Gchil3033.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3033.t1
Unique NameGchil3033.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length494
Homology
BLAST of Gchil3033.t1 vs. uniprot
Match: A0A2V3IGL4_9FLOR (Sonic hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGL4_9FLOR)

HSP 1 Score: 349 bits (896), Expect = 2.240e-112
Identity = 224/452 (49.56%), Postives = 285/452 (63.05%), Query Frame = 0
Query:   40 QPAQIPGLYENVALPPYSAACPDFVRVQQVEPVLSPLGVLYVIPHQFISVPFSGGGAQTCAASATTSKYTAASATILRRSADV-PLDTNNSLVAAFVAAREAFFLGQEAGDRVCGALLTTGGSVSMWVAPQRVVQAQAGRGFRINFRQGFKYVYYFANGAGSAPCLLRGDGAEQAQVVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTILSPVP----VETAALSGGA-LDAAPDVGDIAGVLDAGA----NVEAVEDVDDAV--EVLETSERAACFPAHSMVWRKHDRV-RMDAVRVGDAILANDLTHSTVVVAFTHASGGVWTRMVQLHTQHNRTLTLSRGHLALTRAREV---AAEHVRVGDVLTDVQFGASAVTRVSWRRVRGLYNPQPTAGRLVVDGVVVSAYTRATPSLSSAHALLAPLRALHAL 475
            Q  QIPGLY N+ +PPYSAAC D +R++QVEP LS +G+L +IPHQ +S+PF GGG Q C AS  +S  TA SAT+LRRS D+ PLD+NN+L+  F+ A E+FFLG E G R CG L     SVSMWVAP+RVVQ+QAG  FR+NF+ G KY+YYF+    S+PC+ RG+  EQAQ V V    XXXXXXXXXXXXXX                             VT+LSP+P    +  A L   A LD  P  G   GV   GA     ++ V+ +DD      ++T+ + ACFPA   VW    RV RM++V++ D +L +D    + +++FTH +  V  R V++HTQH R+LTLS GH+ L   RE+    A+ VRVGD LTDV+ GASAVT V W   RGL+NPQP  GRLVV G+VVSAYT A P+   AHALL PLR ++AL
Sbjct:   44 QTTQIPGLYRNIPIPPYSAACGDAIRIRQVEPTLSTVGLLLIIPHQLVSLPFDGGGEQKCTASEVSSPVTATSATVLRRSKDLTPLDSNNTLIRDFILADESFFLGVEVGARRCGGLALASDSVSMWVAPKRVVQSQAGSNFRVNFKPGSKYIYYFST---SSPCVYRGNANEQAQFVNVPRPSXXXXXXXXXXXXXXVETAD------------------------VTLLSPIPLPPGISPAPLGAPAPLDTGPVAGGGEGVASVGAPALNGLDGVQLLDDGSVQSFVDTASQRACFPAGEQVWLSDGRVVRMESVKLHDEVLVDDSGGGSAIMSFTHRNSIVLARFVRIHTQHKRSLTLSGGHIVLV-GREMKAKTAQEVRVGDSLTDVEHGASAVTNVEWVVRRGLFNPQPVQGRLVVHGIVVSAYTSALPNSGCAHALLTPLRFVYAL 467          
BLAST of Gchil3033.t1 vs. uniprot
Match: A0A1X6NWZ1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWZ1_PORUM)

HSP 1 Score: 98.2 bits (243), Expect = 4.890e-18
Identity = 77/186 (41.40%), Postives = 96/186 (51.61%), Query Frame = 0
Query:  304 EAVEDVDDA---VEVLETSERAACFPAHSMVWRKHDR-VRMDAVRVGDAILANDLTHSTVVVAFTHASGGVWTRMVQLHTQ--------HNRTLTLSRGHLALTRAREVAAEHVRVGDVLTDVQFGASAVTRVSWRRVRGLYNPQPTAGRLVVDGVVVSAYTRAT-PSLSSAHALLAPLRALHALG 476
            + V D+ DA   V  + ++  AACFPA + V       VRMDA+ VGDA+       S V  AFTHA     +  V+L           H  +L L+ GH         AA  V VGD L      A+ VT+VS  R  GLYNPQ   G ++VDG+V S YT A  P L  AHA LAPLRAL+A+G
Sbjct:  451 DTVTDIADAATQVAEILSNATAACFPADATVTLASGAAVRMDALAVGDAVAVGGGRFSEVF-AFTHADAAAVSAFVELTVASPADACAAHPTSLRLTPGHYLSVNGGLAAASTVVVGDRLVRADGSAAVVTQVSAARRAGLYNPQTVDGAILVDGIVTSTYTTAVEPRL--AHAALAPLRALYAVG 633          
BLAST of Gchil3033.t1 vs. uniprot
Match: A0A1X6PIP5_PORUM (DOMON domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIP5_PORUM)

HSP 1 Score: 94.7 bits (234), Expect = 2.280e-17
Identity = 72/164 (43.90%), Postives = 89/164 (54.27%), Query Frame = 0
Query:  318 TSERAACFPAHSMVWRKHDR-VRMDAVRVGDAILANDLTHS-TVVVAFTHASGGVWTRMVQLHTQHNRT-LTLSRGHLA-LTRAREVAAEHVRVGDVLTDVQFGASA-VTRVSWRRVRGLYNPQPTAGRLVVDGVVVSAYTRATPSLSSAHALLAPLRALHALG 476
            + + +ACFPA + V       VRMDA+RVGDA+ +  +  + T V  FTHA  G  +R V L T   R  L +S GH   L   R  AA  V VGD L D   GA+  VT VS     GLYNPQ  +G L VDG  VS YT A    + A A LAP+RA + +G
Sbjct:  174 SDDESACFPASATVRATSGADVRMDALRVGDAVASAAVGGAITDVFLFTHADAGAVSRFVVLATGGGRRPLVVSPGHYVYLAGGRTAAARTVVVGDALVDAATGAAVRVTAVSSAVAAGLYNPQTLSGDLAVDGYAVSTYTTAVAP-AFAEAALAPVRAAYGMG 336          
BLAST of Gchil3033.t1 vs. uniprot
Match: F0YF78_AURAN (HintN domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YF78_AURAN)

HSP 1 Score: 74.7 bits (182), Expect = 1.990e-10
Identity = 55/140 (39.29%), Postives = 65/140 (46.43%), Query Frame = 0
Query:  324 CFPAHSMVWRKHDRVRMDAVRVGDAILANDLTHSTV---VVAFTHASGGVWTRMVQLHTQHNRTLTLSRGHLALTRAREVA-AEHVRVGDVLT-----DVQFGASAVTRVSWRRVRGLYNPQPTAGRLVVDGVVVSAYTR 454
            CFPAH+         R DA+R GDA+LA D   S     V    HA  G     V+L     R LTL+RGH   T  R V  A  V  GD L+            AV  V+  R  GL+ P    GR+VVDGVV S Y+R
Sbjct:  163 CFPAHATFLVDGSPTRADALRPGDAVLAVDAAGSAAYAPVELRAHADAGAEATFVRLELAGGRALTLTRGHYVPTANRGVLEAGAVAAGDELSILAADGATLARDAVVAVAAARHAGLFAPLTKHGRVVVDGVVASEYSR 302          
BLAST of Gchil3033.t1 vs. uniprot
Match: A0A7S1T5T4_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5T4_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 1.560e-9
Identity = 61/162 (37.65%), Postives = 81/162 (50.00%), Query Frame = 0
Query:  323 ACFPAHSMVWRKHDR-VRMDAVRVGDAILANDLTHSTVVVAFTHAS--GGVWTRMV---QLHTQHNRTLTLSRGHLALTRARE-VAAEHVRVGDVL---TDVQFGASAVTRVSWRRVRGLYNPQPTAGRLVVDGVVVSAYTRATPSLSSAHALLAPLRALHA 474
            ACF A S+V R     VRMD +++GD I  +  T    V  F+H    G    R +    L TQ    L +S  H  +TR +  + A  V  G VL   T      + V  V   R +GL+NP    GRLVV+G++ S YTRA P    AH+LL P+R+L A
Sbjct:   51 ACFAADSIVERSDGSLVRMDQLQLGDYIRVS-ATEFAPVFGFSHRDPRGLYEFRRIGAKDLRTQAIFYLQVSESHYLVTRKQSLILAGDVEPGSVLYTVTSTGLHEAEVVSVDHVRSQGLFNPHTADGRLVVNGILASCYTRAVPPCL-AHSLLLPVRSLFA 210          
BLAST of Gchil3033.t1 vs. uniprot
Match: A0A2V3IY90_9FLOR (Hint domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY90_9FLOR)

HSP 1 Score: 69.3 bits (168), Expect = 3.240e-9
Identity = 55/161 (34.16%), Postives = 79/161 (49.07%), Query Frame = 0
Query:  314 EVLETSERAACFPAHSMVWRKHDRVRMDAVRVGDAILANDLTHSTVVVAFTHASGGV--WTRMVQLHTQHNRTLTLSRGHLALTRAREVAAEHVRVGDVLTDVQFGASAVTRVS--WRRVRGLYNPQPTAGRLVVDGVVVSAYTRATPSLSSAHALLAPLR 470
            E  +  +   CFPA + V  +H   R     +  A L  D    T  + +TH       W   + L    N + T+S GH   ++   + A+ + VG +L    +G   VT V   WRR  GLYN Q  +GRL+VD ++ S YT+A P +  AHALLAP+R
Sbjct:  169 EEFDRQKGEKCFPASATVTTQHGAPRR-IQHLATAQLVADGRAFTHTIGWTHRDPHFEGWFLRISLR---NVSATMSHGHYVYSKRGLITADELAVGTMLRTA-YGWQPVTAVERVWRR--GLYNVQTASGRLLVDHILCSTYTKAVPPVL-AHALLAPVR 321          
BLAST of Gchil3033.t1 vs. uniprot
Match: A0A2V3II69_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II69_9FLOR)

HSP 1 Score: 65.1 bits (157), Expect = 1.420e-7
Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 0
Query:  324 CFPAHSMVWRKHDRVR-MDAVRVGDAI-LANDLTHSTVVVAFTHASGGVWTRMVQLHTQHNRTLTLSRGHLALTRAREVAAEHVRVGDVLTDVQFGASAVTRVSWRRVRGLYNPQPTAGRLVVDGVVVSAYTRATPSLSSAHALLAPLRALH 473
            CF   ++V      ++ M  + VGD + +A +L  STVV  FTH    +    V +  Q  R + L+  HL       V A H+ VG  +  +      +  VS     GLYNPQ   G + V+G   S +T A     +AHAL+APLRAL+
Sbjct:  331 CFHPENVVHLADGSLKPMHQLAVGDRVQVAPNL--STVVFMFTHRDASLRAAFVNVSVQSGRHIVLTPSHLMYGVHGAVEARHMAVGSSIQMMDGAFERIVSVSSFTGYGLYNPQTMDGDIAVNGFRASTFTTAVEK-KTAHALMAPLRALY 479          
BLAST of Gchil3033.t1 vs. uniprot
Match: A0A1X6NVT7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVT7_PORUM)

HSP 1 Score: 62.8 bits (151), Expect = 1.310e-6
Identity = 50/101 (49.50%), Postives = 55/101 (54.46%), Query Frame = 0
Query:  385 LTLSRGHLALTRARE--VAAEHVRVGDVLTDVQFGASAVTRV--SWRRVRGLYNPQPTAGRLVVDGVVVSAYTRATPSLSSAHALLAPLRALHALGARRTL 481
            LTL+ GHL     R   VAA  +  GD LT        VT V  S R V GLYNP PTAG LVVDGV VSAYT A P+   AH  LAP R   +  A  T+
Sbjct:  865 LTLTGGHLLPVPPRGDLVAAATLGPGDRLTLADGTPGVVTAVDASVRGV-GLYNPHPTAGSLVVDGVAVSAYTTALPA-GVAHGALAPARVARSAAAHATI 963          
BLAST of Gchil3033.t1 vs. uniprot
Match: E2FMT1_PLADU (Hedgehog protein n=1 Tax=Platynereis dumerilii TaxID=6359 RepID=E2FMT1_PLADU)

