Gchil3008.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3008.t1
Unique NameGchil3008.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length243
Homology
BLAST of Gchil3008.t1 vs. uniprot
Match: A0A2V3IHL1_9FLOR (Mitochondrial metalloendopeptidase OMA1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHL1_9FLOR)

HSP 1 Score: 281 bits (718), Expect = 2.500e-92
Identity = 133/230 (57.83%), Postives = 182/230 (79.13%), Query Frame = 0
Query:    1 MQLGADAYHQLLRAIEPSLLPPSDRRTRRARAVVVRLAAACQAFDPALTAGFKWSVAVSHDDAPNAVCVPGGRIMLTTGLLRMCA-EEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQRAAQLKNKSAEMAVRYQHKCASTQ 229
            M+LG   Y +L+ +++ ++L P+D  + RAR VV RLA AC+  D  L+ GFKWSVAV  DD PNAVCVPGGR+++TTGLLR+C+ +EE+AMVL+HEIAHA+NRHSAEKMQ+  L+ P+ ++L+ V +SH MSAS+++LLLELP+GR LEREAD VG+I++TEACYDPRK P +FDKLA VT E++G W++  VKS+ STHPMS +RA QL+ ++A +A+R+  +C   Q
Sbjct:    7 MELGRRTYDELIHSVQRAVLEPNDAHSLRARRVVTRLARACKGLDAELSKGFKWSVAVCEDDMPNAVCVPGGRMLVTTGLLRLCSCDEEVAMVLSHEIAHAINRHSAEKMQVQMLMLPLVVVLSAVLSSHMMSASVSKLLLELPYGRKLEREADAVGLIVMTEACYDPRKGPVVFDKLAAVTREEEGGWISKRVKSMVSTHPMSKERAWQLRQQAAALALRFDERCVGAQ 236          
BLAST of Gchil3008.t1 vs. uniprot
Match: UPI001891E830 (mitochondrial metalloendopeptidase OMA1-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI001891E830)

HSP 1 Score: 127 bits (320), Expect = 3.630e-33
Identity = 65/157 (41.40%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   51 GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLL-RMCAEEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQR 206
            GFKW V V  +   NA+C PGG+I++ TGLL +   + E+A VL HE+AHA+ RH+AEK+  H  ++ + + L    ++  +   LT  LL LPF R +E EADH+G+++L  A +DPR AP +++KL +V G       ++ +K   STHP S +R
Sbjct:    7 GFKWEVIVVDNKQVNAMCAPGGKIIVYTGLLDKFNTDAEIAAVLGHEVAHAIARHAAEKLTKHMWIFMLTVFLLIFIDAPDLIDKLTEYLLSLPFSRKMEIEADHIGIMLLASAGFDPRIAPKVYEKLGKVGGN------SSPLKEYMSTHPCSKKR 157          
BLAST of Gchil3008.t1 vs. uniprot
Match: A0A7S3EFT5_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFT5_9RHOD)

HSP 1 Score: 128 bits (322), Expect = 2.940e-32
Identity = 77/240 (32.08%), Postives = 124/240 (51.67%), Query Frame = 0
Query:    1 MQLGADAYHQLLRAIEPSLLPPSDRRTRRARAVVVRLAAACQAFDPALTAGFKWSVAVSHDDAPNAVCVPGGRIMLTTGLLRMC-AEEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQRAAQLKNKSAEMAVRYQHKCASTQHWIADTFAFA 239
            ++LG   + QL       +L  +   +RR   +  R+A   +  D      + W   V     PNA C+PGG+I + TG+L +   ++ELA VLAHE+ HAV RHSAE++    LL P+ LL+A + +++ ++  L  L + LP  R  E EAD++G+ ++T+ACYDP  +P+IF KL               +    STHP   +R   L+    E+   Y+ +C+ +    +   AF+
Sbjct:   67 LKLGESQFSQLKNQFRGHVLSQASPPSRRVERIGRRIARVSEQDD------YDWEFVVFERAEPNAFCLPGGKIGVFTGMLDLADTDDELAAVLAHEVGHAVARHSAEQVSRMFLLIPVRLLMAFILDTYVLNDILVNLFILLPSSRRNEMEADYIGLRLMTKACYDPHGSPAIFTKLGEYAKRNP-----MKIPEYLSTHPADDRRITTLEGLLPEVLEEYETQCSPSVRRFSRMSAFS 295          
BLAST of Gchil3008.t1 vs. uniprot
Match: A0A0E0K501_ORYPU (Peptidase_M48 domain-containing protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0K501_ORYPU)

HSP 1 Score: 129 bits (323), Expect = 7.560e-32
Identity = 69/181 (38.12%), Postives = 108/181 (59.67%), Query Frame = 0
Query:   51 GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLLRMCAEE-ELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQRAAQLKN-KSAEMAVRYQHKCASTQ 229
            G  W V V  DD  NA+C+PGG+I++ TGLL     + E+A VL HE+ HA+ RHSAE +  +   W + +++        M  +++ LLL+LPF R +E EADH+G+++L  A YDPR APS+++KL ++ G+         + +  STHP + +RA  L+  K  + A+R   + +S Q
Sbjct:  180 GLNWEVIVVRDDLVNAMCLPGGKIIVFTGLLNHFKNDAEIATVLGHEVGHAIARHSAETITKNLWFWILQIVILQFIYMPDMINAMSTLLLKLPFSRRMEIEADHIGLLLLAAAGYDPRVAPSVYEKLGKIAGDSA-------LSNYLSTHPSAKKRAQLLRQAKVMDEALRLYREVSSGQ 353          
BLAST of Gchil3008.t1 vs. uniprot
Match: A0A453Q433_AEGTS (Peptidase_M48 domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453Q433_AEGTS)

HSP 1 Score: 127 bits (318), Expect = 1.220e-31
Identity = 65/157 (41.40%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   51 GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLL-RMCAEEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQR 206
            GFKW V V  +   NA+C PGG+I++ TGLL +   + E+A VL HE+AHA+ RH+AEK+  H  ++ + + L    ++  +   LT  LL LPF R +E EADH+G+++L  A +DPR AP +++KL +V G       ++ +K   STHP S +R
Sbjct:  120 GFKWEVIVVDNKQVNAMCAPGGKIIVYTGLLDKFNTDAEIATVLGHEVAHAIARHAAEKLTKHMWIFMLTVFLLIFIDAPDLIDKLTEYLLGLPFSRKMEIEADHIGIMLLASAGFDPRIAPKVYEKLGKVGGN------SSPLKEYMSTHPCSKKR 270          
BLAST of Gchil3008.t1 vs. uniprot
Match: A0A316ZB30_9BASI (Peptidase_M48 domain-containing protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZB30_9BASI)

HSP 1 Score: 128 bits (322), Expect = 1.360e-31
Identity = 76/207 (36.71%), Postives = 119/207 (57.49%), Query Frame = 0
Query:    2 QLGADAYHQLLRAIEPSLLPPSDRRTRRARAVVVRLAAACQAFDPALTA-GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLLRMCAEEE-LAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQR 206
            Q+G DAY Q L+     L P +  +TRR RAV  RL    +  D  +T  G +W V V + +  NA  +P G+I + +G+L +C +++ LA VL HEI+H + RHSAEK     +L   AL+         +S +   LLL LP  R +E EADH+G+ ++++AC+DPR+AP ++   +R+   + G      +K + STHP+++ R
Sbjct:  124 QMGDDAYKQTLQEYRSRLEPSNSAQTRRVRAVAERL---IRTLDGEVTTRGIEWDVHVVNVNEKNAFVLPNGKIFVMSGILGICKDDDGLATVLGHEISHTIARHSAEKASGFKVLMAFALVAELCGLDIGISRAAATLLLSLPNSRKMETEADHMGLELMSKACFDPREAPHLW---SRMQASEGGSGRGDVIKGLVSTHPVNSAR 324          
BLAST of Gchil3008.t1 vs. uniprot
Match: M2XY90_GALSU (Metallopeptidase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY90_GALSU)

HSP 1 Score: 128 bits (321), Expect = 2.800e-31
Identity = 73/226 (32.30%), Postives = 120/226 (53.10%), Query Frame = 0
Query:    1 MQLGADAYHQLLRAIEPSLLPPSDRRTRRARAVVVRLAAACQAFDPALTAGFKWSVAVSHDDAPNAVCVPGGRIMLTTGLLRMC-AEEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQRAAQLKNKSAEMAVRYQHKC 225
            + LG   + ++L      ++P S   + R   +  RLA      D      F W   V      NA C+PGG++++ TGLL +   ++ LA VLAHEI HAV RH AEK+    +L+ +  ++    N+H +++ +  +L  LPF R LE EAD++G+ ++ +ACYDPR+AP +F+++A+        +L        STHP    R  +L++   ++   Y+ KC
Sbjct:  162 VSLGTQQFRKVLAMEASHVVPSSHPLSVRILRIGQRLAKVADQKD------FHWEFVVIDKPVANAFCLPGGKVVVYTGLLPITPTDDALASVLAHEIGHAVARHGAEKLAFMKVLFILQFIVNIFVNTHALNSFMINILANLPFSRKLETEADYIGLHLMAKACYDPREAPHVFERIAKRNVNSPPEYL--------STHPADKHRVERLQSWLPQVLPEYEEKC 373          
BLAST of Gchil3008.t1 vs. uniprot
Match: I1P405_ORYGL (Peptidase_M48 domain-containing protein n=12 Tax=Oryza TaxID=4527 RepID=I1P405_ORYGL)

HSP 1 Score: 128 bits (322), Expect = 4.300e-31
Identity = 69/181 (38.12%), Postives = 108/181 (59.67%), Query Frame = 0
Query:   51 GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLLR-MCAEEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQRAAQLKN-KSAEMAVRYQHKCASTQ 229
            G  W V V  DD  NA+C+PGG+I++ TGLL     + E+A VL HE+ HA+ RH+AE +  +   W + +++        M  +++ LLL+LPF R +E EADH+G+++L  A YDPR APS+++KL ++ G+         + +  STHP S +RA  L+  K  + A+R   + +S Q
Sbjct:  269 GLNWEVIVVRDDLINAMCLPGGKIVVFTGLLNHFKTDAEIATVLGHEVGHAIARHAAEMITKNLWFWILQIVIMQFIYMPDMINAMSTLLLKLPFSRRMEIEADHIGLLVLGAAGYDPRVAPSVYEKLGKIAGDST-------LSNYLSTHPSSKKRAQLLRQAKVMDEALRLYREVSSGQ 442          
BLAST of Gchil3008.t1 vs. uniprot
Match: UPI001ADC253A (mitochondrial metalloendopeptidase OMA1 n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADC253A)

HSP 1 Score: 127 bits (320), Expect = 8.510e-31
Identity = 65/162 (40.12%), Postives = 99/162 (61.11%), Query Frame = 0
Query:   51 GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLL-RMCAEEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQRAAQLK 211
            G  W V V  DD  NA+C+PGG+I++ TGLL     + E+A VLAHE+ HA+ RHSAE +  +   W + +++        +  +++ LLL LPF R +E EADH+G+++L  A YDPR APS+++KL ++ G+         + +  STHP S +RA  L+
Sbjct:  271 GLNWEVIVVRDDLVNAMCLPGGKIVVFTGLLDHFKTDAEIATVLAHEVGHAIARHSAEMITKNMWFWVLQIVILQFIYMPDLINAMSTLLLRLPFSRRMEIEADHIGLLLLGAAGYDPRIAPSVYEKLGKIAGDSA-------LSNYLSTHPSSKKRAQLLR 425          
BLAST of Gchil3008.t1 vs. uniprot
Match: A0A835KSM1_9POAL (Peptidase_M48 domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835KSM1_9POAL)

