Gchil4238.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4238.t1
Unique NameGchil4238.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length187
Homology
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BLAST of Gchil4238.t1 vs. uniprot
Match: A0A2V3J176_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J176_9FLOR)

HSP 1 Score: 185 bits (470), Expect = 6.550e-57
Identity = 79/110 (71.82%), Postives = 94/110 (85.45%), Query Frame = 0 
Query:   70 PEPEKKCKVLVPGIPTTVLNVMCLCPGVTSHALLIRPETPTIGGCLELCFENDALIQEACDAAFDLPGGGPPRYFTFNDAVLRGGQKRCCEDVCGSVFSVSRQGTRFCNE 179
            P+ EKKC V  PGIPT++LNV CLCPGV SHA+ IRPETPTIGGC+E C+E+D LIQ+ACD A+ LPGGGPPRYF FNDAVL+GGQ+RCCE+VCG  F ++R GTRFC+E
Sbjct:   48 PQSEKKCLVYTPGIPTSILNVQCLCPGVQSHAIQIRPETPTIGGCMERCYEHDELIQKACDDAYYLPGGGPPRYFAFNDAVLKGGQRRCCEEVCGGKFRITRPGTRFCDE 157
The following BLAST results are available for this feature:
BLAST of Gchil4238.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J176_9FLOR6.550e-5771.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1630033..1630593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4238.t1Gchil4238.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1630033..1630593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4238.t1 ID=Gchil4238.t1|Name=Gchil4238.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=187bp
MARTLLLVALFYSAVLLRNAEASRWDEYYNSPYYNPETDPRTTPSPSASP
SVSATPSSSPSASPSISAAPEPEKKCKVLVPGIPTTVLNVMCLCPGVTSH
ALLIRPETPTIGGCLELCFENDALIQEACDAAFDLPGGGPPRYFTFNDAV
LRGGQKRCCEDVCGSVFSVSRQGTRFCNEPKGVYWY*
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