Gchil3294.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3294.t1
Unique NameGchil3294.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length311
Homology
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BLAST of Gchil3294.t1 vs. uniprot
Match: A0A7S1TB56_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB56_9RHOD)

HSP 1 Score: 61.2 bits (147), Expect = 8.320e-8
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0 
Query:  197 RKPTSKQNRVIPCPYRDCDKTFSRNSNLKVHMRIHTGTYPFGCHL--CERKFMWSSSLHWHLKWHEKQ 262
            R P++K+  +  C    C K+FS   NL+VH RIH GTYP  CH+  C RKF W SSL  HL+ H ++
Sbjct:   12 RSPSNKKRYL--CLNEKCGKSFSTAYNLRVHCRIHLGTYPRECHMEGCTRKFRWPSSLKSHLRSHAQK 77
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BLAST of Gchil3294.t1 vs. uniprot
Match: A0A2V3J1Z7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z7_9FLOR)

HSP 1 Score: 59.3 bits (142), Expect = 1.390e-7
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:  206 VIPCPYRDCDKTFSRNSNLKVHMRIHTGTYPFGCHL--CERKFMWSSSLHWHLK 257
            V  CP+ +C +T + +SNLK HMR+HTG  P+ C    C R F W SSL +H K
Sbjct:    4 VYACPFDNCARTSTEHSNLKAHMRMHTGERPYTCSAPGCRRNFRWKSSLTYHEK 57
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BLAST of Gchil3294.t1 vs. uniprot
Match: A0A3B3E1P2_ORYME (C2H2-type domain-containing protein n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3E1P2_ORYME)

HSP 1 Score: 53.1 bits (126), Expect = 7.210e-6
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:  218 FSRNSNLKVHMRIHTGTYPFGCHLCERKFMWSSSLHWHLKWH 259
            ++R SNLK HMRIHTG  PF C +CE++F+ S+S   H+K H
Sbjct:   12 YTRRSNLKTHMRIHTGERPFSCKVCEKRFVQSTS---HMKTH 50
[Close]
BLAST of Gchil3294.t1 vs. uniprot
Match: F7BG86_HORSE (Zinc finger protein 296 n=6 Tax=Perissodactyla TaxID=9787 RepID=F7BG86_HORSE)

HSP 1 Score: 58.2 bits (139), Expect = 7.520e-6
Identity = 33/78 (42.31%), Postives = 37/78 (47.44%), Query Frame = 0 
Query:  209 CPYRDCDKTFSRNSNLKVHMRIHTGTYPFGCHLCERKFMWSSSLHWHLKWHEKQEPQDTSRGRTCNCPCPVHGSTSPV 286
            CP   C KT S  SNLKVHMR HTG  P+ C  C      SS L+ H K H + +PQ          PC   GS  P 
Sbjct:  231 CPV--CTKTLSSFSNLKVHMRSHTGERPYACDQCXXXXAQSSKLNRHKKTHRQLQPQS---------PCTDEGSQEPA 297
The following BLAST results are available for this feature:
BLAST of Gchil3294.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S1TB56_9RHOD8.320e-847.06Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3J1Z7_9FLOR1.390e-748.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A3B3E1P2_ORYME7.210e-654.76C2H2-type domain-containing protein n=1 Tax=Oryzia... [more]
F7BG86_HORSE7.520e-642.31Zinc finger protein 296 n=6 Tax=Perissodactyla Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 207..231
e-value: 1.0E-4
score: 31.7
coord: 237..259
e-value: 24.0
score: 10.0
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 208..231
e-value: 1.7E-7
score: 31.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 239..259
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 209..231
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 237..264
score: 11.219034
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 207..236
score: 14.481979
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 230..291
e-value: 4.2E-8
score: 35.3
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 208..229
e-value: 8.7E-12
score: 46.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..65
NoneNo IPR availablePANTHERPTHR23233SAL-LIKE PROTEINcoord: 47..299
NoneNo IPR availablePANTHERPTHR23233:SF84FI23031P1-RELATEDcoord: 47..299
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 208..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:59154..60180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3294.t1Gchil3294.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 59154..60180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3294.t1 ID=Gchil3294.t1|Name=Gchil3294.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=311bp
MQRSAPSCRDSIANEPTTLSGSISSAVTHRRAPCMLGTQAMTLPAPSALH
HHPSTSLHPRPSPPPLSIPPCTLRISQAVNEHTPPHTMTSSHHRPSYAHQ
VMAPQPSYGSLPHTYTSEPAQYNDRRVVQTSSRRVAIDSLLDARSHVESG
IGCASVLPPIQSRIAPMRAHPNMYNTHNHGNQVYQRQMRHGKENRVRKPT
SKQNRVIPCPYRDCDKTFSRNSNLKVHMRIHTGTYPFGCHLCERKFMWSS
SLHWHLKWHEKQEPQDTSRGRTCNCPCPVHGSTSPVSRTSAGDAREEERT
IASPTRNSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf