Gchil3238.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3238.t1
Unique NameGchil3238.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length186
Homology
BLAST of Gchil3238.t1 vs. uniprot
Match: A0A2V3IVM2_9FLOR (Divalent-cation tolerance protein CutA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVM2_9FLOR)

HSP 1 Score: 119 bits (299), Expect = 3.450e-31
Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:   83 VMAVSTVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQST 182
            VMA STVPD+ VA ++S ALV ERL ACVN V G+ STY WQ  V  D ELLL++KTRA L+  L+ RL+QLHPY VPELIVH++ DG+  YL W+  ST
Sbjct:   48 VMAFSTVPDQAVATAISNALVTERLAACVNTVPGLKSTYCWQGNVNVDDELLLIIKTRAQLIPQLKKRLVQLHPYDVPELIVHSIVDGHAPYLKWIAHST 147          
BLAST of Gchil3238.t1 vs. uniprot
Match: A0A841H839_9BACT (Periplasmic divalent cation tolerance protein n=2 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841H839_9BACT)

HSP 1 Score: 110 bits (275), Expect = 4.750e-28
Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 0
Query:   82 VVMAVSTVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQSTA 183
            VV+A+ST PD   AA + +ALV+ERL+AC+NVV G++S YRW+ +V  DSE+L+LMKTR   V ALRAR+ +LHPY+VPEL+V  V +G   Y  WVR  TA
Sbjct:   10 VVLALSTAPDAGTAARIGQALVDERLIACMNVVPGLTSIYRWEGEVRHDSEVLMLMKTRPGRVDALRARISELHPYRVPELLVAPVVEGLAPYCRWVRDETA 111          
BLAST of Gchil3238.t1 vs. uniprot
Match: I4W3C3_9GAMM (CutA1 divalent ion tolerance protein n=3 Tax=Rhodanobacter TaxID=75309 RepID=I4W3C3_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 1.200e-27
Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 0
Query:   80 AAVVMAVSTVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQSTA 183
            A V++   + PD+  A  ++  LV ERL ACVN + GV STYRWQ  V TDSE+LLL+KT A    AL+ARL+QLHPY++PEL+   VT G+DAYLDWVR + A
Sbjct:    7 ATVLLCHCSCPDQACARQLAETLVGERLAACVNQLPGVQSTYRWQGAVTTDSEVLLLIKTTAGRFEALQARLLQLHPYELPELVAVPVTHGHDAYLDWVRTNVA 110          
BLAST of Gchil3238.t1 vs. uniprot
Match: UPI0019043197 (divalent-cation tolerance protein CutA n=2 Tax=Chromatiaceae TaxID=1046 RepID=UPI0019043197)

HSP 1 Score: 109 bits (272), Expect = 1.310e-27
Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 0
Query:   88 TVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQSTA 183
            T PD   A S+++ LV ERL ACVN++ GV S YRWQDK+ TD+E+LL++KT    V AL AR+  LHPY VPE+I H +T GN  YLDWVRQ TA
Sbjct:   16 TCPDAQTAQSLAQTLVAERLAACVNIMPGVVSLYRWQDKIETDTEVLLMIKTTERQVAALAARIETLHPYDVPEVISHPITTGNKNYLDWVRQCTA 111          
BLAST of Gchil3238.t1 vs. uniprot
Match: A0A4R3YSZ7_9GAMM (Periplasmic divalent cation tolerance protein n=1 Tax=Luteibacter rhizovicinus TaxID=242606 RepID=A0A4R3YSZ7_9GAMM)

HSP 1 Score: 107 bits (266), Expect = 9.900e-27
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   76 NQRTAAVVMAVSTVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQSTAR 184
            N  T  V++A++   +   A  ++ ALVEERL ACVN++ G+ STYRW D+V T++E++LL+KT A    A++ARLI+LHPY+VPE++   V  G+ AYLDWVR ST R
Sbjct:    4 NDDTERVLLAMTGCGEAAAAQVIATALVEERLAACVNIIPGIRSTYRWDDRVQTENEVVLLIKTTAGRYDAMQARLIELHPYEVPEIVAIPVERGHAAYLDWVRASTGR 112          
BLAST of Gchil3238.t1 vs. uniprot
Match: A0A328SX70_9GAMM (Divalent-cation tolerance protein CutA n=2 Tax=Oleiagrimonas TaxID=1649642 RepID=A0A328SX70_9GAMM)

HSP 1 Score: 106 bits (265), Expect = 1.480e-26
Identity = 56/96 (58.33%), Postives = 73/96 (76.04%), Query Frame = 0
Query:   88 TVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQSTA 183
            T PDE  AA ++RALVE RL ACV+ + G++STYRW+  V  D+E+LLL+KTRA+ V AL+ARL++LHPY VPELI   + DG  AYLDW+ +S A
Sbjct:   10 TCPDEASAARIARALVEARLAACVSRLPGLTSTYRWEGAVQEDTEVLLLIKTRAAAVAALQARLLELHPYDVPELIALNIADGLPAYLDWLGESVA 105          
BLAST of Gchil3238.t1 vs. uniprot
Match: A0A3M2HXA2_9GAMM (Divalent-cation tolerance protein CutA n=1 Tax=Lysobacter pythonis TaxID=2483112 RepID=A0A3M2HXA2_9GAMM)

HSP 1 Score: 106 bits (264), Expect = 1.720e-26
Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   82 VVMAVSTVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQST 182
            V++ ++T PD   A  ++ ALVEERL ACVN+V G+ STYRWQ K+  D ELLL++KT A  + ALR RL++LHP+++PEL+    +DG  AYLDWVR  T
Sbjct:    3 VLICLNTCPDRASAERIATALVEERLAACVNLVPGLLSTYRWQGKIARDDELLLIVKTTAERLDALRTRLVELHPHELPELLAVEASDGLAAYLDWVRAET 103          
BLAST of Gchil3238.t1 vs. uniprot
Match: UPI00178842E3 (divalent-cation tolerance protein CutA n=1 Tax=Dyella sp. 7MK23 TaxID=2775866 RepID=UPI00178842E3)

HSP 1 Score: 104 bits (260), Expect = 7.280e-26
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:   82 VVMAVSTVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQS 181
            V++   T PD   A  V+  LV+ERL ACVN + G+ STYRWQD+V TDSE LLL+KT A    AL+ RL+ LHPY++PELI   V  G++AYLDWVR +
Sbjct:    7 VLLCYCTCPDAASAQRVAETLVDERLAACVNRLDGIQSTYRWQDQVTTDSETLLLIKTSAERFDALKQRLLDLHPYELPELIAVPVERGHEAYLDWVRNA 106          
BLAST of Gchil3238.t1 vs. uniprot
Match: A0A0D6XCS2_THEFI (Cation tolerance protein CutA n=1 Tax=Thermus filiformis TaxID=276 RepID=A0A0D6XCS2_THEFI)

HSP 1 Score: 104 bits (259), Expect = 8.670e-26
Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 0
Query:   88 TVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQST 182
            TVP E  A  ++RALVEERL ACVN++ G++S YRWQ +V+ D ELLL++KT      AL+ R++ LHPY VPE++   V +G+ AYLDW+R+ST
Sbjct:    8 TVPTEEKAREIARALVEERLAACVNILPGLTSVYRWQGEVVEDRELLLVVKTTTFRFPALKERVLSLHPYSVPEILALPVAEGHRAYLDWLREST 102          
BLAST of Gchil3238.t1 vs. uniprot
Match: UPI0019133988 (divalent-cation tolerance protein CutA n=1 Tax=Halochromatium salexigens TaxID=49447 RepID=UPI0019133988)

HSP 1 Score: 104 bits (259), Expect = 1.220e-25
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 0
Query:   82 VVMAVSTVPDEHVAASVSRALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRARLIQLHPYQVPELIVHAVTDGNDAYLDWVRQSTA 183
            V ++  T PD   A S+++ LV E L ACVNV+ G+ S YRWQ ++ TD+E+LLL+KT  + V AL AR+  LHPY VPE+I H +T GN  YLDWVRQ TA
Sbjct:   10 VYLSYCTCPDAKTAQSLAKTLVAEHLAACVNVLPGLVSVYRWQARIETDAEVLLLIKTTKARVAALAARIETLHPYDVPEVISHPITAGNTHYLDWVRQCTA 111          
The following BLAST results are available for this feature:
BLAST of Gchil3238.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVM2_9FLOR3.450e-3161.00Divalent-cation tolerance protein CutA n=1 Tax=Gra... [more]
A0A841H839_9BACT4.750e-2856.86Periplasmic divalent cation tolerance protein n=2 ... [more]
I4W3C3_9GAMM1.200e-2755.77CutA1 divalent ion tolerance protein n=3 Tax=Rhoda... [more]
UPI00190431971.310e-2758.33divalent-cation tolerance protein CutA n=2 Tax=Chr... [more]
A0A4R3YSZ7_9GAMM9.900e-2750.46Periplasmic divalent cation tolerance protein n=1 ... [more]
A0A328SX70_9GAMM1.480e-2658.33Divalent-cation tolerance protein CutA n=2 Tax=Ole... [more]
A0A3M2HXA2_9GAMM1.720e-2653.47Divalent-cation tolerance protein CutA n=1 Tax=Lys... [more]
UPI00178842E37.280e-2655.00divalent-cation tolerance protein CutA n=1 Tax=Dye... [more]
A0A0D6XCS2_THEFI8.670e-2653.68Cation tolerance protein CutA n=1 Tax=Thermus fili... [more]
UPI00191339881.220e-2553.92divalent-cation tolerance protein CutA n=1 Tax=Hal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004323Divalent ion tolerance protein, CutAPFAMPF03091CutA1coord: 84..180
e-value: 3.8E-33
score: 113.3
IPR004323Divalent ion tolerance protein, CutAPANTHERPTHR23419DIVALENT CATION TOLERANCE CUTA-RELATEDcoord: 19..182
IPR015867Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminalGENE3D3.30.70.120coord: 65..183
e-value: 2.1E-37
score: 129.3
NoneNo IPR availablePANTHERPTHR23419:SF8FI09726Pcoord: 19..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..68
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
IPR011322Nitrogen regulatory PII-like, alpha/betaSUPERFAMILY54913GlnB-likecoord: 82..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1206087..1206727 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3238.t1Gchil3238.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1206087..1206727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3238.t1 ID=Gchil3238.t1|Name=Gchil3238.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=186bp
MALRDPCFVGVAQRLAAAAALRVERSSTATVANRSALQAHCANNCGCVMR
YAFVVVVVATLLLATLSARGVSTQSNQRTAAVVMAVSTVPDEHVAASVSR
ALVEERLVACVNVVRGVSSTYRWQDKVITDSELLLLMKTRASLVHALRAR
LIQLHPYQVPELIVHAVTDGNDAYLDWVRQSTARE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004323Ion_tolerance_CutA
IPR015867N-reg_PII/ATP_PRibTrfase_C
IPR011322N-reg_PII-like_a/b