Gchil3025.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3025.t1
Unique NameGchil3025.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length358
Homology
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A2V3IZH5_9FLOR (Protein SUPPRESSOR OF FRI 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZH5_9FLOR)

HSP 1 Score: 138 bits (348), Expect = 3.890e-34
Identity = 125/383 (32.64%), Postives = 175/383 (45.69%), Query Frame = 0
Query:    1 MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYASLDDPHLPKRSRNAHLSPTALPNTFPTNAYVDVRSAHA--ASSPAASLPPYSAPHLYSYPPQPATHAVSYSQHGTHYNYSQPTSNHPAPNYAYPYNASQPXXXXXXXXXXXXXXXXXXNASLDASQYANYTQPTSYNYQSATRLPPLRAA---YPTTALPSYTQSQLPTTNPIAP---YTS-AEPARSPSSHFNNYAPQKGINTHQYQTHAAAQQLYPSQPASDVVTPPPASAP-------------PPVPQ--------SKLIFEST-CSPEEERAQLPRYMTKPR 352
            MGR+KKR+AP+A +RIFCYYCDR F  EQELL+HQ++KHLR                 A+QMHNTR+ +VPN++PGR+S+ ++VLGM GIPDS+YA+LD               T  P  +P      + SA    A SP A  P   APHL      PA ++ +        +  QP  N   P YAY  + SQP                    +     +A  T P   +        P +A     P+  +P  + S +    P  P   YT+ +EP  +P ++    +PQ  +         +A++L P    S  +   P  A              PP+PQ         +++FES   SPEE+RA LPRY T+ R
Sbjct:    1 MGRKKKRSAPSAFDRIFCYYCDRTFHLEQELLSHQRDKHLRCSVCSKRMISVQSMVVHAEQMHNTRIQTVPNAVPGRDSITIEVLGMKGIPDSYYAALDSDR------------TKRPRQYPAPVEPPLYSATPPFAPSPHAIHPTQHAPHL------PAPYSSAPVSPYRIPSLRQPGPNPSLPTYAYFPSVSQPHGPRPYALSAYPSTAPRTGLADSRPYHAYTTPPLGSSGVGICPTTPTQAPSMPMPSAPIPIKSSSYI-APGPACPPGRYTAVSEPGAAPYAY---PSPQTSL-----PIQVSAEKLVPQTNRSPYLPVRPVEASMGFGRYEQRPLGQPPIPQHPPPVVTLDRVLFESRHMSPEEQRALLPRYRTELR 356          
BLAST of Gchil3025.t1 vs. uniprot
Match: D0MWC9_PHYIT (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MWC9_PHYIT)

HSP 1 Score: 84.3 bits (207), Expect = 5.760e-15
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 0
Query:    1 MGRRKKR---AAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYASLDDPHLPKRSR 108
            MG++K+R   A   A+ RIFCYYCDRNF  E+ L+ HQK +H +                   Q+H   + S+PN+ PG+ESV V+V GM G+PD+      D ++PK+ R
Sbjct:    1 MGKKKRRDDGAGEAAQRRIFCYYCDRNFDDEKVLILHQKARHFKCPACHKKLSTISGMIIHTQQVHKETLQSIPNAKPGKESVDVEVYGMEGVPDA------DGNVPKKPR 105          
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A438E4P3_VITVI (Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4P3_VITVI)

HSP 1 Score: 79.7 bits (195), Expect = 8.660e-15
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 0
Query:    1 MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYAS 97
            MG++KKRAA     ++FCYYC+R F+ E+ L+ HQK KH +                   Q+H   V+ VPN+ PGRES  +++ GM GIPD   A+
Sbjct:    1 MGKKKKRAA-----KVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKETVSKVPNANPGRESTEIEIFGMQGIPDDILAA 92          
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A329STQ4_9STRA (C2H2-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329STQ4_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.450e-14
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    1 MGRRKKR---AAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYASLDDPHLPKRSR 108
            MG++K+R   A    + RIFCYYCDRNF  E+ L+ HQK +H +                   Q+H   + S+PN+ PG+ESV V+V GM G+PD+      D ++PK+ R
Sbjct:    1 MGKKKRRDDGAGEATQRRIFCYYCDRNFDDEKVLILHQKARHFKCPTCHKKLSTISGMIIHTQQVHKETLKSIPNAKPGKESVEVEVYGMEGVPDA------DGNVPKKPR 105          
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A438J3X1_VITVI (Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J3X1_VITVI)

HSP 1 Score: 79.7 bits (195), Expect = 2.280e-14
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 0
Query:    1 MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYAS 97
            MG++KKRAA     ++FCYYC+R F+ E+ L+ HQK KH +                   Q+H   V+ VPN+ PGRES  +++ GM GIPD   A+
Sbjct:    1 MGKKKKRAA-----KVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKETVSKVPNANPGRESTEIEIFGMQGIPDDILAA 92          
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A2D4C0B5_PYTIN (Protein SUPPRESSOR OF FRI 4-like isoform X3 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0B5_PYTIN)

HSP 1 Score: 83.2 bits (204), Expect = 2.980e-14
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    1 MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYASLDDPHLPKRSR 108
            MG++KKR    A+ RI+CYYC+RNF  E+ L+ HQK +H +                   Q+H    T+VPN+ PGRESV +++ GM G+P    A  DDP+  KR+R
Sbjct:   24 MGKKKKRDDVQAQRRIYCYYCERNFDDEKILIQHQKARHFKCHICHKKLSTASGMVIHMMQVHKETCTTVPNAKPGRESVDIEIYGMEGVPGE-PAPYDDPN--KRAR 128          
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A0W8DFI2_PHYNI (6-hydroxy-D-nicotine oxidase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DFI2_PHYNI)

HSP 1 Score: 80.9 bits (198), Expect = 7.900e-14
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    1 MGRRKKR---AAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDS 93
            MG++K+R   A    + RIFCYYCDRNF  E+ L+ HQK +H +                   Q+H   + S+PN+ PG+ESV V+V GM G+PD+
Sbjct:    1 MGKKKRRDDGAGEATQRRIFCYYCDRNFDDEKVLILHQKARHFKCPTCHKKLSTISGMIIHTQQVHKETLKSIPNAKPGKESVEVEVYGMEGVPDA 96          
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A2G9HIC1_9LAMI (Zn finger protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HIC1_9LAMI)

HSP 1 Score: 82.0 bits (201), Expect = 1.250e-13
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = 0
Query:    1 MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYASL---DDPHLPKRSRNAHLSPTALPNTFPTNAYVDVRSAHAASSPAASLPPYSAPHL------YSYPPQPAT 159
            MG++KKR A    ++++CYYCDR F+ E+ L+ HQK KH +                   Q+H  +V+ VPN+ PGRES  +++ GM GIP    A+    ++   P ++    LS + +    P +  V      A SS    +PP+  P +      +  PP+P T
Sbjct:    1 MGKKKKRGAI---DKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEQVSKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGEEEEETPSKTAKVDLSTSQISGAIPGSIGVGFPPQPAVSS----VPPFYNPRIPVPPAGWQVPPRPQT 161          
BLAST of Gchil3025.t1 vs. uniprot
Match: A0A7J7CHP5_TRIWF (BED-type domain-containing protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CHP5_TRIWF)

HSP 1 Score: 79.7 bits (195), Expect = 1.780e-13
Identity = 40/97 (41.24%), Postives = 53/97 (54.64%), Query Frame = 0
Query:    1 MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYAS 97
            MG++KKRA+ N    ++CYYCDR F  E+ L+ HQK KH +                   Q+H   VT VPN+ PGRES  +D+ GM GIP    A+
Sbjct:    1 MGKKKKRASSN----VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMAIHVLQVHKENVTKVPNAKPGRESTEIDIYGMQGIPQDVLAA 93          
BLAST of Gchil3025.t1 vs. uniprot
Match: D7TUG1_VITVI (BED-type domain-containing protein n=8 Tax=Vitis TaxID=3603 RepID=D7TUG1_VITVI)

HSP 1 Score: 81.3 bits (199), Expect = 1.840e-13
Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 0
Query:    1 MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRXXXXXXXXXXXXXXXXXADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYASL---DDPHLPKRSRNAHLSPTALPNTFP 122
            MG++KKRAA     ++FCYYC+R F+ E+ L+ HQK KH +                   Q+H   V+ VPN+ PGRES  +++ GM GIPD   A+     D   P +     + PT +    P
Sbjct:    1 MGKKKKRAA-----KVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKETVSKVPNANPGRESTEIEIFGMQGIPDDILAAHYGEQDEDNPSKLAKVEVPPTNVVGVMP 120          
The following BLAST results are available for this feature:
BLAST of Gchil3025.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZH5_9FLOR3.890e-3432.64Protein SUPPRESSOR OF FRI 4 n=1 Tax=Gracilariopsis... [more]
D0MWC9_PHYIT5.760e-1539.64C2H2-type domain-containing protein n=10 Tax=Phyto... [more]
A0A438E4P3_VITVI8.660e-1540.21Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera... [more]
A0A329STQ4_9STRA1.450e-1438.74C2H2-type domain-containing protein n=1 Tax=Phytop... [more]
A0A438J3X1_VITVI2.280e-1440.21Protein suppressor of FRI 4 n=1 Tax=Vitis vinifera... [more]
A0A2D4C0B5_PYTIN2.980e-1440.74Protein SUPPRESSOR OF FRI 4-like isoform X3 n=1 Ta... [more]
A0A0W8DFI2_PHYNI7.900e-1440.636-hydroxy-D-nicotine oxidase n=1 Tax=Phytophthora ... [more]
A0A2G9HIC1_9LAMI1.250e-1330.95Zn finger protein n=1 Tax=Handroanthus impetiginos... [more]
A0A7J7CHP5_TRIWF1.780e-1341.24BED-type domain-containing protein n=1 Tax=Tripter... [more]
D7TUG1_VITVI1.840e-1335.20BED-type domain-containing protein n=8 Tax=Vitis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 40..63
e-value: 2.4
score: 17.2
coord: 16..39
e-value: 2.2
score: 17.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..63
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 18..39
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 16..39
score: 9.016026
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 2..66
e-value: 2.2E-5
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..185
NoneNo IPR availablePANTHERPTHR23215ZINC FINGER PROTEIN 207coord: 1..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:1155013..1156086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3025.t1Gchil3025.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 1155013..1156086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3025.t1 ID=Gchil3025.t1|Name=Gchil3025.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=358bp
MGRRKKRAAPNARERIFCYYCDRNFQQEQELLAHQKEKHLRCPFCTKRML
SIQSLLVHADQMHNTRVTSVPNSIPGRESVAVDVLGMTGIPDSFYASLDD
PHLPKRSRNAHLSPTALPNTFPTNAYVDVRSAHAASSPAASLPPYSAPHL
YSYPPQPATHAVSYSQHGTHYNYSQPTSNHPAPNYAYPYNASQPNYNAAQ
ALYPSTSAPQPYNASLDASQYANYTQPTSYNYQSATRLPPLRAAYPTTAL
PSYTQSQLPTTNPIAPYTSAEPARSPSSHFNNYAPQKGINTHQYQTHAAA
QQLYPSQPASDVVTPPPASAPPPVPQSKLIFESTCSPEEERAQLPRYMTK
PRCASTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type