Gchil4196.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4196.t1
Unique NameGchil4196.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length230
Homology
BLAST of Gchil4196.t1 vs. uniprot
Match: A0A2V3J2C8_9FLOR (Transmembrane emp24 domain-containing protein 10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2C8_9FLOR)

HSP 1 Score: 363 bits (933), Expect = 1.140e-125
Identity = 178/228 (78.07%), Postives = 204/228 (89.47%), Query Frame = 0
Query:    2 GKRASSILLALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRVSGGKSDMDIDVWVTNLQGKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEYEDEEEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKLC 229
             +R   + +A +L + A+A+RFYLEPGQRRCFTEELPSGSKVTG+TRVSGGKSDM IDVWVT LQG+VLY+K+A DHGKFSF TPK++R+HRPAD+YEYE+EEE+T+RICIEHQQKAGRVHPAGT+RAIEFNLDQAF G S E V+RAAKA+DTDRLQKSLR+MHTSLSGMIGD+TRLQRRER LT +ME TT HV+VLAI SL VT+  CAAQYKYYEGYFKQKKLC
Sbjct:    3 NRRVILLFVAFNLFVAANAIRFYLEPGQRRCFTEELPSGSKVTGQTRVSGGKSDMPIDVWVTTLQGRVLYNKRAEDHGKFSFITPKVEREHRPADDYEYEEEEEETYRICIEHQQKAGRVHPAGTRRAIEFNLDQAFGGVS-EDVERAAKATDTDRLQKSLRQMHTSLSGMIGDLTRLQRRERNLTARMEHTTGHVLVLAIFSLTVTIGICAAQYKYYEGYFKQKKLC 229          
BLAST of Gchil4196.t1 vs. uniprot
Match: A0A1X6NTR7_PORUM (GOLD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTR7_PORUM)

HSP 1 Score: 151 bits (382), Expect = 6.740e-42
Identity = 87/218 (39.91%), Postives = 120/218 (55.05%), Query Frame = 0
Query:   18 ADAVRFYLEPGQRRCFTEELPSGSKVTGETRVSGGKSDMDIDVWVTNLQGKVLYHKKAPDHGKFSFDTPKIQR--QHRPADEYEYEDE-----EEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            A AV FYL PGQRRCFTE+LP  + + GE  +S G   M++DVWV    G+VL+H++   HGKFSF TP+       RP +E E +++     EED +++CIEHQ     +H  GTKR + F LD   +   T G   AAK  D D + ++L  MH +L  M   +  L  RE+ L +  E T   V   + +   V +AT A Q  Y + Y K KK+
Sbjct:   28 ATAVHFYLLPGQRRCFTEDLPLNTLIKGEASISTGTGYMELDVWVITKNGRVLFHRRKTHHGKFSFTTPEHPDVDHSRPREEDEDDEDNLYGSEEDNYQVCIEHQDHPDAIHDHGTKRLVSFRLDHDGSYDPTGGRSTAAKGKDVDGVVRALEDMHHTLLSMKNQLDTLHWREKRLAKANEGTNERVAWYSSVGFLVLLATGAYQSFYMKRYLKSKKI 245          
BLAST of Gchil4196.t1 vs. uniprot
Match: A0A5J4Z3Y7_PORPP (Transmembrane protein Tmp21 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3Y7_PORPP)

HSP 1 Score: 84.3 bits (207), Expect = 4.730e-16
Identity = 66/240 (27.50%), Postives = 106/240 (44.17%), Query Frame = 0
Query:    5 ASSILLALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRVSGGKSDMDIDVWVTNLQGKVLYHKKAPDHGKFSFDTPKIQ--RQHRP----------ADEYEYEDEEE----DTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            A  +L+A++ +    A+RF L+ G  RCFTE     S V GE  V+ GK  M +D+ + +  G V++ KK  DHGKF F T   +  R HR            D++ Y D+EE      +R+C+    K+     A  K A      +   G+  +  D  AK      L+ +LR M+  +S ++ D+                    V+  +++S  V +   A Q  + + Y K +KL
Sbjct:   16 ALGVLIAVTSLSSVHAIRFMLDRGTERCFTETFSDHSTVMGEYLVATGKGHMSVDLEIMDDSGGVIFTKKDVDHGKFEFQTHSRRDGRGHRGHMRDPDDNPYMDDFYYYDDEELWAAPKYRLCV----KSPEAEDADDKAASRRVSLKILTGSVAKDYDSLAKEEHLSELEVTLRAMNDEVSDLVKDLEXXXXXXXXXXXXXXXXXXXVVTFSVVSCLVMLVVGAYQVFFMKNYLKARKL 251          
BLAST of Gchil4196.t1 vs. uniprot
Match: A0A6P3X4M3_DINQU (transmembrane emp24 domain-containing protein bai isoform X1 n=11 Tax=Formicidae TaxID=36668 RepID=A0A6P3X4M3_DINQU)

HSP 1 Score: 72.8 bits (177), Expect = 4.730e-12
Identity = 63/226 (27.88%), Postives = 98/226 (43.36%), Query Frame = 0
Query:   10 LALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRVS---GGKSDMDIDVWVTNLQGKVLYHKKAPDHGK---FSFDTPKIQRQHRPADEYEYEDEEEDTFRIC-IEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            LA+SLI+ A  + FYLEP   +C  EE+ +   VTGE  VS   G K+D  I     + +G  L  K+   HGK   FSF T                 E  DTF IC + H          G ++ +     +     S EG+    +A+    ++  L+R+      ++ D  R+++ E  +    E T + V+  ++ S+ V       Q  Y+  YF+ KKL
Sbjct:   10 LAISLIVQAQGIMFYLEPNSHKCLKEEVHANVLVTGEYEVSEALGQKTDYVIQ----DSKGHTLSQKEDIPHGKLLKFSFVT-----------------ETYDTFEICFVSHVPNHIVPDQRGVRQEVMLITKRGIEAKSYEGL--IGEAAKLKPVEVELKRLEDLSEAIVQDFARMRKNEEEMRDTNEATNTRVLYFSLFSICVLFGLSTWQLFYFRRYFRMKKL 212          
BLAST of Gchil4196.t1 vs. uniprot
Match: M2W7Y6_GALSU (Emp24/gp25L/p24 family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W7Y6_GALSU)

HSP 1 Score: 72.4 bits (176), Expect = 9.490e-12
Identity = 63/234 (26.92%), Postives = 102/234 (43.59%), Query Frame = 0
Query:    6 SSILLALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRVSGGKSDMDIDVWVTNLQGKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEYEDEEEDTFRICIEHQQKAGRVHPAG-----------TKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            S + + L  I  + A  FYL    + CFTE+L S +KV+GE  V+G +  M +D+ V     +  + K   + G+F+F TPK     +P D     DE    F   + H   + R  P             T+R +   +D      +     R AK    + L+ +LRR+   +     ++  L  RE+ +    E T S V  L I ++ V +A    +  + + YF+ KKL
Sbjct:   11 SLVFIFLLYIQTSIAFEFYLNKNAKLCFTEQLTSNTKVSGEYAVAGSEGTMSVDLTVIGPDRRDYFSKLGIESGRFTFKTPKHPIL-KPEDAKYAADEH---FPPAVYHFCFSARSLPENIEANAHQPQVVTRRRVSLKVDVL---PTERDYARLAKEEHLNSLEVALRRIEDEIRQFSNELDILSSREQTMRNINEITNSRVTWLGIFNVLVMIAAGIYEMYHMKNYFRHKKL 237          
BLAST of Gchil4196.t1 vs. uniprot
Match: L1JFZ5_GUITC (GOLD domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFZ5_GUITC)

HSP 1 Score: 66.2 bits (160), Expect = 1.010e-9
Identity = 54/213 (25.35%), Postives = 91/213 (42.72%), Query Frame = 0
Query:   12 LSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGE---TRVSGGKSDMDIDVWVTNLQGKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEYEDEEEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVD-----RAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQY 216
            LSL+ V  A++F L  G+ +CF+E+LPS + VTG+     +  G+++M I++ VT+   K++Y K     GKF+F T                      + +C  +            K  +EF   +  +     G+D     +  K      +Q +LR M   L+ +       ++RE  L    E T S VM   + ++ V + T   QY
Sbjct:    8 LSLLTVTTALKFDLPSGKVKCFSEDLPSNTLVTGDFAAEAIPDGQNNMPIEIQVTDPFEKIIYTKDDISQGKFAFTTATTG-----------------DYIVCFHN------------KGGLEFMTQRRVSLVLKHGIDARDYSQVMKEEHLSGVQGALREMEDRLTEIRQQFVSERKREEYLRDLTETTCSRVMWFGVFTVLVCIGTSMIQY 191          
BLAST of Gchil4196.t1 vs. uniprot
Match: F5HEJ5_CRYNB (GOLD domain-containing protein n=11 Tax=Cryptococcus TaxID=5206 RepID=F5HEJ5_CRYNB)

HSP 1 Score: 65.5 bits (158), Expect = 2.270e-9
Identity = 61/238 (25.63%), Postives = 100/238 (42.02%), Query Frame = 0
Query:    1 MGKRASSILLALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRV-------SGGKSD--MDIDVWVTNLQ-GKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEYEDEEEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            M  R S  L AL L+ VA+A+ FY E  ++RCF EELPS + V G  +           K D  M I V V  L    ++   + P  G+F+F +      H P D             IC+      G +     K  ++ N+     G+S    D AA  +    L   +R +++ ++ +  +   ++  E       E T +  +  ++L + V +     Q K+ + YF+ KKL
Sbjct:    1 MKMRISQALFALPLLSVANALHFYFESNEKRCFLEELPSQTIVEGHYKAFLWNENEKQWKKDEAMGIHVTVEELATSHIVVDTRGPPDGRFTFTS------HEPGD-----------HNICLHSNITGGWLSNEHIKMYLDLNV-----GSSR--FDNAADQTHVTTLSSKIRELNSKVADIQREQRYMREVEANFRDASERTNTRAVWWSLLQIAVLIGAAVWQMKHLKVYFEDKKL 214          
BLAST of Gchil4196.t1 vs. uniprot
Match: A0A5M6C6R8_9TREE (GOLD domain-containing protein n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C6R8_9TREE)

HSP 1 Score: 65.5 bits (158), Expect = 2.270e-9
Identity = 63/233 (27.04%), Postives = 98/233 (42.06%), Query Frame = 0
Query:    6 SSILLALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRV-------SGGKSD--MDIDVWVTNLQ-GKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEYEDEEEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            S+ILLAL L+   +A+ FY E  ++RCF EELPS + V G  +        +  K D  M I V V  L  G  + + + P  G+F+F +      H P D             IC+      G +     K  ++ N+     G+S   V   +  S    L   LR ++T +  +  +   L+  E       E T S  +  ++  + V V     Q +Y + YF+ KKL
Sbjct:    6 SNILLALPLLSAVNALHFYFESNEKRCFLEELPSDTIVEGHYKAYLWNENANEWKMDQEMGIHVSVEELSSGHTVVNTRGPPDGRFTFTS------HEPGD-----------HNICLHSNITGGWLSTQHIKLYLDINV-----GSSKPDVQ--SDLSHVSTLSSKLRDLNTKVEDIQREQRYLREVEATFRDASESTNSRAVWWSLAQIVVLVGAGVWQMRYLKVYFEDKKL 214          
BLAST of Gchil4196.t1 vs. uniprot
Match: A0A4P9ZLU4_9FUNG (Membrane protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZLU4_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 7.740e-8
Identity = 60/224 (26.79%), Postives = 95/224 (42.41%), Query Frame = 0
Query:   18 ADAVRFYLEPGQRRCFTEELPSGSKVTG----------ETRVSGGKSDMDIDVWVTNLQ---GKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEYEDEEEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            A  + FYL   +R+CF EELP  + VTG          E R+    S   I + VT ++      + ++KA + G+F+F T  IQ QH                 +C++     G        + I+   D  F    T+  D+AA   D+  L   +R ++T  + +  +       E       E   SHV+   +L L V   TC  Q +Y +G+F++KKL
Sbjct:   21 AQPLHFYLHNTERKCFLEELPKHTVVTGHFIAKEWIEQEKRLIDNPS---IGIQVTAIELPSNHEIMNQKAANQGRFTF-TSAIQGQHY----------------VCLQ-----GNSSNWFNPQTIQVEYDMTFG--KTDADDKAAVKLDS--LSGRVRELNTRTNALQLEXXXXXXXEAEFRDLSETVNSHVVWYVVLQLVVLSLTCVWQVRYLKGFFEKKKL 215          
BLAST of Gchil4196.t1 vs. uniprot
Match: A0A1E3HG04_9TREE (GOLD domain-containing protein n=4 Tax=Cryptococcus TaxID=5206 RepID=A0A1E3HG04_9TREE)