HSP 1 Score: 127 bits (319), Expect = 1.080e-30
Identity = 74/176 (42.05%), Postives = 109/176 (61.93%), Query Frame = 0
Query:   51 GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLL-RMCAEEELAMVLAHEIAHAVNRHSAEKMQMHTLLWPIAL---LLATVFNSHFMSASLTRLLLELPFGRSLEREADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTHPMSAQRA-----AQLKNKSAEM 217
            G  W V V  DD  NA+C+PGG+I++ TGLL +  A+ E+A VLAHE+ HA+ RH+AEK+     +W   L   LL  ++    ++A  T LLL LPF R +E EADH+G+++L  A YDPR APS+++KL ++ G+         + +  STHP S +RA     AQ+ N++ E+
Sbjct:  264 GLNWEVIVVRDDLVNAMCLPGGKIVVFTGLLDKFRADAEVATVLAHEVGHAIARHAAEKIT--KTMWVAILQIVLLQFIYMPDLINAMST-LLLRLPFSRRMEIEADHIGLLLLASAGYDPRIAPSVYEKLGKIGGDSA-------LNNYLSTHPSSKKRAELLSRAQVMNEALEL 429          
The following BLAST results are available for this feature:
BLAST of Gchil3008.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHL1_9FLOR2.500e-9257.83Mitochondrial metalloendopeptidase OMA1 n=1 Tax=Gr... [more]
UPI001891E8303.630e-3341.40mitochondrial metalloendopeptidase OMA1-like n=1 T... [more]
A0A7S3EFT5_9RHOD2.940e-3232.08Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A0E0K501_ORYPU7.560e-3238.12Peptidase_M48 domain-containing protein n=1 Tax=Or... [more]
A0A453Q433_AEGTS1.220e-3141.40Peptidase_M48 domain-containing protein n=1 Tax=Ae... [more]
A0A316ZB30_9BASI1.360e-3136.71Peptidase_M48 domain-containing protein n=1 Tax=Ti... [more]
M2XY90_GALSU2.800e-3132.30Metallopeptidase n=1 Tax=Galdieria sulphuraria Tax... [more]
I1P405_ORYGL4.300e-3138.12Peptidase_M48 domain-containing protein n=12 Tax=O... [more]
UPI001ADC253A8.510e-3140.12mitochondrial metalloendopeptidase OMA1 n=1 Tax=Or... [more]
A0A835KSM1_9POAL1.080e-3042.05Peptidase_M48 domain-containing protein n=2 Tax=Di... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001915Peptidase M48PFAMPF01435Peptidase_M48coord: 28..212
e-value: 1.4E-25
score: 90.3
NoneNo IPR availableGENE3D3.30.2010.10Metalloproteases ("zincins"), catalytic domaincoord: 20..111
e-value: 1.7E-14
score: 55.6
NoneNo IPR availablePANTHERPTHR22726METALLOENDOPEPTIDASE OMA1coord: 2..224
NoneNo IPR availablePANTHERPTHR22726:SF1METALLOENDOPEPTIDASE OMA1, MITOCHONDRIALcoord: 2..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..140
NoneNo IPR availableCDDcd07331M48C_Oma1_likecoord: 45..212
e-value: 8.4452E-51
score: 161.976
NoneNo IPR availableTMHMMTMhelixcoord: 113..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:973954..974682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3008.t1Gchil3008.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 973954..974682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3008.t1 ID=Gchil3008.t1|Name=Gchil3008.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=243bp
MQLGADAYHQLLRAIEPSLLPPSDRRTRRARAVVVRLAAACQAFDPALTA
GFKWSVAVSHDDAPNAVCVPGGRIMLTTGLLRMCAEEELAMVLAHEIAHA
VNRHSAEKMQMHTLLWPIALLLATVFNSHFMSASLTRLLLELPFGRSLER
EADHVGMIILTEACYDPRKAPSIFDKLARVTGEQQGHWLATHVKSIASTH
PMSAQRAAQLKNKSAEMAVRYQHKCASTQHWIADTFAFASMQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001915Peptidase_M48