Gchil2996.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2996.t1
Unique NameGchil2996.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length433
Homology
BLAST of Gchil2996.t1 vs. uniprot
Match: R7Q6E6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6E6_CHOCR)

HSP 1 Score: 116 bits (290), Expect = 1.620e-24
Identity = 137/302 (45.36%), Postives = 165/302 (54.64%), Query Frame = 0
Query:    1 MVDPMIVLGAAATAKLTGDRLVREFVEYIRR--------------NTRVREHALRTPIPLQRNRQRLSRTMKQSATTGSSSSRKRQPSRRSKRLSLLTDADLEAELENRXXXXAKERSNYSRAMPSDKLATLESELLRLRRELSRIDGSNAVSRSQPLRPVTSNVPRLSPCIPNTSLSPPSQTTHIIPTT--------PLPPSSV---TPALAAPSK---APRSGGPXXXXXXXXXMASGNVS----SSIDPERQKQEKIEXXXXXXXXXXXXXXXXXXXKLTLADIIRSAGPDPTRHLKPA 270
            MVD M +L AAA AKLTGDRLVR+FV YIR               ++  ++ + R P      R RLSR MK S    S   R+   SR SK++S +TDA+LE      XXXXAKER  YSRAM SDKLA LESEL  LRRE+ R+D            P     PR        + +PP+     +P +        P PP      TP +A P+    AP  GGP  XXXXXXX           + +DPE+Q+ EK+E XXXXXXXXXXXXXX    K+TLADIIR+AGPDP   LKPA
Sbjct:   46 MVDAMALLAAAAAAKLTGDRLVRDFVAYIRETSTSMSSTAQAYASSSTYKKRSARRP-----RRTRLSRPMKPST---SGLGRRPASSRLSKKVSTMTDAELEXXXXXXXXXXAKEREAYSRAMRSDKLAALESELDSLRREIGRLDP-----------PAPGRAPR------QPAGTPPNARWEALPRSRRPSMSHGPSPPGFAYPNTPGVAGPTAGTPAPPVGGPPPXXXXXXXXXXXXXXXXXXAEVDPEKQRLEKLERXXXXXXXXXXXXXXKK--KMTLADIIRAAGPDPASRLKPA 320          
BLAST of Gchil2996.t1 vs. uniprot
Match: A0A2V3IGH7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH7_9FLOR)

HSP 1 Score: 66.6 bits (161), Expect = 3.750e-8
Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 0
Query:    6 IVLGAAATAKLTGDRLVREFVEYIRRNTRVREHALRTPIPLQRNRQRLSRTMKQSATTGSSSSRKRQPSRR-----SKRLSLLTDADLEAELENRXXXXAKERSNYSRAMPSDKLATLESELLRLRRELSRIDGSNAVSRSQP 143
            ++L   A  KL GDR+VR+ V+ ++            P P   +  R +R  + S         +R+ +RR     S+R++ ++DADLEAEL  R    A+ER  Y++AM ++KLA LE+ELLRLR E+SR+D    +    P
Sbjct:   50 LILSHFANLKLAGDRVVRDAVQSLK------------PAPYSDSVPRPARHARPS---------RRRRARRYRHVSSRRVNAMSDADLEAELAARRAARARERERYAKAMRTEKLAVLETELLRLRSEISRMDRGTPLGGGTP 171          
The following BLAST results are available for this feature:
BLAST of Gchil2996.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7Q6E6_CHOCR1.620e-2445.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IGH7_9FLOR3.750e-835.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableCOILSCoilCoilcoord: 221..249
NoneNo IPR availableCOILSCoilCoilcoord: 272..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:807334..808632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2996.t1Gchil2996.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 807334..808632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2996.t1 ID=Gchil2996.t1|Name=Gchil2996.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=433bp
MVDPMIVLGAAATAKLTGDRLVREFVEYIRRNTRVREHALRTPIPLQRNR
QRLSRTMKQSATTGSSSSRKRQPSRRSKRLSLLTDADLEAELENRRRRRA
KERSNYSRAMPSDKLATLESELLRLRRELSRIDGSNAVSRSQPLRPVTSN
VPRLSPCIPNTSLSPPSQTTHIIPTTPLPPSSVTPALAAPSKAPRSGGPP
PPPPPPPPMASGNVSSSIDPERQKQEKIERQKRREAKKKEREEAQSKQKL
TLADIIRSAGPDPTRHLKPASKKAADEEREKYEQELKEREEREKTEEQQR
VEAEKKALLDMSKRLSPSPVQGDKGKSMEKEISTDEESSRGKEKIITLIE
DKQEQNDWSKNSGKPKDTPAKTTKQEMDKTKRDVGVSIEEKRISDSTARS
EARGSSTRVTKDEKSSGTAPSTKRTATSTKPP*
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