HSP 1 Score: 60.8 bits (146), Expect = 1.020e-7
Identity = 54/235 (22.98%), Postives = 97/235 (41.28%), Query Frame = 0
Query:    4 RASSILLALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRVS---------GGKSDMDIDVWVTNLQ-GKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEYEDEEEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAAKASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVLAILSLFVTVATCAAQYKYYEGYFKQKKL 228
            + + + LAL L+   +A+ FY E  ++RCF EELPS + V G  +             +  M I V V  L  G  + + + P  G+F+F +      H P D             IC+      G +     K  ++ N+  A        +D++   S    L   +R ++  ++ +  +   L+  E       E T +  +  ++L + V +A    Q ++ + YF+ KKL
Sbjct:    2 KLAQVFLALPLLSAVNALHFYFESDEKRCFLEELPSETIVEGHYKAFLWDEQQNQWKPEEAMGIHVTVDELSSGHNVVNTRGPPDGRFTFTS------HEPGD-----------HNICLHSNITGGWLSNQHIKMYLDLNVGSAK-------IDQSDDKSHVTTLSSKIRELNVKVADIQREQRYLREVEADFRNASESTNARAVWWSLLQIVVLIAAAGWQMRHLKVYFEDKKL 212          
The following BLAST results are available for this feature:
BLAST of Gchil4196.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A2V3J2C8_9FLOR1.140e-12578.07Transmembrane emp24 domain-containing protein 10 n... [more]
A0A1X6NTR7_PORUM6.740e-4239.91GOLD domain-containing protein n=1 Tax=Porphyra um... [more]
A0A5J4Z3Y7_PORPP4.730e-1627.50Transmembrane protein Tmp21 n=1 Tax=Porphyridium p... [more]
A0A6P3X4M3_DINQU4.730e-1227.88transmembrane emp24 domain-containing protein bai ... [more]
M2W7Y6_GALSU9.490e-1226.92Emp24/gp25L/p24 family protein n=1 Tax=Galdieria s... [more]
L1JFZ5_GUITC1.010e-925.35GOLD domain-containing protein (Fragment) n=1 Tax=... [more]
F5HEJ5_CRYNB2.270e-925.63GOLD domain-containing protein n=11 Tax=Cryptococc... [more]
A0A5M6C6R8_9TREE2.270e-927.04GOLD domain-containing protein n=1 Tax=Kwoniella s... [more]
A0A4P9ZLU4_9FUNG7.740e-826.79Membrane protein n=1 Tax=Dimargaris cristalligena ... [more]
A0A1E3HG04_9TREE1.020e-722.98GOLD domain-containing protein n=4 Tax=Cryptococcu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 20..224
e-value: 7.4E-26
score: 101.9
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 20..224
e-value: 2.0E-33
score: 115.9
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 30..136
score: 12.575284
IPR015720Transmembrane emp24 domain-containing proteinPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 8..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableTMHMMTMhelixcoord: 194..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1352158..1352925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4196.t1Gchil4196.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1352158..1352925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4196.t1 ID=Gchil4196.t1|Name=Gchil4196.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=230bp
MGKRASSILLALSLILVADAVRFYLEPGQRRCFTEELPSGSKVTGETRVS
GGKSDMDIDVWVTNLQGKVLYHKKAPDHGKFSFDTPKIQRQHRPADEYEY
EDEEEDTFRICIEHQQKAGRVHPAGTKRAIEFNLDQAFAGASTEGVDRAA
KASDTDRLQKSLRRMHTSLSGMIGDMTRLQRRERMLTQKMEETTSHVMVL
AILSLFVTVATCAAQYKYYEGYFKQKKLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720Emp24-like