Gchil3400.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3400.t1
Unique NameGchil3400.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length197
Homology
BLAST of Gchil3400.t1 vs. uniprot
Match: A0A2V3J426_9FLOR (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J426_9FLOR)

HSP 1 Score: 227 bits (579), Expect = 7.990e-73
Identity = 119/200 (59.50%), Postives = 150/200 (75.00%), Query Frame = 0
Query:    1 MEGFLAKRGKRIGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISCNTAKNRIVLHLYGNRLDLFADSSADCDLWFHALSAV-----VRDKAAAVAAAKENRQPNANANRPPLVTLDS-DGIMAQNNAAARRAASRTSDLGVNFKVVKPNSSLSAATVRSTASSDEPHESTQPLAVNGHVYEETPASMIFKQFNFP 194
            MEGFLAKRGKR+GSRVKRYMRL  AFL+NHH P+EPPTWRV+I DA ISCNT KNRI + LYGN+L+L+AD+S DCDLW+ AL+A      + + +++ A  KEN QP+   + P L+ + S D    +NN +++RA    SDLG NFKVVKP  S +    +S+A+SD+P++  QPLAVNG VYEETPASMIFKQFNFP
Sbjct:    1 MEGFLAKRGKRMGSRVKRYMRLDAAFLSNHHTPNEPPTWRVNIKDAHISCNTKKNRITIDLYGNKLELYADTSHDCDLWYDALTASKAKANLSNPSSSHANGKENNQPSNQTHDPRLINMQSCDMPDPENNRSSKRA----SDLGKNFKVVKPQPSNNNVLAQSSAASDDPYDGQQPLAVNGQVYEETPASMIFKQFNFP 196          
BLAST of Gchil3400.t1 vs. uniprot
Match: R7QS02_CHOCR (PH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS02_CHOCR)

HSP 1 Score: 153 bits (386), Expect = 1.840e-43
Identity = 89/199 (44.72%), Postives = 123/199 (61.81%), Query Frame = 0
Query:    1 MEGFLAKRGKRIGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISCNTAKNRIVLHLYGNRLDLFADSSADCDLWFHALSAVVRDKAAAVAAAKENRQPNANANRPPLVTLDSDGIMAQNNA-----AARRAASRTSDLGVNFKVVKPNSSLSAATVRSTASSDEPHESTQPLAVNGHVYEETPASMIFKQFNFP 194
            MEG+L K+GKR+GSRVKRYMRL GA L+NHHA   PP+WRV++ DA I  +  ++++ + LY N+L+L+A+S+ +   WF AL    +  A+  AA   +  P A+ + P     D D   +++ A        R A+  + L  NFKVVKP S   ++T   ++ SDE +E   PL V G VYEETPASMIFKQF FP
Sbjct:   14 MEGYLGKKGKRMGSRVKRYMRLDGAILSNHHAAGAPPSWRVNVKDAVIGHHAKRHKVTIELYNNKLELYAESARESSQWFDALRNAKKKAASRDAAPSNDSMPAASVDLP----ADIDASRSRSQADPVEDRQDRPANARAHLSNNFKVVKPASRNVSST--DSSGSDEAYEGG-PLVVQGQVYEETPASMIFKQFTFP 205          
BLAST of Gchil3400.t1 vs. uniprot
Match: A0A7S0T7G0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7G0_9RHOD)

HSP 1 Score: 67.8 bits (164), Expect = 7.050e-10
Identity = 27/83 (32.53%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    1 MEGFLAKRGKRIGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISCNTAKNRIVLHLYGNRLDLFADSSADCDLWFHAL 83
            M G++ K GK + S+V+R+++L+G+ L+NHH+ + P +W V + +  +   +  N +V+HL G +   FA +  +   W  AL
Sbjct:   12 MSGWVYKEGKFLRSKVRRFLKLRGSMLSNHHSDNSPASWEVSVLECPVCAGSRANELVIHLPGRKTSFFAANEREYSRWMEAL 94          
BLAST of Gchil3400.t1 vs. uniprot
Match: A0A5J4YUJ5_PORPP (Putative myosin light chain kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUJ5_PORPP)

