Gchil3119.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3119.t1
Unique NameGchil3119.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length333
Homology
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BLAST of Gchil3119.t1 vs. uniprot
Match: A0A2V3J3P9_9FLOR (SAP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3P9_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 1.200e-20
Identity = 101/356 (28.37%), Postives = 156/356 (43.82%), Query Frame = 0 
Query:    1 MKLSKLRVPDLRKELKARGLDEKGIRPVLIRRLREAVQREQNAENEQSTQADPQTANGD-QPTSVGQNLAYSDTQQQAASEKCSAEVPPKAMREYKHEDKIEARDPSPKRPYALNGRD-------GEPYSANK-----DTGKILPHMRPQYASETIGRPATEKDKTEASPASPAQDLSPKKPQTTDKGATSTSPSPPDQKNGIKVLENDGTGAPIEQPNMTASPSKNDKPTETKSSGNINSGDDVASVDRIRRRKKRFGIVMKEAANGDPTDDQAVQRRRARFGI--------KALVNSSSKTSKQDRDQ----IALRRRAEKFGLGGKKRATVDTSLSKEEIEKRLKRQKRFQSV 331
            MKLSK+RV DLRKELK RGLD+KG RP L++RLR+A++ ++ +  EQ+  A   +   D QPT       YSD +++           P  + + +     E  + +  R Y   G D        E +  +K     ++ +   H++ Q+                        +    +P+      T T       + G+K L  +G      +P   +       P++  ++ NI +  D  + +R+RRR +RFG V K       ++                     ++  N   K++K + DQ     A RRRA KFGL  KKR   D  LS +EIEKRLKRQ+RFQ+V
Sbjct:    1 MKLSKMRVADLRKELKRRGLDDKGTRPSLMKRLRDAMENDKKSTEEQAQNASNASIKHDAQPTEPNSTREYSDDRKKQR---------PNRLTDTEDRSNREHTEKAQNRTYERKGDDRXXXXXXDEHFDDDKRVLEENSRRNASHVKRQHREXXXXXXXXXXXXXXXXXXXXXXETRSNEPEAKQNKTTGTENESSTPERGVKDLTQNG------KPGKASH-----SPSKVNATCNIQNTRDTPTDERMRRRLERFGTVEKTETTDSLSEXXXXXXXXXXXXXXXXXXXAEESGANKMDKSAKSEADQHEVEAAKRRRALKFGLESKKRDFSDAGLSPDEIEKRLKRQRRFQNV 336
The following BLAST results are available for this feature:
BLAST of Gchil3119.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3P9_9FLOR1.200e-2028.37SAP domain-containing protein n=1 Tax=Gracilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..81
NoneNo IPR availablePANTHERPTHR46551SAP DOMAIN-CONTAINING RIBONUCLEOPROTEINcoord: 2..330
NoneNo IPR availablePANTHERPTHR46551:SF1SAP DOMAIN-CONTAINING RIBONUCLEOPROTEINcoord: 2..330
IPR003034SAP domainSMARTSM00513sap_9coord: 3..37
e-value: 4.4E-9
score: 46.2
IPR003034SAP domainPFAMPF02037SAPcoord: 3..36
e-value: 2.0E-10
score: 40.2
IPR003034SAP domainPROSITEPS50800SAPcoord: 3..37
score: 11.264544
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 1..53
e-value: 1.5E-10
score: 42.5
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 2..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:243307..244305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3119.t1Gchil3119.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 243307..244305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3119.t1 ID=Gchil3119.t1|Name=Gchil3119.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=333bp
MKLSKLRVPDLRKELKARGLDEKGIRPVLIRRLREAVQREQNAENEQSTQ
ADPQTANGDQPTSVGQNLAYSDTQQQAASEKCSAEVPPKAMREYKHEDKI
EARDPSPKRPYALNGRDGEPYSANKDTGKILPHMRPQYASETIGRPATEK
DKTEASPASPAQDLSPKKPQTTDKGATSTSPSPPDQKNGIKVLENDGTGA
PIEQPNMTASPSKNDKPTETKSSGNINSGDDVASVDRIRRRKKRFGIVMK
EAANGDPTDDQAVQRRRARFGIKALVNSSSKTSKQDRDQIALRRRAEKFG
LGGKKRATVDTSLSKEEIEKRLKRQKRFQSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf