Gchil4038.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4038.t1
Unique NameGchil4038.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length574
Homology
BLAST of Gchil4038.t1 vs. uniprot
Match: A0A2V3IRW5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW5_9FLOR)

HSP 1 Score: 451 bits (1159), Expect = 8.090e-149
Identity = 274/621 (44.12%), Postives = 366/621 (58.94%), Query Frame = 0
Query:    8 ISHGFTAIDARIVLRPTPPPCPPLSPPPYRLNLLAAHDDILYIPASPNEITRLCIRRSNGPQLLNLPSVTIAPPTVVNNVRVAPFSFPPSTHSLVLTAGSEQNPNSGKLVFLPLPSYSASLKLAPPVARSYSTRTHSAWGLAIHPFLAQIAISTNSFRSVVYSFRPSYSSPRPRLLHPDDP------------QQIPLVHVSPPITAPPADVD--------------------------QLHALFYEHRFL--LRQLHRNNLPCVSFHRHGDMLACASIDCTFSVQSLQSSFRPWVYQSDQPVSSNFNYSRMRERCWQTHWILPSTVQYVSKEDDVWKFQSFQRKIRHSWDLT---LSPMASIPSIFNRHDYAVRRMQTKVFYDDNQLLEDSSQSHPTTLPSHSVSFQELEN-----AFDVSSFFDKPTESQRQASVYTINPKPFYAKKAPVFAPDELDSYAQGHLLLVCYERKLELHHV----PVNRDCNAMNECSAPD---VQKLDTMSLDATLGFQIMFTNVIEVAPLSLLVCTAIDTGILLVRILRATSESSIDKPSLLIERVISMNIAVAGTCVIERPGDNIAEFCAELWIFTIDGCLQCWELSQDGYAIDISTPL 573
            I    ++I A +VL PT PP P L P  YRLN+LAAHDD+LY+ AS NEITRL I RS G  L  LPS TI+PPTV+NNVRVAPFS   S+H L+LT G+E    SG+LV LPL S       +PPVA+S+ TRT+SAWGL +HPFL +IA+S+NS    +Y+FR  +  P   L H   P            QQ  +V  + P                                   Q H   Y  R+     ++H NN+PCVSFH+ G +LA ASIDCTF+V  + +S     YQS  PV+ +  ++   ERCWQTHW+ PSTVQ V +   VW   S+Q     +W      +  +  I  +  R+  AVRR QTKVFYDD QLLE      PT    HS S Q L +      FD+++ FD+PT SQ + S+   N +PF  K +     D  D  ++G L+LVC+E+ +ELHH+      + D N +++ +AP     +K+D + L+     Q+M T +IE+APLSLLVC A++TG+L VRILR+ + +S+ +PSL +ERVI ++ A+ GTCVIERPG  +AEFCAELW+FT DG LQCWELS+D +A+DIS P+
Sbjct:   12 IPSSLSSIRADLVLEPTRPPGPQLRPRFYRLNVLAAHDDVLYLAASNNEITRLKIHRSRGIVLQQLPSSTISPPTVINNVRVAPFSTHTSSHVLLLTGGNENQSASGRLVLLPLTSAGDP---SPPVAKSFRTRTNSAWGLDVHPFLPRIAVSSNSQVIFIYTFR--HPQPVTALQHNTQPAAHSAHNEALANQQQLIVPPNQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYHLDDYFERYQPHAARVHLNNIPCVSFHKQGHLLASASIDCTFAVYDMTTSNLVSSYQSGIPVARDRYHTHTEERCWQTHWVSPSTVQNVDEHHKVWSLHSWQSSSARTWAAPPNFVCELGPISPLLTRYGNAVRRAQTKVFYDDRQLLE------PTHGSPHSES-QNLRSPDSGPVFDINAVFDEPTASQHEVSIEFENKQPFALKTS--ITEDTPDLLSEGELMLVCFEKSIELHHILPPSDPSPDANGVSQ-AAPQRRRARKIDRIRLNTRTCRQLMVTQIIEIAPLSLLVCIAVNTGVLFVRILRSCTPTSLSEPSLFVERVIKID-AICGTCVIERPGSVLAEFCAELWVFTADGNLQCWELSRDEFALDISKPV 616          
The following BLAST results are available for this feature:
BLAST of Gchil4038.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRW5_9FLOR8.090e-14944.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 502..573
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 480..501
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:204850..206571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4038.t1Gchil4038.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 204850..206571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4038.t1 ID=Gchil4038.t1|Name=Gchil4038.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=574bp
MSSSSTAISHGFTAIDARIVLRPTPPPCPPLSPPPYRLNLLAAHDDILYI
PASPNEITRLCIRRSNGPQLLNLPSVTIAPPTVVNNVRVAPFSFPPSTHS
LVLTAGSEQNPNSGKLVFLPLPSYSASLKLAPPVARSYSTRTHSAWGLAI
HPFLAQIAISTNSFRSVVYSFRPSYSSPRPRLLHPDDPQQIPLVHVSPPI
TAPPADVDQLHALFYEHRFLLRQLHRNNLPCVSFHRHGDMLACASIDCTF
SVQSLQSSFRPWVYQSDQPVSSNFNYSRMRERCWQTHWILPSTVQYVSKE
DDVWKFQSFQRKIRHSWDLTLSPMASIPSIFNRHDYAVRRMQTKVFYDDN
QLLEDSSQSHPTTLPSHSVSFQELENAFDVSSFFDKPTESQRQASVYTIN
PKPFYAKKAPVFAPDELDSYAQGHLLLVCYERKLELHHVPVNRDCNAMNE
CSAPDVQKLDTMSLDATLGFQIMFTNVIEVAPLSLLVCTAIDTGILLVRI
LRATSESSIDKPSLLIERVISMNIAVAGTCVIERPGDNIAEFCAELWIFT
IDGCLQCWELSQDGYAIDISTPL*
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