Gchil4103.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4103.t1
Unique NameGchil4103.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length173
Homology
BLAST of Gchil4103.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 209 bits (533), Expect = 3.950e-62
Identity = 99/166 (59.64%), Postives = 124/166 (74.70%), Query Frame = 0
Query:    1 MWSGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDI 166
            MWSG+L  +++T HRIDL    +P    PYR G + R + + E++ M KAQVIEP     SEWASP+ LVAK DGS RF VDYR+LN +T RDSYP+P MD+C+DSLG+A +FTTLD NSGYWQI + ++ R  T FT+HEGL+ F RMPFGL+NAPATFQR +DI
Sbjct:  348 MWSGKLGQVQSTNHRIDLIPGQKPVHCQPYRAGPRARAVESAEIQRMLKAQVIEPAT---SEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRQEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDI 510          
BLAST of Gchil4103.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 209 bits (532), Expect = 1.340e-61
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 0
Query:    1 MWSGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDIIPSRVK 172
            MW G L  I+AT HRI L   ++P   HPYR G K R++   E+E M KA VIEP     SEWASP+ LV K DGS+RF VDYRKLN +T +D+YP+P MD+ +DSLG+A +F+TLD NSGYWQI + E+ R  T FT+H G +RF RMPFGL NAPATFQR +DII SRVK
Sbjct:  338 MWDGSLGEIKATKHRIQLIPGSKPVHSHPYRAGPKAREMERQEVERMLKADVIEPAC---SEWASPVVLVPKPDGSLRFCVDYRKLNSITVKDTYPLPRMDESIDSLGDAAIFSTLDCNSGYWQIPINEEDRDKTTFTSHVGAYRFIRMPFGLCNAPATFQRSLDIILSRVK 506          
BLAST of Gchil4103.t1 vs. uniprot
Match: UPI001E1DEA69 (uncharacterized protein LOC123544193 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA69)

HSP 1 Score: 202 bits (515), Expect = 1.060e-59
Identity = 96/172 (55.81%), Postives = 122/172 (70.93%), Query Frame = 0
Query:    1 MWSGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDIIPSRVK 172
            MW G L T+ AT+HRI++   A+P    PYR G + R    +E++ M    VIEP      EWASP+ LV K DGS+RF VDYR+LN +T  D+YP+P MD+C+DSLG+AVVFTTLD NSGYWQI +  + R  T FT+H G++RF R+PFGL+NAPATFQR +DII S VK
Sbjct:  349 MWDGHLGTVAATSHRIEVTAGAKPVHCQPYRAGSRARSAEKEEIDRMLAEHVIEPAT---CEWASPIVLVPKPDGSLRFCVDYRRLNAITVPDTYPLPRMDECIDSLGDAVVFTTLDCNSGYWQIPVHPEDRDKTTFTSHYGIYRFLRLPFGLRNAPATFQRAIDIILSGVK 517          
BLAST of Gchil4103.t1 vs. uniprot
Match: UPI001E1D9CF0 (uncharacterized protein LOC123544487 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9CF0)

HSP 1 Score: 185 bits (470), Expect = 2.000e-54
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 0
Query:    1 MWSGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQR 162
            MW GRL  I   +HR+       P    PYR G   RK++ +E++ M K++VIEP     S W++P+ L+ K DGSIRF VDYR+LN VT+ DSY +P +DDCLDSLGEA  FTTLD NSGYWQI ++ + R  T FT+H GL+RF RMPFGLK APATF +
Sbjct:  223 MWDGRLGKIDTVSHRVPTTGP--PVASQPYRAGPSSRKLIDEEIQRMLKSEVIEP---TSSPWSAPIVLIPKPDGSIRFCVDYRRLNAVTENDSYALPRIDDCLDSLGEAQFFTTLDANSGYWQIEVSPEDRDKTTFTSHRGLYRFKRMPFGLKTAPATFPK 379          
BLAST of Gchil4103.t1 vs. uniprot
Match: A0A816W2C7_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816W2C7_9BILA)

HSP 1 Score: 169 bits (428), Expect = 1.220e-47
Identity = 85/170 (50.00%), Postives = 117/170 (68.82%), Query Frame = 0
Query:    3 SGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDIIPSRVK 172
            +GR NT++   H+I L+++++     PYR     R+++   +E M +  +IEP   ++S WASP+ L  KKDGS+RF VDYRKLN VT RD+YPIP +DD LDSL EA   +TLD +SGYWQ+ + +D++  T F TH GL+ F  MPFGL NAPATFQR MDI+ + +K
Sbjct:  246 NGRTNTLK---HQITLKSESKSFNSPPYRYAPIRRQVIEQNIEEMLEEGIIEP---SKSPWASPVVLAPKKDGSMRFCVDYRKLNSVTTRDAYPIPRIDDTLDSLQEAKFISTLDLHSGYWQVEMDKDSKEKTAFITHRGLYEFNVMPFGLTNAPATFQRLMDIVLAGLK 409          
BLAST of Gchil4103.t1 vs. uniprot
Match: UPI001E1D2C1D (uncharacterized protein LOC123544039 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C1D)

HSP 1 Score: 174 bits (442), Expect = 2.170e-47
Identity = 87/172 (50.58%), Postives = 110/172 (63.95%), Query Frame = 0
Query:    1 MWSGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDIIPSRVK 172
            +W G L  I A  H I       P    PYR G   R  +  E++ M++  VIEP    +  WASP+ L+ K DGS+RF VDYR+LN VT +DSY +P +DD LDSLG A  F+TLD NSGYWQI++    R  T FTTH GL+RF R+PFGL +APATFQR +D+I S V+
Sbjct:  585 LWDGHLGNIDAVQHHIPTTGP--PLATQPYRVGPASRDSIDAELQRMKEMDVIEPA---EGPWASPVVLIPKPDGSVRFCVDYRRLNAVTTKDSYALPRVDDSLDSLGGAQYFSTLDANSGYWQISVNPADRDKTTFTTHRGLYRFKRLPFGLVSAPATFQRAIDVILSTVR 751          
BLAST of Gchil4103.t1 vs. uniprot
Match: A0A814U414_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A814U414_9BILA)

HSP 1 Score: 162 bits (409), Expect = 3.180e-46
Identity = 80/169 (47.34%), Postives = 111/169 (65.68%), Query Frame = 0
Query:    4 GRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDIIPSRVK 172
            GR N I+   H ID+Q   +P+   PYR      +++   ++ M +  +I P   ++S WASP+ L  KKDGS+RF +DYRKLN +T RD+YPIP +DD L +L ++  F+TLD  +GYWQ+ +   +RALT F TH+GLF  T MPFGL NAP TFQR MDI+ + +K
Sbjct:   73 GRTNKIQ---HHIDIQPGNKPRNSAPYRYSPARHQVIGSNLKEMLQEGIITP---SKSPWASPVILAPKKDGSMRFCIDYRKLNAITTRDAYPIPRIDDTLYALHQSQFFSTLDLRAGYWQVEMDTASRALTAFATHKGLFECTVMPFGLTNAPGTFQRLMDIVLAGLK 235          
BLAST of Gchil4103.t1 vs. uniprot
Match: A0A6G5A8Y6_RHIMP (Putative tick transposon (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5A8Y6_RHIMP)

HSP 1 Score: 164 bits (415), Expect = 3.260e-46
Identity = 82/162 (50.62%), Postives = 107/162 (66.05%), Query Frame = 0
Query:    6 LNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDII 167
            L+   A  HRID    A P  Q PYR     R+++ ++++ M K  +IEP   + S WASP+ LV KKDGSIRF VDYR+LN +T++D YP+P +DD LD L  A  F++LD  SGYWQ+ +AE  R  T F T +GL+ FT MPFGL NAPATF+R MD +
Sbjct:   99 LSRTSAVVHRIDTGQQA-PLRQRPYRVSSAERRVIDEQVDDMLKRGIIEP---SNSPWASPVVLVRKKDGSIRFCVDYRRLNKITRKDVYPLPRIDDALDCLQGAEFFSSLDLRSGYWQVPMAEGDRPKTAFVTPDGLYEFTVMPFGLCNAPATFERMMDTV 256          
BLAST of Gchil4103.t1 vs. uniprot
Match: A0A816MFI3_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816MFI3_9BILA)

HSP 1 Score: 169 bits (427), Expect = 3.430e-46
Identity = 85/170 (50.00%), Postives = 116/170 (68.24%), Query Frame = 0
Query:    3 SGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDIIPSRVK 172
            +GR NT++   H+I L+++++     PYR     R+++   +E M +  +IEP   ++S WASP+ L  KKDGS+RF VDYRKLN VT RD+YPIP +DD LDSL EA   +TLD  SGYWQ+ + +D++  T F TH GL+ F  MPFGL NAPATFQR MDI+ + +K
Sbjct:  246 NGRTNTLK---HQITLKSESKSFNSPPYRYAPIRRQVIEQNIEEMLEEGIIEP---SKSPWASPVVLAPKKDGSMRFCVDYRKLNSVTTRDAYPIPRIDDTLDSLQEAKFISTLDLRSGYWQVEMDKDSKEKTAFITHRGLYEFNVMPFGLTNAPATFQRLMDIVLAGLK 409          
BLAST of Gchil4103.t1 vs. uniprot
Match: A0A820TWQ0_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A820TWQ0_9BILA)

HSP 1 Score: 161 bits (407), Expect = 1.650e-45
Identity = 83/161 (51.55%), Postives = 104/161 (64.60%), Query Frame = 0
Query:   12 TTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKAQVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHMDDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMPFGLKNAPATFQRGMDIIPSRVK 172
            T H I+LQ   +P    PYR     + IV  ++E M +A  I P   ++S WASP+ L  KKDGS+RF VDYRKLN  T R +YP+P +DD LDSL EA   +TLD  SGYWQ+ +  D+R  T F TH GL+ F  MPFGL NAPATFQR MDI+ + +K
Sbjct:    2 TKHTIELQPGKQPSNMQPYRLPPSKKAIVDKQLEEMLEAGQIAP---SRSPWASPIVLSPKKDGSLRFCVDYRKLNASTIRTAYPMPRVDDTLDSLREAKYISTLDLRSGYWQVEIDPDSRDKTAFITHRGLYEFLVMPFGLSNAPATFQRLMDIVLAGIK 159          
The following BLAST results are available for this feature:
BLAST of Gchil4103.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1DB02D3.950e-6259.64uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
UPI001E1D3E381.340e-6159.30uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
UPI001E1DEA691.060e-5955.81uncharacterized protein LOC123544193 n=1 Tax=Merce... [more]
UPI001E1D9CF02.000e-5454.32uncharacterized protein LOC123544487 n=1 Tax=Merce... [more]
A0A816W2C7_9BILA1.220e-4750.00Hypothetical protein n=1 Tax=Rotaria magnacalcarat... [more]
UPI001E1D2C1D2.170e-4750.58uncharacterized protein LOC123544039 n=1 Tax=Merce... [more]
A0A814U414_9BILA3.180e-4647.34Hypothetical protein n=1 Tax=Rotaria magnacalcarat... [more]
A0A6G5A8Y6_RHIMP3.260e-4650.62Putative tick transposon (Fragment) n=1 Tax=Rhipic... [more]
A0A816MFI3_9BILA3.430e-4650.00Hypothetical protein n=6 Tax=Rotaria magnacalcarat... [more]
A0A820TWQ0_9BILA1.650e-4551.55Hypothetical protein (Fragment) n=1 Tax=Rotaria ma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 13..155
e-value: 1.5E-51
score: 176.7
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 40..166
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 40..166
NoneNo IPR availableCDDcd01647RT_LTRcoord: 52..167
e-value: 1.15079E-53
score: 166.232
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 71..171
e-value: 5.5E-12
score: 45.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 51..172
score: 9.900567
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 95..167
e-value: 1.5E-51
score: 176.7
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 3..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:750358..750876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4103.t1Gchil4103.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 750358..750876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4103.t1 ID=Gchil4103.t1|Name=Gchil4103.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=173bp
MWSGRLNTIRATTHRIDLQNDARPQFQHPYRTGLKGRKIVADEMEMMRKA
QVIEPVPPNQSEWASPLFLVAKKDGSIRFFVDYRKLNVVTKRDSYPIPHM
DDCLDSLGEAVVFTTLDTNSGYWQIALAEDARALTIFTTHEGLFRFTRMP
FGLKNAPATFQRGMDIIPSRVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf