Gchil3905.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
|
Overview
Homology
BLAST of Gchil3905.t1 vs. uniprot
Match: A0A2V3IT27_9FLOR (Zinc finger CCCH domain-containing protein 41 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT27_9FLOR) HSP 1 Score: 724 bits (1870), Expect = 4.280e-252 Identity = 482/755 (63.84%), Postives = 551/755 (72.98%), Query Frame = 0
Query: 1 MATSARAWSVAKLKELNFEGDAEALGQYIDAVIENNREAENGDPDLLRAQVTRDLDDFLADSAAAAFVDALMRHLSPPAPASXXXXXXXXXRAPASANGAPPPPNHPSHARPSHVDDKLRQPLS--ETRRRSPRRDRPEPER--------QDAAQRRSDXXXXXXXXXTVMQRLGDRAEDPREQHKRQRARDPKPLRDPRDTRQQPRLARDRDSDRERDRPNVASRAPRSTSGDVWDRLGSRNVKRPREEPMDMRDRREADERDAKHRRGPDGGRRRSDSFDRQRMPNDRLRRDDRAPRITTPPYDQNGKAPPPWPPNLVGPMSLMPPPFP---GMLPPVPPLLPNMGGGGRGRGGYRARDHGRP-LPQNGVSNP--ANSKYKHFILIAMHIPDDKMMIGPIYAFFQRFGILRDVQRFLPDKAFILFDRRESAQHALSSVDAVMGNRHIRLRWARESDFAEAGLRLTDDGTLVEEEQAKK-----HSREEEEKAPLTPTKVEVRATPPDHRARYDMEKEKKIRQAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQQLLARQHEIFAKIPCANDKEKLKMKNELVAIQEETLGVQKELKPKPLIAPKAEAMKRFAPASSVYRVDNRPKQVLVRGAKDDVVPDSAASAFHDTERAKQFGKNEWLLTFLSRRAAESAIRAQKVLKRCFGNEASAAIVSSAMLETIRQSNEV-HTNTAAHSSPPDV-KADVSMMDDNVKPRSASAVAE 732
MA SARAWSVAKL+ELNFEGDAEALGQYIDAVIENNR+AENGDPDLLR+QVTRDL DFLA+SAA +FVDALMRHLSP + P +A P P+ RPSHVD+KLRQPLS E RRRSPRRDR E +R D A RR D TVMQRLGDR ED RE HKRQR DPK R +RQ RL R+R +P R R SGD+ DRLGSRN KRPRE+P D RDRR+ DERD+KHRR D RRRSD++DRQR+P+DR RRDDR IT P YDQNGKAPPPWPP +V M G+LPPVPPL+P MG RGRGG+R+R+ GR + +NP ANSKY+HFIL+A IP+DKMMIGPIYAFFQRFG+L+DV RF PDKAFILFDRR+SAQHALSSVDAVMGNRHI+L WAR+SDFAEAGLRLTD+GTLVE+E KK H + R TP + + R + EKK+RQ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KQQLLARQHEIFAKI AND+EKL+MKNELVA+QEET+ VQ++LKPKP+ APK + KRF + S YRVDNRPKQVLVRGAK+DV+ D AASAFHDTERA+ FGKNEWLLTFLSRRAAESAIRAQKVLKR FG +A+A I+S AMLE + + V T+ + SPP V KAD+ MM+ + K ++ASAVA+
Sbjct: 1 MAASARAWSVAKLRELNFEGDAEALGQYIDAVIENNRDAENGDPDLLRSQVTRDLQDFLAESAAGSFVDALMRHLSP---------NSTSVKPPQTAAEPKPEPS-----RPSHVDEKLRQPLSSSEPRRRSPRRDRAEKQRLDNDSRDRSDPAHRRVDRVDRRPNRQTVMQRLGDRVEDLRE-HKRQRTWDPKSPRXXXXSRQPNRLVRER-------QPVQGPRPNRLNSGDIRDRLGSRNPKRPREDPNDNRDRRDLDERDSKHRRQTDSARRRSDNYDRQRLPDDRPRRDDRPGHITPPRYDQNGKAPPPWPPGIVAQMGXXXXXXXXPHGILPPVPPLIPGMGT--RGRGGFRSRESGRAAMSHTAGNNPSAANSKYRHFILVAKAIPEDKMMIGPIYAFFQRFGMLKDVVRFPPDKAFILFDRRDSAQHALSSVDAVMGNRHIKLSWARDSDFAEAGLRLTDEGTLVEDEHPKKPANQHHXXXXXXXXXXXXXXXDPRPTPSEQKLRAESG-EKKVRQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARKQQLLARQHEIFAKISSANDEEKLRMKNELVAVQEETIQVQQQLKPKPVAAPKPDTAKRFTHSPSAYRVDNRPKQVLVRGAKNDVLADGAASAFHDTERAESFGKNEWLLTFLSRRAAESAIRAQKVLKRTFGTDATAVIISPAMLEAAQSTASVADTDATKNVSPPAVVKADMKMMEVSDKAQNASAVAK 730
BLAST of Gchil3905.t1 vs. uniprot
Match: R7QP76_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP76_CHOCR) HSP 1 Score: 137 bits (345), Expect = 9.130e-31 Identity = 119/372 (31.99%), Postives = 174/372 (46.77%), Query Frame = 0
Query: 350 GRPLPQNGVSNPANSKYKHFILIAMHIPDDKMMIGPIYAFFQRFGILRDVQRFLPDKAFILFDRRESAQHALSSVDAVMGNRHIRLRWARESDFAEAGLRLTDDGTLVEEEQAKKHSREEEEKAPLTP-------------TKVEVRATPPDHRARYDMEKEKK-IRQAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQQLLARQHEIFAKIPCANDKE-KLKMKNELVAIQEETLGVQKELKPKPLIAPKAEAMKRFAPASSV-------------------YRVDNRPKQVLVRGAKDDVVPDSAASAFHDTERAKQFGKNEWLLTFLSRRAAESAIRAQKVLKRCFGNEASAAIVSSA 687
GR +G + A + ++F+L ++P+DK+ + I FF+ +G +VQ PD+AFI++ RE AQ A SVDA+MGNRHIRL WA D+ +GL LTD+G L + ++ +R++ + E R+ A E EK+ +AAEE K+QL+ Q +FA + A D+ KL++ + AI + V L PK A + R A + S + VDNRPK + + GAK DVV ++A S FH+T A++ G WLL F +RRAAESA+RA+ LKR FG A + IV+ A
Sbjct: 49 GRGPSADGQAAQAGGRKQYFVLAMRNVPEDKLKLPHILKFFENYGTPDNVQLVTPDRAFIIYASREPAQAATKSVDAIMGNRHIRLGWATAQDYDVSGLELTDEGVL-QPSTGRRKTRDDRRGXXXXXXXXRNDGNRGEGGARKESRSAAHGMNAVAKKEAEKQEAAKAAEEDLRKKRAAIAEARAKQDEVKTQLQAR----------KKQLVDEQKVLFASMATAGDQAAKLELFRKAKAIDSQLEQVVSGLNPK---AGAVASTARVAASPSARGGASGRXXXXXXXGRFEGFSVDNRPKTLQIMGAKADVVVETAISVFHETLSAEKVGAF-WLLNFPTRRAAESAMRARGPLKRGFGAAAMSQIVAGA 405
BLAST of Gchil3905.t1 vs. uniprot
Match: A0A1X6PK71_PORUM (RRM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PK71_PORUM) HSP 1 Score: 71.6 bits (174), Expect = 4.360e-9 Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 0
Query: 336 GGGRGRGGYRARDHGRPLPQNGVSNPANSKYKHFILIAMHIPDDKMMIGPIYAFFQRFGILRDVQ---RFLPDKAFILFDRRESAQHALSSVDAVMGNRHIRLRWARESDFAE 445
GGG R G R H ++ L+ ++P DK+ + I ++F RFG + +Q PD+A + F +SA A SVDAVMGNRH+RL WA+++D+ +
Sbjct: 491 GGGGDRSGSRVGGHNAXXXXXXXXXXXXNRSFPSALVLKNVPADKLHVNAILSYFSRFGAVSGIQLRPSTRPDRAVVEFATPDSAGRAYESVDAVMGNRHVRLHWAQKNDYTD 603
BLAST of Gchil3905.t1 vs. uniprot
Match: A0A7S0ZK21_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK21_9RHOD) HSP 1 Score: 68.6 bits (166), Expect = 1.950e-8 Identity = 41/119 (34.45%), Postives = 67/119 (56.30%), Query Frame = 0
Query: 332 PNMGG-GGRGRGGYRARDHGRPLPQNGVSNPANSKYKHFILIAMHIPDDKMMIGPIYAFFQRFGILRDVQRF---LPDKAFILFDRRESAQHALSSVDAVMGNRHIRLRWARESDFAEA 446
P+ GG GG GG R R+ P P +G + L+ ++PDDK+ I I +F++FG + ++Q PD+A++ F ++ AQ A+ S++A+MGNRH+R+ WA +A
Sbjct: 276 PDRGGRGGGXXGGLRDRN---PRPVDGEGSERT-------LVVRNLPDDKLNIMEIGEWFKQFGTITNIQLVPAEKPDRAYVEFSAKDMAQAAMESIEAIMGNRHVRIFWAHRDSKVQA 384
BLAST of Gchil3905.t1 vs. uniprot
Match: A0A4Y7JNN5_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JNN5_PAPSO) HSP 1 Score: 63.2 bits (152), Expect = 1.600e-6 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 371 LIAMHIPDDKMMIGPIYAFFQRFGILRDVQRFLPD---KAFILFDRRESAQHALSSVDAVMGNRHIRLRWARESDFAE 445
L HIP + I P+ + FQ+FG++ D+ F+ KA+I F +RESA+ A+SS DAV+GNR IRL WA + E
Sbjct: 561 LYVSHIPPKENKIEPLLSHFQKFGVVDDI--FITTDRKKAYIQFSKRESAEAAISSPDAVLGNRFIRLSWAYKDRLLE 636 The following BLAST results are available for this feature:
BLAST of Gchil3905.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil3905.t1 ID=Gchil3905.t1|Name=Gchil3905.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=733bpback to top |