Gchil3870.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3870.t1
Unique NameGchil3870.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length144
Homology
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A2V3INQ2_9FLOR (Putative Golgi transport protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ2_9FLOR)

HSP 1 Score: 249 bits (635), Expect = 8.430e-82
Identity = 132/143 (92.31%), Postives = 137/143 (95.80%), Query Frame = 0
Query:    1 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV 143
            MSSPFAITDVRKIGIGLTAFGLAFSVLGVAL FDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFF GMA VLFGLPV GM +ELFGFVNLFGDFFPVVIAFLRRAPV G+LLGLP+VRNVADRLAGS++KLPV
Sbjct:   87 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAVVLFGLPVLGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGRLLGLPIVRNVADRLAGSSSKLPV 229          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A1X6PC43_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC43_PORUM)

HSP 1 Score: 172 bits (437), Expect = 5.640e-53
Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 0
Query:    9 DVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV 143
            D +KIGIGLT+FGLAF +LGV LLFDK LLAMG++L+LAGV +IIG  RS RFFFQ++KAK S  FF GM  VL G PV GMG+E+FGF+NLFGDFFP+ IAFLRR P+ G  + LP VR V D+LA S  KLPV
Sbjct:    3 DFKKIGIGLTSFGLAFMILGVLLLFDKALLAMGDLLFLAGVTLIIGVQRSYRFFFQRKKAKGSALFFGGMLLVLVGWPVIGMGVEVFGFINLFGDFFPIAIAFLRRMPIVGNFMTLPGVRVVVDKLAASPPKLPV 137          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A7S0EAX9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EAX9_9EUKA)

HSP 1 Score: 159 bits (403), Expect = 2.060e-47
Identity = 84/138 (60.87%), Postives = 101/138 (73.19%), Query Frame = 0
Query:    6 AITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV 143
            A+ D RKIGIGLT  GL F VLG+ + FDKGLLAMGN+L+LAGVMMIIG  ++ RFFFQKRK K +  F  G+  VL G PV GMG+E FGF+NLFGDFFP+ + FLR  PV G LL LP++R+V DR      +LPV
Sbjct:   30 AMDDYRKIGIGLTGAGLLFMVLGMMMFFDKGLLAMGNILFLAGVMMIIGMNKTFRFFFQKRKLKGTACFLGGIGLVLLGWPVIGMGVEGFGFLNLFGDFFPIALGFLRNMPVVGSLLNLPIIRSVTDRFV-QKARLPV 166          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A5J4YNX5_PORPP (Vesicle transport protein GOT1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNX5_PORPP)

HSP 1 Score: 154 bits (390), Expect = 9.550e-46
Identity = 80/140 (57.14%), Postives = 103/140 (73.57%), Query Frame = 0
Query:    1 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTK 140
            M+ P  I+D +KIGIGLT FG+ F+ LGV LLFDK LLAMGNV++L+GV +IIG  R+VRFFF +++ K S FFF GM  VL G P+ G+ +E +GFVNLFGDFFPV + F++  PV G +L +P V+ V DRL G  TK
Sbjct:    1 MAEPM-ISDFKKIGIGLTGFGMGFTFLGVLLLFDKSLLAMGNVMFLSGVGLIIGAQRAVRFFFTRKRYKGSAFFFGGMTLVLVGWPIIGICLEAWGFVNLFGDFFPVALTFMQNMPVIGNILAMPAVQQVVDRLMGLNTK 139          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A7S2ZZF7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZF7_9RHOD)

HSP 1 Score: 154 bits (389), Expect = 1.120e-45
Identity = 78/137 (56.93%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    7 ITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV 143
            I D +KIGIGLTA GL F+ LG+ L+FD  L+AMGN+L+L+GV ++IGP RSV FFFQK+K K S+ FF G+A VL   PV G+ +E FGF+NLFGDFFP+ + FLRR P+ G LL LP + ++ D+   S+ KLPV
Sbjct:    2 IQDFKKIGIGLTACGLGFTFLGIILIFDAALIAMGNILFLSGVTLVIGPQRSVTFFFQKKKLKGSIVFFVGIALVLIKWPVIGILVESFGFINLFGDFFPIAVTFLRRLPIIGNLLSLPYISDLVDKFVASS-KLPV 137          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A7S3W5F4_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W5F4_9SPIT)

HSP 1 Score: 153 bits (386), Expect = 3.210e-45
Identity = 84/138 (60.87%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    6 AITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV 143
            A+ D RKIG+GLT  G+ F VLGV L FDKGLLAMGN+L+LAGV +IIGP    RFFFQKRK + +  F  G+  VL G PVFGM IELFGF+NLFGDFFPVV+ FLR  P+ G +L LP VR   DR      +LPV
Sbjct:    1 AMDDYRKIGLGLTCAGVLFLVLGVMLFFDKGLLAMGNILFLAGVSLIIGPRGVFRFFFQKRKVRGTSCFLGGIFLVLVGWPVFGMAIELFGFLNLFGDFFPVVLGFLRNLPIVGNVLALPPVRAFTDRFVAKA-RLPV 137          
BLAST of Gchil3870.t1 vs. uniprot
Match: UPI001F4FD684 (vesicle transport protein GOT1B n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FD684)

HSP 1 Score: 153 bits (386), Expect = 3.530e-45
Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTK 140
            F ITDV+KIG+GL  FG+AF  LGV LLFDKGLLA+GN+L+++G+  +IG  R+ RFFFQ+ K +ASV FF G+  VLFG P+ GM IE +GFV LF  FFPV I FLRR PV G +L LP +R + D+LAG +++
Sbjct:    2 FEITDVQKIGVGLAGFGIAFLFLGVLLLFDKGLLALGNILFISGLACVIGLERTFRFFFQRHKVRASVAFFAGILVVLFGWPLVGMLIETYGFVLLFSGFFPVAINFLRRVPVLGTVLNLPGIRGIIDKLAGDSSR 137          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A1S3DJP2_DIACI (vesicle transport protein GOT1B isoform X2 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DJP2_DIACI)

HSP 1 Score: 152 bits (383), Expect = 1.010e-44
Identity = 80/134 (59.70%), Postives = 100/134 (74.63%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGST 138
            F ITDV+KIG+GL  FG+AF  LGV LLFDKGLLA+GNVL+++G+  +IG  R+ RFFFQ+ K K S+ FF G+  VLFG P+ GM IEL+GF +LF  FFPV I FLRR PV G +L LP ++ + DRLAG T
Sbjct:    2 FEITDVQKIGVGLAGFGIAFLFLGVFLLFDKGLLAIGNVLFISGLACVIGFERTFRFFFQRHKVKGSLCFFGGIFVVLFGWPLIGMCIELYGFYHLFSGFFPVAINFLRRIPVLGMMLNLPGIKGILDRLAGDT 135          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A6J1SRK0_FRAOC (vesicle transport protein GOT1B n=2 Tax=Thripinae TaxID=153976 RepID=A0A6J1SRK0_FRAOC)

HSP 1 Score: 150 bits (380), Expect = 2.880e-44
Identity = 78/139 (56.12%), Postives = 102/139 (73.38%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV 143
            F I+DV+KIG+GL AFG++F  LGV L+FDKGLLA+GN+L+++G+  +IG  R+ RFFFQ+ K KAS+ FF G+A VLFG P+ GM +E +GFV LF  FFPV I FLRR PV G  L  P VR + D+LAG + +  V
Sbjct:    2 FEISDVQKIGVGLAAFGISFLFLGVILIFDKGLLAIGNILFISGLACVIGFERTFRFFFQRHKTKASIAFFGGIAVVLFGWPLIGMCLETYGFVLLFSGFFPVAINFLRRVPVLGTFLNFPGVRGIVDKLAGDSNRTTV 140          
BLAST of Gchil3870.t1 vs. uniprot
Match: A0A0D2X527_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X527_CAPO3)

HSP 1 Score: 149 bits (376), Expect = 1.030e-43
Identity = 79/133 (59.40%), Postives = 101/133 (75.94%), Query Frame = 0
Query:   11 RKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNLFGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV 143
            RKIGIGLT FG+ F +LG+ +LFD GLLAMGN+L+L+GV ++IG  R++RFFFQ+ KAK +  F  G+  VL G PV GM +E+FGF+NLFGDFFP+VI FLR+ PV G+LL LP +  V D+  GS  KLPV
Sbjct:    6 RKIGIGLTGFGIFFLLLGILMLFDTGLLAMGNLLFLSGVGLLIGWDRTIRFFFQRHKAKGTTCFLGGIFVVLCGWPVIGMCVEIFGFINLFGDFFPIVINFLRQMPVVGQLLNLPGIAQVVDKFTGS--KLPV 136          
The following BLAST results are available for this feature:
BLAST of Gchil3870.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ2_9FLOR8.430e-8292.31Putative Golgi transport protein 1 n=1 Tax=Gracila... [more]
A0A1X6PC43_PORUM5.640e-5366.67Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0EAX9_9EUKA2.060e-4760.87Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A5J4YNX5_PORPP9.550e-4657.14Vesicle transport protein GOT1 n=1 Tax=Porphyridiu... [more]
A0A7S2ZZF7_9RHOD1.120e-4556.93Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3W5F4_9SPIT3.210e-4560.87Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
UPI001F4FD6843.530e-4558.09vesicle transport protein GOT1B n=1 Tax=Schistocer... [more]
A0A1S3DJP2_DIACI1.010e-4459.70vesicle transport protein GOT1B isoform X2 n=1 Tax... [more]
A0A6J1SRK0_FRAOC2.880e-4456.12vesicle transport protein GOT1B n=2 Tax=Thripinae ... [more]
A0A0D2X527_CAPO31.030e-4359.40Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 17..116
e-value: 4.5E-15
score: 56.1
IPR045176Protein transport protein Got1PANTHERPTHR21493CGI-141-RELATED/LIPASE CONTAINING PROTEINcoord: 5..134
NoneNo IPR availablePANTHERPTHR21493:SF9GOLGI TRANSPORT PROTEIN 1-RELATEDcoord: 5..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..112
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000010_piloncontigtig00000010_pilon:1126213..1126721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3870.t1Gchil3870.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000010_pilon 1126213..1126721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3870.t1 ID=Gchil3870.t1|Name=Gchil3870.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=144bp
MSSPFAITDVRKIGIGLTAFGLAFSVLGVALLFDKGLLAMGNVLYLAGVM
MIIGPTRSVRFFFQKRKAKASVFFFCGMAFVLFGLPVFGMGIELFGFVNL
FGDFFPVVIAFLRRAPVTGKLLGLPLVRNVADRLAGSTTKLPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR045176Got1