Gchil3687.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil3687.t1
Unique Name	Gchil3687.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	358

Homology

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BLAST of Gchil3687.t1 vs. uniprot
Match: A0A2V3IZS8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS8_9FLOR)

HSP 1 Score: 283 bits (724), Expect = 9.460e-90
Identity = 234/396 (59.09%), Postives = 266/396 (67.17%), Query Frame = 0

Query:    1 MADYQVDPDDVFSEEDSPPLENAISARFLHQSTTSSTHFRPQPTPQTQQSALRPLSLPPLGKSS-FASRPKL-NGTVPHYRHG---TRPYESXXXXXXXXXXXXXXXXXXXXXXXXVGYSRE------PPSR----------------------QARPVSPP-----KRKDESPPSEQKDSLTEAASILPEHTREKVLREXXXXXXXXXXXXXXXXXXXXXXXXAAKKAVLQNAKRSRQGQSFGLASLLAAASNSSSLIKLDPNRNKQHRDFRSTNERAVYAGVTMTKERKEREXXXXXXXEQRRIDEEQAIDDHFRQMRIQERNERRRLSKKWRTMETVAADMRHAYRLAKIERTLF-DPKDKEMASLQDFGLKLQPMGEDPQVTEMWTIEIEDI 357
            MA YQVDPD +FS+EDSPP E            T     RPQPT    QS LRPL+LPPLG+SS F+  P L NG       G   +RPY  XXXXXXXXXXXXXXX           YSR       PP R                      + R ++ P      +K ESP  ++ DSL+EA SILPEHTREKVLREXXXXXXXXXXXXXXXXXXXX    + KKAVLQNAKRSRQGQS GLASLLAAASNS+S+I+LDPNRN+ HR+ R+T+ERA Y GVTMTKERKEREXXX    E++RIDEEQA+D+HFRQMRIQERNERRRL+ KWR  ETVAA MRH YRLAKIER+LF DP DK   SL   GL L+ + ED  VTE+ TIE+E+I
Sbjct:    1 MAAYQVDPDALFSDEDSPPRE------------TPPRIARPQPT----QSTLRPLTLPPLGRSSVFSKAPSLSNGPFSGRGRGKYESRPYXXXXXXXXXXXXXXXXXHRQDGRSYNSAYSRATEQSRPPPLRGLSAYQRPNTSERSDVPQRPMGRGRAMTLPAHVTKNKKAESP--KKPDSLSEAVSILPEHTREKVLREXXXXXXXXXXXXXXXXXXXXPEDPSVKKAVLQNAKRSRQGQSMGLASLLAAASNSNSIIRLDPNRNRTHREHRATSERAFYEGVTMTKERKEREXXXRLEAERKRIDEEQAVDEHFRQMRIQERNERRRLADKWRRQETVAAGMRHVYRLAKIERSLFCDPNDKNKDSLSYLGLALRSIEEDATVTELMTIEVEEI 378

The following BLAST results are available for this feature:

BLAST of Gchil3687.t1 vs. uniprot

BLAST of Gchil3687.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IZS8_9FLOR	9.460e-90	59.09	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 246..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00025222_pilon	contig	tig00025222_pilon:597457..598530 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil3687.t1	Gchil3687.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00025222_pilon 597457..598530 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil3687.t1 ID=Gchil3687.t1|Name=Gchil3687.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=358bp
MADYQVDPDDVFSEEDSPPLENAISARFLHQSTTSSTHFRPQPTPQTQQS
ALRPLSLPPLGKSSFASRPKLNGTVPHYRHGTRPYESRPHRPRIHEPRQR
DSRSSESGYRSVGYSREPPSRQARPVSPPKRKDESPPSEQKDSLTEAASI
LPEHTREKVLREEEKRRAAAASERKRPSRKRRSEDPAAKKAVLQNAKRSR
QGQSFGLASLLAAASNSSSLIKLDPNRNKQHRDFRSTNERAVYAGVTMTK
ERKEREERERREAEQRRIDEEQAIDDHFRQMRIQERNERRRLSKKWRTME
TVAADMRHAYRLAKIERTLFDPKDKEMASLQDFGLKLQPMGEDPQVTEMW
TIEIEDI*