HSP 1 Score: 61.6 bits (148), Expect = 1.540e-6
Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 0
Query:  324 CFPAHSMVWRKHDR-VRMDAVRVGDAILANDLTHSTV---VVAFTHASGGVWTRMVQLHTQHNRTLTLSRGHLALTRARE-----------VAAEHVRVGDVLTDV---------QFGASAVTRVSWRRVRGLYNPQPTAGRLVVDGVVVSAYTRATPSLSSAHALLAPLR 470
            CFP+  +      R V MDA+ VGD++LA D   S +   VV F  A G     M  + T+  R LTL+ GH+  + +             V A  +R GD +  +         ++    V R+   +  G++ P    G +VVDGV+VS Y     S++ AH   AP R
Sbjct:  202 CFPSTGLATLSDGRGVTMDALHVGDSVLAMDTDGSAIYSKVVMFMDARGERQQLMYTITTEAGRELTLTPGHMVYSTSENYKDASPKDLHPVFASRIREGDYIFVLDTTTRWQSHRWRPEKVVRLQTSKQNGVFAPLTDHGNMVVDGVLVSCYAM-IDSVNIAHWSFAPYR 371          
The following BLAST results are available for this feature:
BLAST of Gchil3033.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IGL4_9FLOR2.240e-11249.56Sonic hedgehog protein A n=1 Tax=Gracilariopsis ch... [more]
A0A1X6NWZ1_PORUM4.890e-1841.40Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PIP5_PORUM2.280e-1743.90DOMON domain-containing protein n=1 Tax=Porphyra u... [more]
F0YF78_AURAN1.990e-1039.29HintN domain-containing protein n=1 Tax=Aureococcu... [more]
A0A7S1T5T4_9RHOD1.560e-937.65Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A2V3IY90_9FLOR3.240e-934.16Hint domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3II69_9FLOR1.420e-733.55Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A1X6NVT7_PORUM1.310e-649.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
E2FMT1_PLADU1.540e-630.41Hedgehog protein n=1 Tax=Platynereis dumerilii Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 322..415
e-value: 0.0019
score: 27.4
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 324..453
e-value: 7.1E-25
score: 90.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..268
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 320..475
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..493
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availableCDDcd00081Hintcoord: 324..450
e-value: 1.61372E-8
score: 51.1158
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 319..476
e-value: 3.2E-19
score: 69.3
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 324..452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:1206610..1208091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3033.t1Gchil3033.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 1206610..1208091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3033.t1 ID=Gchil3033.t1|Name=Gchil3033.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=494bp
MKRAGAGMVALCLSLGAALRAAAAAASAQANARDMGRDMQPAQIPGLYEN
VALPPYSAACPDFVRVQQVEPVLSPLGVLYVIPHQFISVPFSGGGAQTCA
ASATTSKYTAASATILRRSADVPLDTNNSLVAAFVAAREAFFLGQEAGDR
VCGALLTTGGSVSMWVAPQRVVQAQAGRGFRINFRQGFKYVYYFANGAGS
APCLLRGDGAEQAQVVAVATPSASPSASGAPVVVGGLGDGDGDGDGDGDA
DADADADEDEDEDEDVTILSPVPVETAALSGGALDAAPDVGDIAGVLDAG
ANVEAVEDVDDAVEVLETSERAACFPAHSMVWRKHDRVRMDAVRVGDAIL
ANDLTHSTVVVAFTHASGGVWTRMVQLHTQHNRTLTLSRGHLALTRAREV
AAEHVRVGDVLTDVQFGASAVTRVSWRRVRGLYNPQPTAGRLVVDGVVVS
AYTRATPSLSSAHALLAPLRALHALGARRTLCALATLTRLYTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf