Gchil3743.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3743.t1
Unique NameGchil3743.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length109
Homology
BLAST of Gchil3743.t1 vs. uniprot
Match: A0A2V3J6C4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6C4_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 2.860e-47
Identity = 77/99 (77.78%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    1 MKVPEQVYSGMPRGISSTAALVLLAINVFMPGVGTIISAFLAAECMSETVFVGVLQLITSPLLGLGFIWAIVWSVRLYRKHSSDTAAPVPG-DEESPLV 98
            MK+PEQVYSGMPRG+SSTAALV+LAINVF PGVGTIISAFL  ECM+ETVFVG+LQL+TSPLLGLGF WAI WS+RLYRKHS+    P    DEE+PLV
Sbjct:    1 MKIPEQVYSGMPRGLSSTAALVILAINVFAPGVGTIISAFLGTECMNETVFVGILQLLTSPLLGLGFFWAIAWSIRLYRKHSTADETPTSATDEETPLV 99          
BLAST of Gchil3743.t1 vs. uniprot
Match: R7Q4E7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4E7_CHOCR)

HSP 1 Score: 63.5 bits (153), Expect = 4.900e-10
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 0
Query:   20 ALVLLAINVFMPGVGTIISAFLAAECMSETVFVGVLQLITSPLLGLGFIWAIVWSVRLYRK 80
            ++++LAINVF PGVGT+I+  +  +    T+ VG+LQL+ S  L +G+IWAI+WSV LY+K
Sbjct:   37 SMIILAINVFFPGVGTMIAGCMGTKNNCSTITVGILQLLLSVFL-IGWIWAIIWSVMLYKK 96          
BLAST of Gchil3743.t1 vs. uniprot
Match: D7FIX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIX6_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 3.070e-9
Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   12 PRGISSTAALVLLAINVFMPGVGTIISAFLAAECMSETVFVGVLQLITSPLLGLGFIWAIVWSVRLY---RKH 81
            P  +    A VLL INVF+PG+GT+I+ FL   C  +++F G+LQL+T+ L+ +G++W+++W   L+   R+H
Sbjct:   11 PPVLRKPLAFVLLVINVFVPGLGTVIAGFLT--CKLKSIFTGILQLVTTSLV-VGWVWSVMWGWELWTLARRH 80          
BLAST of Gchil3743.t1 vs. uniprot
Match: A0A2V3IZL1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZL1_9FLOR)

HSP 1 Score: 53.1 bits (126), Expect = 2.240e-6
Identity = 28/73 (38.36%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    8 YSGMPRGISSTAALVLLAINVFMPGVGTIISAFLAAECMSETVFVGVLQLITSPLLGLGFIWAIVWSVRLYRK 80
            + G+P  IS   A +++ +N+F PGVGTII++ L        + VG+LQL   P+L +G+IWA+ W + L ++
Sbjct:    3 FIGLPNRISRDEATMIIIVNLFFPGVGTIIASCLGTHG-GAAICVGILQLCLFPVL-IGWIWALCWGLELRKR 73          
BLAST of Gchil3743.t1 vs. uniprot
Match: A0A7S0UD76_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UD76_HEMAN)

HSP 1 Score: 51.2 bits (121), Expect = 4.570e-6
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    2 KVPEQVYSGMPRGISSTAALVLLAINVFMPGVGTIISAFLAAECMSETVFVGVLQLITSPLLGLGFIWAIVWSVRLYRKHSSDTAAPV 89
            +V E + +     IS    ++   +NVF+PGVG++++   A E    TV +GVLQLIT   + LG+IW+I W   ++ K SSD  +P+
Sbjct:   22 EVVEDIKTQSVPSISKNMGILCFLLNVFLPGVGSMVAG--AMESKWSTVIIGVLQLITCWFI-LGWIWSIWWGWLIFSK-SSDGFSPL 105          
BLAST of Gchil3743.t1 vs. uniprot
Match: A0A6A5BW58_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BW58_NAEFO)

HSP 1 Score: 50.4 bits (119), Expect = 4.890e-6
Identity = 26/64 (40.62%), Postives = 44/64 (68.75%), Query Frame = 0
Query:   21 LVLLAINVFMPGVGTIISAFLAAEC--MSETVFVGVLQLITSPLLGLGFIWAIVWSVRLYRKHS 82
            +V+L IN F PG GTI++A + +E   M  T+ VG+LQ++TS +L +G++WAI W  ++ +  +
Sbjct:   16 IVILLINFFFPGFGTILAALITSEKEKMQPTLIVGILQIVTSWIL-IGWLWAIWWGYKIMQASA 78          
BLAST of Gchil3743.t1 vs. uniprot
Match: J9I0Z1_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I0Z1_9SPIT)

HSP 1 Score: 50.8 bits (120), Expect = 5.920e-6
Identity = 28/71 (39.44%), Postives = 45/71 (63.38%), Query Frame = 0
Query:   16 SSTAALVLLAINVFMPGVGTIISAFLAAECMSETVFVGVLQLITSPLLGLGFIWAIVWSVRLY----RKHS 82
            SS  AL  L +N+F+PG+GTI++A +        ++ G+LQ + +PL  +G+IW+IV+ +R      RKHS
Sbjct:   12 SSGIALACLILNIFIPGMGTILNAGVGYRVCPGVLY-GILQFLLTPLFLIGWIWSIVYGIRCIQIAERKHS 81          
The following BLAST results are available for this feature:
BLAST of Gchil3743.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J6C4_9FLOR2.860e-4777.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4E7_CHOCR4.900e-1050.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
D7FIX6_ECTSI3.070e-941.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2V3IZL1_9FLOR2.240e-638.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0UD76_HEMAN4.570e-637.50Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A6A5BW58_NAEFO4.890e-640.63Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
J9I0Z1_9SPIT5.920e-639.44Uncharacterized protein n=1 Tax=Oxytricha trifalla... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..72
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:1103260..1103586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3743.t1Gchil3743.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025222_pilon 1103260..1103586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3743.t1 ID=Gchil3743.t1|Name=Gchil3743.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=109bp
MKVPEQVYSGMPRGISSTAALVLLAINVFMPGVGTIISAFLAAECMSETV
FVGVLQLITSPLLGLGFIWAIVWSVRLYRKHSSDTAAPVPGDEESPLVSG
LPDIPGQS*
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