NR+     L L   V           G RP  AP A      SDPP      GV IYDSL  +PT  L        +C ++  +  + PYVCG +CE +LLA+  +CK     P G               W  C KARKF RC ARVCYR T A +       A P PV + D  +VAIVRY RPLP +E  ARRNRQSSTQSAIFK
Sbjct:    7 VLTLALLFATPLTHARVLRDFVRPGTNRSANSPALSLAFPVENSRNRHNIRRGSRPAYAPPADD----SDPP------GVRIYDSLDAVPTARLLAQAARHKKCFSKGQTLCWAPYVCGHRCEQILLAVDGYCKKYAQPPDGTECTDKQGSCALSLSWKRCKKARKFNRCFARVCYRRTAALRHHQHQSLAIPRPVSYEDTENVAIVRYRRPLPKHEILARRNRQSSTQSAIFK 230
The following BLAST results are available for this feature:
BLAST of Gchil4324.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q596_CHOCR5.690e-3341.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:2103537..2104127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4324.t1Gchil4324.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 2103537..2104127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4324.t1 ID=Gchil4324.t1|Name=Gchil4324.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=197bp
MKCCRLLLTLALAFPSLVRHGRGESNRTVGISLLDLQSGVGYRPTLAPVA
SAAVSASDPPPELPPHGVHIYDSLHHLPTRLLSTHTNMAPRCAARHTSSP
YRPYVCGSKCENVLLAMRAHCKAPHGWVPCAKARKFRRCLARVCYRATGA
RQRASPPVGFYDRSSVAIVRYHRPLPLYERRARRNRQSSTQSAIFK*
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