HSP 1 Score: 67.8 bits (164), Expect = 7.160e-10
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    2 EGFLAKRGKRIGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISCNTAKNRIVLHLYGNRLDLFADSSADCDLWFHAL 83
            +G+L K G+ + S+ +R++RL+G  L+NHHA + P TW V + D  +      N +V+ L   R+ LFA++  + + W  AL
Sbjct:   58 QGWLYKEGRVLRSKHRRFLRLKGTILSNHHAENAPATWEVSVLDCPVRAGAKHNELVIQLPSRRVSLFAENDREFNRWVQAL 139          
BLAST of Gchil3400.t1 vs. uniprot
Match: A0A7S1ET06_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET06_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 1.290e-8
Identity = 24/83 (28.92%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    1 MEGFLAKRGKRIGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISCNTAKNRIVLHLYGNRLDLFADSSADCDLWFHAL 83
            + G++ K G+ + S+ +RY++L+G+ L+NHH+ + P +W V + +  +S  + +N +V+ L   R+  F ++  +   W  AL
Sbjct:   16 ISGWVTKEGRLLRSKHRRYLKLRGSILSNHHSENSPASWEVSVVERPVSSGSKRNELVIPLPTRRVSFFVENDREFTKWMEAL 98          
BLAST of Gchil3400.t1 vs. uniprot
Match: A0A1X6NZW0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZW0_PORUM)

HSP 1 Score: 61.6 bits (148), Expect = 1.110e-7
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 0
Query:    1 MEGFLAKRGKR-IGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISCNTAKNRIVLHLYGNRLDLFADSSADCDLWFHAL 83
            M+G+L K GK  + SR +RY RL+G  L+NHH+P  P +W   +    ++    ++ +V+ L   ++  FA+++ D   W  AL
Sbjct:   12 MDGWLFKEGKSFLRSRTRRYFRLKGTVLSNHHSPGSPASWEASVISCPVTAGAREHELVVALPTRQMSFFAETATDFAAWVDAL 95          
BLAST of Gchil3400.t1 vs. uniprot
Match: A0A1X6NVD8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVD8_PORUM)

HSP 1 Score: 56.6 bits (135), Expect = 4.970e-6
Identity = 32/87 (36.78%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    1 MEGFLAKRGKRIGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISCNTAKNRIVLHLYGNR-LDLFADSSADCDLWFHALSAV 86
            M G+L K G     R +RY+RL+G  L+NHH+   P TW V ++D  ++       +VL L   R +  FA ++A+   W  AL AV
Sbjct:   12 MGGWLIKEGS-FRRRYRRYVRLKGQILSNHHSEVSPATWEVSVTDVDVAAGGRTGELVLTLPDRRRVSFFAATTAEAAEWTAALKAV 97          
The following BLAST results are available for this feature:
BLAST of Gchil3400.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J426_9FLOR7.990e-7359.50PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QS02_CHOCR1.840e-4344.72PH domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A7S0T7G0_9RHOD7.050e-1032.53Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A5J4YUJ5_PORPP7.160e-1035.37Putative myosin light chain kinase n=1 Tax=Porphyr... [more]
A0A7S1ET06_9RHOD1.290e-828.92Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A1X6NZW0_PORUM1.110e-733.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NVD8_PORUM4.970e-636.78Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 1..90
e-value: 1.2E-5
score: 34.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..88
score: 7.2179
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..99
e-value: 1.1E-7
score: 33.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..176
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 1..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:907047..907637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3400.t1Gchil3400.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 907047..907637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3400.t1 ID=Gchil3400.t1|Name=Gchil3400.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=197bp
MEGFLAKRGKRIGSRVKRYMRLQGAFLTNHHAPHEPPTWRVDISDASISC
NTAKNRIVLHLYGNRLDLFADSSADCDLWFHALSAVVRDKAAAVAAAKEN
RQPNANANRPPLVTLDSDGIMAQNNAAARRAASRTSDLGVNFKVVKPNSS
LSAATVRSTASSDEPHESTQPLAVNGHVYEETPASMIFKQFNFPPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf