Gchil4143.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4143.t1
Unique NameGchil4143.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length100
Homology
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A2V3J1L6_9FLOR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1L6_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 8.140e-54
Identity = 82/95 (86.32%), Postives = 88/95 (92.63%), Query Frame = 0
Query:    1 MGGNAEVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKEERRAARIARDEAEA 95
            MGG ++VAE KMQCTDEEM QNRIP+DYRDFCAHKLIPLNNCRRKN YLPFRCEDERH YEKCQYDQYMRRVNEMKAI+KEER+ AR AR+EAEA
Sbjct:    1 MGGGSKVAEPKMQCTDEEMAQNRIPLDYRDFCAHKLIPLNNCRRKNLYLPFRCEDERHDYEKCQYDQYMRRVNEMKAILKEERKMARKAREEAEA 95          
BLAST of Gchil4143.t1 vs. uniprot
Match: R7QRG1_CHOCR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRG1_CHOCR)

HSP 1 Score: 138 bits (347), Expect = 1.440e-39
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 0
Query:    1 MGGNAEVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKEERRAA 86
            MGGN  V EAKMQ T EEM++ RIP  +RDFCAHKLIPLN CRRKNF+LPFRCE+ERH YEKCQ+DQYMRRV EMKAI+KE+++AA
Sbjct:   67 MGGNEPVGEAKMQVTREEMMEARIPNHWRDFCAHKLIPLNKCRRKNFFLPFRCEEERHEYEKCQHDQYMRRVAEMKAILKEQKKAA 152          
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A498HHD7_MALDO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498HHD7_MALDO)

HSP 1 Score: 97.1 bits (240), Expect = 3.280e-24
Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    5 AEVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKEE 82
            AE    KM  T  EMV+NR+PI YRD CAH LIPLN CR+  FYLP++CE+ERH YEKC+Y+  M R+  M+ I +EE
Sbjct:    3 AEGTSKKMMATQAEMVENRVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHTYEKCEYELVMERMLAMQKIREEE 80          
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A2G5B5U9_COERN (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B5U9_COERN)

HSP 1 Score: 96.3 bits (238), Expect = 3.770e-24
Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    5 AEVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRR------VNEMKAI 78
            AE  E +M+ + E+M   RIP+ YRD+CAH L+PLN CR +  YLP++CE+ERHAYEKCQY+ +MRR      +NE K+I
Sbjct:    2 AEFEEPEMKISAEDMASARIPLRYRDYCAHMLVPLNKCRHRTMYLPWKCEEERHAYEKCQYEDFMRRAKMLSQINENKSI 81          
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A090M4F5_OSTTA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M4F5_OSTTA)

HSP 1 Score: 95.9 bits (237), Expect = 4.420e-24
Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   10 AKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKA 77
            ++M  T EEM + ++ I YRDFCAH LIPLN CRRK+F+LP++CE ERH YEKCQY +YM+RV  MKA
Sbjct:    5 SEMIATREEMREAKLDIGYRDFCAHLLIPLNECRRKSFFLPWKCEHERHVYEKCQYKEYMKRVAAMKA 72          
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A6P4B6L7_ZIZJJ (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=fabids TaxID=91835 RepID=A0A6P4B6L7_ZIZJJ)

HSP 1 Score: 96.3 bits (238), Expect = 6.240e-24
Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    6 EVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKEE 82
            E +  KM  T EEMV++R+P+ YRD CAH LIPLN CR+  FYLP++CE+ERH YEKCQY+  M R+ +M+ I +EE
Sbjct:    4 EGSSKKMIATQEEMVESRVPLAYRDQCAHLLIPLNKCRQSEFYLPWKCENERHVYEKCQYELVMERMLKMQKIREEE 80          
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A498I6P2_MALDO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=11 Tax=Amygdaloideae TaxID=171637 RepID=A0A498I6P2_MALDO)

HSP 1 Score: 96.3 bits (238), Expect = 6.600e-24
Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    5 AEVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKEE 82
            AE    KM  T  EMV+NR+PI YRD CAH LIPLN CR+  FYLP++CE+ERH+YEKC+Y+  M R+  M+ I +EE
Sbjct:    3 AEGTSKKMIATQAEMVENRVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLAMQKIREEE 80          
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A6A5N050_LUPAL (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=Lupinus TaxID=3869 RepID=A0A6A5N050_LUPAL)

HSP 1 Score: 96.3 bits (238), Expect = 6.600e-24
Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    6 EVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKEE 82
            E +  KM  T EEMVQ R+P+ YRD CAH LIPLN CR+  FYLP++CE+ERH+YEKC+Y+  M R+ +MK I +E+
Sbjct:    4 EGSSKKMIATQEEMVQARVPLAYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVMERMLQMKKIREEQ 80          
BLAST of Gchil4143.t1 vs. uniprot
Match: A9P2C2_PICSI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P2C2_PICSI)

HSP 1 Score: 95.9 bits (237), Expect = 8.860e-24
Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    6 EVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKE 81
            E+A  K   + E+MV+ R+P+ YRD CAH LIPLN CR K +YLP++CE+ERH YEKC+Y+ +M RV +M+ I KE
Sbjct:    6 EIAPKKQIASQEQMVEARVPLGYRDQCAHLLIPLNQCRVKEYYLPWKCENERHTYEKCEYELFMERVRKMEKIRKE 81          
BLAST of Gchil4143.t1 vs. uniprot
Match: A0A8H7EJU0_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EJU0_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 9.670e-24
Identity = 40/72 (55.56%), Postives = 56/72 (77.78%), Query Frame = 0
Query:   11 KMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLPFRCEDERHAYEKCQYDQYMRRVNEMKAIVKEE 82
            +M+ T +EM ++RIP++YRD+CAH L PLN CR + FYLP++CE+ERH YEKCQYD Y RR+  ++   +EE
Sbjct:    6 EMKATQQEMGKSRIPLEYRDYCAHLLAPLNKCRGETFYLPWKCENERHEYEKCQYDDYKRRMRALQKAKEEE 77          
The following BLAST results are available for this feature:
BLAST of Gchil4143.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1L6_9FLOR8.140e-5486.32NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
R7QRG1_CHOCR1.440e-3975.58NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A498HHD7_MALDO3.280e-2457.69NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A2G5B5U9_COERN3.770e-2453.75NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A090M4F5_OSTTA4.420e-2463.24NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A6P4B6L7_ZIZJJ6.240e-2457.14NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A498I6P2_MALDO6.600e-2457.69NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A6A5N050_LUPAL6.600e-2457.14NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A9P2C2_PICSI8.860e-2455.26NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A8H7EJU0_9FUNG9.670e-2455.56NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..99
NoneNo IPR availablePANTHERPTHR20900:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 7coord: 8..93
NoneNo IPR availablePROSITEPS51808CHCHcoord: 29..71
score: 11.100986
IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7PFAMPF05676NDUF_B7coord: 14..75
e-value: 2.4E-28
score: 97.6
IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7PANTHERPTHR20900NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNITcoord: 8..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:993510..994076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4143.t1Gchil4143.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 993510..994076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4143.t1 ID=Gchil4143.t1|Name=Gchil4143.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=100bp
MGGNAEVAEAKMQCTDEEMVQNRIPIDYRDFCAHKLIPLNNCRRKNFYLP
FRCEDERHAYEKCQYDQYMRRVNEMKAIVKEERRAARIARDEAEAASQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008698NDUB7