Gchil345.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil345.t1
Unique NameGchil345.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length334
Homology
BLAST of Gchil345.t1 vs. uniprot
Match: A0A2V3IZU5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZU5_9FLOR)

HSP 1 Score: 454 bits (1168), Expect = 4.400e-158
Identity = 216/326 (66.26%), Postives = 256/326 (78.53%), Query Frame = 0
Query:    8 PLKLD---LHLCRRRLTLFLPFIAILTLLSVISDNRSVPRGFSATCSSRSEPLHGGDCEALREPRRPTWACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLKGVEYLTDKYFNDFSSVDWATMGVDPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCELTRKSLWAGSVRDNFGKNHTAQSWEQHLRLGEHLKSTLRTYYEFPPVASMELTHQRRYDEKHTTPPIVKDAAFFEKHLAPFGEREFAAYTHFCFVELM 330
            PLKLD    HL      L +P + +LTL    S N       S +CSSR+ P HGGDCEA+ EPRRP+WACT +MK A+P+FISLYNSRP++NN GGV+FDHAFALWYTLRMEQPK VIESGAFKGLTTW+IR  LP ARIIS+DPA  +R L+GVEY+T   F DF+S+DWA  GV+ ++T+VFLDDHQS+FRRIF +NKHSF RFI EDNY YL+GDN+SLKWVCE +RKSLW G+VRDNFGKN T+QSWEQHL LGE L S+ RTYYEFPP+AS  +T Q RYDE H+TP IV D AFF+KHL+ F +R+FA YTH CF EL+
Sbjct:    8 PLKLDNPPRHLILITTLLLVPVLTLLTL----SFNAHRLNRLSFSCSSRTAPQHGGDCEAIGEPRRPSWACTQNMKDAIPEFISLYNSRPIQNNFGGVLFDHAFALWYTLRMEQPKIVIESGAFKGLTTWLIREALPAARIISIDPANRARTLRGVEYMTGNNFTDFASIDWAAKGVNAQDTIVFLDDHQSAFRRIFAENKHSFTRFIVEDNYDYLKGDNMSLKWVCERSRKSLWQGTVRDNFGKNKTSQSWEQHLELGERLNSSFRTYYEFPPLASSSMTGQTRYDELHSTPAIVTDRAFFDKHLSRFDKRQFAGYTHLCFAELL 329          
BLAST of Gchil345.t1 vs. uniprot
Match: A0A812N168_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812N168_9DINO)

HSP 1 Score: 289 bits (739), Expect = 2.280e-89
Identity = 150/288 (52.08%), Postives = 186/288 (64.58%), Query Frame = 0
Query:   49 TCSSRSEPLHGGDCEALR-EPRRPTWACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDP-AEPSRRLKGVEYLTDKYFNDFSSVDWATMGVDPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCELTRKSLWAGSVRDNFGKNHTAQSWEQHLRLGEHLKSTLRTYYEFPPVASMELTHQRRYDEKHTTPPIVKDAAFFEKHLAPFGER-----EFAAYTHFCFVEL 329
            TCS       GGDC+AL  E RRP WAC   M+ ALP F+ LY+ RP++NN GG+  DH+FA+++TLR  +PK VIESGAF+G  TWII+  LP ARIISLDP  EP RRL GVEY     F D + +DW + GVDP ET++F+DDHQS +RRI       F RFI +DNY Y +GDN SLK VCE+ R+SLW G+V DNF K   + +WE HL+    L    RTYYEFPP+AS EL+    +D  HTT PIV D A F K L     R     +   YTH+ +VE+
Sbjct:   10 TCSEPHAAADGGDCQALGGELRRPEWACYSEMRAALPCFLELYDKRPIQNNLGGMQVDHSFAMFFTLRKLRPKVVIESGAFRGHGTWIIKQALPDARIISLDPEVEPYRRLDGVEYKLKGSFRDVAKIDWKSEGVDPAETIMFIDDHQSGYRRILELMSQGFTRFIFDDNYPYNKGDNYSLKKVCEIERQSLWRGTVVDNFSKAKYSVTWEYHLKHANFLPKLFRTYYEFPPLASRELSGAT-WDPDHTTAPIVSDPALF-KSLGLAATRAKDRTQMHTYTHWLYVEI 295          
BLAST of Gchil345.t1 vs. uniprot
Match: A0A7R9Z4W8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4W8_9STRA)

HSP 1 Score: 236 bits (601), Expect = 8.310e-74
Identity = 111/201 (55.22%), Postives = 138/201 (68.66%), Query Frame = 0
Query:  133 TWIIRTTLPTARIISLDPAEPSRRLKGVEYLTDKYFNDFSSVDWATMGVDPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCELTRKSLWAGSVRDNFGKNHTAQSWEQHLRLGEHLKSTLRTYYEFPPVASMELTHQRRYDEKHTTPPIVKDAAFFEKHLAPFGE----REFAAYTHFCFVEL 329
            TWI+RT LP ARIIS+DP  P  RL GVEYL  K F DFS VDW   G+DP  T+VFLDDHQS+++R FL N+H F RF+ +DNYGYLEGD +S K VCE+ R+SLW G V D+FG+     +W +H+     LK  L TYYEFPP AS ELT Q+RYD ++T+ PIV D  FFE+HLA +       E  +Y HF +VE+
Sbjct:    3 TWIVRTALPEARIISMDPNPPKSRLDGVEYLVGKDFVDFSKVDWEARGIDPDRTVVFLDDHQSAYKRAFLQNEHRFYRFLIDDNYGYLEGDAMSFKSVCEVERESLWTGKVLDDFGRIEAPMTWTKHMEQVAFLKKALVTYYEFPPTASSELTRQKRYDPRYTSAPIVTDPGFFEEHLAKYNRWHNWGELTSYFHFSYVEI 203          
BLAST of Gchil345.t1 vs. uniprot
Match: A0A5A7QWR8_STRAF (Uncharacterized protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QWR8_STRAF)

HSP 1 Score: 160 bits (405), Expect = 3.850e-42
Identity = 97/294 (32.99%), Postives = 142/294 (48.30%), Query Frame = 0
Query:   73 WACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLK--------GVEYLTDKYFNDFSSVDWATM----GV-DPKETLVFLDDHQSSF-RRIFLDNKHSFRRFIAEDNYGY-LEGDNVSLKWVCELTRKSLWA-------------------GSVRDNFGKNHTAQSWEQHLRLGEHLKSTLRTYYEFPPVASMELTHQRRYDEKHTTPPIVKDAA---FFEKHLAPFGEREFAAYTHFCFVEL 329
            W   D ++  L +F+ +Y +RP++NN  G+ FDH+F LW+  +  QP  +IESGAFKG +TW++R  +P   I+SL P  P + LK           Y   K F DF S++W  +    G+ D    LVF DDHQ+   RR+    K  F+  + EDNY    + D   ++      RK  W                    G +RD+F  ++   S+ +H +    ++S L  Y+E PPVA   LTHQ RYD   T  PIV+D     F    L  F    F  YT   ++++
Sbjct:  128 WTSKDLLR-GLEEFVPIYETRPIQNNMYGMGFDHSFGLWFITKWLQPDLMIESGAFKGHSTWVLRQAMPDKHIVSLSPRHPEKYLKKGPAYVDSNCTYFAGKDFVDFGSMEWGRLMRKHGIKDRSRVLVFFDDHQNELKRRLKQALKAGFKHLVFEDNYDTGTDSDEARIRH----RRKKFWEKAVDINELCGPGEEWWGVRGYMRDDFNHSNKPISYNEHFQNSRFVESVLHVYWELPPVAGPSLTHQTRYDPARTPSPIVEDGKYGLFRRLGLLQFDPSVFNGYTQMVYLQV 416          
BLAST of Gchil345.t1 vs. uniprot
Match: A0A446LDQ6_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446LDQ6_TRITD)

HSP 1 Score: 149 bits (375), Expect = 5.460e-39
Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 0
Query:   69 RRPTWACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLK--------GVEYLTDKYFNDFSSVDWATM----GV-DPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCE 232
            R   W   D +   L +F+ +Y +RP++NN  G+ FDH+F LW+  R  +P  +IESGAFKG +TW++R  +P  RIISL P  P + LK           YL  K F DF SVDW  +    G+ DP + LVF DDHQS  +R+   +K  FR  I EDNY    GD+ SL+ +C+
Sbjct:  112 RTVEWTSKDLLN-GLEEFVPIYQTRPIKNNMHGMRFDHSFGLWFMARWLKPNLMIESGAFKGHSTWVLRQAMPNTRIISLTPRHPEKYLKKGPAYVDGNCTYLAGKDFIDFGSVDWEKLLRKHGISDPSKVLVFFDDHQSELKRLKQAHKAGFRHLIFEDNYDTGTGDHYSLRQICD 287          
BLAST of Gchil345.t1 vs. uniprot
Match: J3L080_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3L080_ORYBR)

HSP 1 Score: 149 bits (376), Expect = 8.760e-38
Identity = 73/173 (42.20%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   73 WACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLK--------GVEYLTDKYFNDFSSVDWATM----GV-DPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCE 232
            W   D ++  L +F+ +Y +RP++NN  G+ FDH+F LW+ +R  +P  +IESGAFKG +TW++R  +P  RI+SL P  P + LK           YL  K F DF SVDW  +    G+ DP   LVF DDHQS  +R+   +K  FR  I EDNY    GD+ SL+ +C+
Sbjct:  120 WTSKDLLR-GLEEFVPIYETRPIKNNMYGMGFDHSFGLWFMVRWLKPDLMIESGAFKGHSTWVLRQAMPNTRIVSLSPRHPEKYLKKGPAYVDGNCTYLAGKDFIDFGSVDWGKLLRKHGIPDPSRVLVFFDDHQSELKRLKQASKFGFRHLIFEDNYDTGSGDHYSLRQICD 291          
BLAST of Gchil345.t1 vs. uniprot
Match: A0A6G1DVK8_9ORYZ (Uncharacterized protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1DVK8_9ORYZ)

HSP 1 Score: 147 bits (372), Expect = 1.440e-37
Identity = 74/173 (42.77%), Postives = 100/173 (57.80%), Query Frame = 0
Query:   73 WACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLK--------GVEYLTDKYFNDFSSVDWATM----GV-DPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCE 232
            W   D +   L +F+ +Y +RP++NN  G+ FDH+F LW+  R  +P  +IESGAFKG +TW++R  +P  RIISL P  P + LK           YL  K F DF SVDW  +    G+ DP   LVF DDHQS  +R+   +K  FR  I EDNY    GD+ SL+ +C+
Sbjct:  199 WTSKDLL-HGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFMARWLKPDLMIESGAFKGHSTWVLRQAMPNTRIISLSPRHPEKYLKKGPAYVDGNCTYLAGKDFIDFGSVDWGKLLRKHGISDPSRVLVFFDDHQSELKRLKQSSKVGFRHLIFEDNYDTGTGDHYSLRQICD 370          
BLAST of Gchil345.t1 vs. uniprot
Match: UPI001ADA72E9 (uncharacterized protein LOC102718887 n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA72E9)

HSP 1 Score: 149 bits (376), Expect = 2.160e-37
Identity = 73/173 (42.20%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   73 WACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLK--------GVEYLTDKYFNDFSSVDWATM----GV-DPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCE 232
            W   D ++  L +F+ +Y +RP++NN  G+ FDH+F LW+ +R  +P  +IESGAFKG +TW++R  +P  RI+SL P  P + LK           YL  K F DF SVDW  +    G+ DP   LVF DDHQS  +R+   +K  FR  I EDNY    GD+ SL+ +C+
Sbjct:  177 WTSKDLLR-GLEEFVPIYETRPIKNNMYGMGFDHSFGLWFMVRWLKPDLMIESGAFKGHSTWVLRQAMPNTRIVSLSPRHPEKYLKKGPAYVDGNCTYLAGKDFIDFGSVDWGKLLRKHGIPDPSRVLVFFDDHQSELKRLKQASKFGFRHLIFEDNYDTGSGDHYSLRQICD 348          
BLAST of Gchil345.t1 vs. uniprot
Match: A0A0E0JJ79_ORYPU (Uncharacterized protein n=4 Tax=Oryzinae TaxID=1648021 RepID=A0A0E0JJ79_ORYPU)

HSP 1 Score: 147 bits (372), Expect = 3.700e-37
Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = 0
Query:   73 WACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLK--------GVEYLTDKYFNDFSSVDWATM----GV-DPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCE 232
            W   D ++  L +F+ +Y +RP++NN  G+ FDH+F LW+  R  +P  +IESGAFKG +TW++R  +P  RIISL P  P + LK           YL  K F DF SVDW  +    G+ DP   LVF DDHQS  +R+   +K  FR  I EDNY    GD+ SL+ +C+
Sbjct:  127 WTSKDLLR-GLEEFVPIYETRPIKNNMYGMGFDHSFGLWFMARWLKPDLMIESGAFKGHSTWVLRQAMPNTRIISLSPRHPEKYLKKGPAYVDGNCTYLAGKDFIDFGSVDWGKLLRNHGISDPSRVLVFFDDHQSELKRLKQASKVGFRHLIFEDNYDTGTGDHYSLRQICD 298          
BLAST of Gchil345.t1 vs. uniprot
Match: A0A1D5UT84_WHEAT (Genome assembly, chromosome: II n=13 Tax=Triticeae TaxID=147389 RepID=A0A1D5UT84_WHEAT)

HSP 1 Score: 147 bits (371), Expect = 4.420e-37
Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = 0
Query:   73 WACTDSMKQALPKFISLYNSRPVRNNTGGVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDPAEPSRRLK--------GVEYLTDKYFNDFSSVDWATM----GV-DPKETLVFLDDHQSSFRRIFLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCE 232
            W   D +   L +F+ +Y +RP++NN  G+ FDH+F LW+  R  +P  +IESGAFKG +TW++R  +P  RIISL P  P + LK           YL  K F DF SVDW  +    G+ DP + LVF DDHQS  +R+   +K  FR  I EDNY    GD+ SL+ +C+
Sbjct:  118 WTSKDLLN-GLEEFVPIYQTRPMKNNMHGMRFDHSFGLWFMARWLKPDLMIESGAFKGHSTWVLRQAMPNTRIISLTPRHPEKYLKKGPAYVDGNCTYLAGKDFIDFGSVDWEKLLMKHGISDPSKVLVFFDDHQSELKRLKQAHKAGFRHLIFEDNYDTGTGDHYSLRQICD 289          
The following BLAST results are available for this feature:
BLAST of Gchil345.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZU5_9FLOR4.400e-15866.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A812N168_9DINO2.280e-8952.08Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A7R9Z4W8_9STRA8.310e-7455.22Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A5A7QWR8_STRAF3.850e-4232.99Uncharacterized protein n=1 Tax=Striga asiatica Ta... [more]
A0A446LDQ6_TRITD5.460e-3942.37Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
J3L080_ORYBR8.760e-3842.20Uncharacterized protein n=1 Tax=Oryza brachyantha ... [more]
A0A6G1DVK8_9ORYZ1.440e-3742.77Uncharacterized protein n=1 Tax=Oryza meyeriana va... [more]
UPI001ADA72E92.160e-3742.20uncharacterized protein LOC102718887 n=1 Tax=Oryza... [more]
A0A0E0JJ79_ORYPU3.700e-3742.77Uncharacterized protein n=4 Tax=Oryzinae TaxID=164... [more]
A0A1D5UT84_WHEAT4.420e-3742.77Genome assembly, chromosome: II n=13 Tax=Triticeae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36362DNA-DIRECTED RNA POLYMERASE SUBUNIT BETAcoord: 72..232
coord: 241..322
NoneNo IPR availablePANTHERPTHR36362:SF2BNAC05G37190D PROTEINcoord: 72..232
NoneNo IPR availablePANTHERPTHR36362:SF2BNAC05G37190D PROTEINcoord: 241..322
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..333
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availableTMHMMTMhelixcoord: 20..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:412365..413366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil345.t1Gchil345.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 412365..413366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil345.t1 ID=Gchil345.t1|Name=Gchil345.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=334bp
MSSPSRAPLKLDLHLCRRRLTLFLPFIAILTLLSVISDNRSVPRGFSATC
SSRSEPLHGGDCEALREPRRPTWACTDSMKQALPKFISLYNSRPVRNNTG
GVMFDHAFALWYTLRMEQPKTVIESGAFKGLTTWIIRTTLPTARIISLDP
AEPSRRLKGVEYLTDKYFNDFSSVDWATMGVDPKETLVFLDDHQSSFRRI
FLDNKHSFRRFIAEDNYGYLEGDNVSLKWVCELTRKSLWAGSVRDNFGKN
HTAQSWEQHLRLGEHLKSTLRTYYEFPPVASMELTHQRRYDEKHTTPPIV
KDAAFFEKHLAPFGEREFAAYTHFCFVELMTHS*
back to top