Gchil2985.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2985.t1
Unique NameGchil2985.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length676
Homology
BLAST of Gchil2985.t1 vs. uniprot
Match: A0A2V3INV6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INV6_9FLOR)

HSP 1 Score: 374 bits (961), Expect = 1.090e-118
Identity = 189/288 (65.62%), Postives = 227/288 (78.82%), Query Frame = 0
Query:  359 FPEMDDNEDGQDTASDNEDDG-LKSKSRIIHCQVGDFIVLDTGIGGAPRKAYVEAHLPDTDTHFVAFCDKKGGNLQIKLTPDNHKVLNEAEGKQLAKAKQDTFEDDE-------VAMLSDEPPEPKPRRVQKRKAK-PPAKPKKRGSRRVGSPEVKGQTANQDICGRCISIVWPGENLVYVALVLGYSSFSLQHQIVYMVDHCIETLNLKYREWTLLPREKEPWMDNGLVGKRLYVFWPGEYDDKDSQELAYLEFGRDTKVPYEAYVLSYVGEGKYKIIYPATEDTEI 637
             P + D+E+ +  ASD ++   +KSKSR + C VGDFI LDTGIGGAPR AY+EA+LP+  THFV+FCD++GGNLQIK+TPDNH V +EAEGK+LAK KQ    D++         +LSDE P PK RR  KR+ K   ++P KR +R   +PE+KG++ANQDICGRCISIVWPGENLVYVAL+LGYSS+S QHQ+VYM+DHCIETL+LKYREWT LPREKE WMDN LVGKRLYVFWPGEYDD+ SQ LA   FG +TKVPYEAYVLSY+ E ++K IYPATED EI
Sbjct:  235 LPYLFDDEEDEHEASDGDNHWKIKSKSRSVSCDVGDFISLDTGIGGAPRTAYIEAYLPEAGTHFVSFCDRRGGNLQIKVTPDNHHVPSEAEGKKLAKQKQREVHDEDYDKDNAAAEILSDEAPPPKTRRTPKRQGKLTSSRPAKRSNRYKRTPEIKGKSANQDICGRCISIVWPGENLVYVALILGYSSYSKQHQVVYMLDHCIETLSLKYREWTPLPREKELWMDNSLVGKRLYVFWPGEYDDEGSQVLAQKAFGDETKVPYEAYVLSYLVEQEHKTIYPATEDMEI 522          
BLAST of Gchil2985.t1 vs. uniprot
Match: R7QHG7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHG7_CHOCR)

HSP 1 Score: 369 bits (946), Expect = 2.620e-114
Identity = 259/726 (35.67%), Postives = 353/726 (48.62%), Query Frame = 0
Query:   16 TVWNQHEGRALVGHHVQITWPSDNTVYIALVVDFYPDTNQHKVLYTADESIEVLELGNGSNQRRWSHARGLESHALVGKQIILYDHGEAPGDEWFDFMRESSQNITEKFQVVVLQRLTNVIKDDVV--GPMAVGKHA---FYRVLNTKNDYLALIDLAATDYELVPPTEFEPEAXXXXXXXXXXXXXXXXVVSLLSPAPDPGXXXXXRXXXXXXXXXXXXXXXXXQEDNSD-------VEPMSTSNRRRRQLPEDPQPVLPR----------RDIHVDPXXXXXXXXXXXXIFKVAK--VVSADRIVETEVTYPSKHGVDVDIDHG----------DIIASALKGAAALE------------GSRETRDEPI-----GRSGAKTKRRAPPKPSPFPEMDDNEDG--QDTASDNEDDGLKSKSRI-----IHCQVGDFIVLDTGIGGAPRKAYVEAHLPDTDTHFVAFCDKKGGNLQIKLTPDNHKVLNEAEGKQLAKAKQDTFEDDEVAMLSDEP-----PEPKPRRVQKRK---AKPPAKPKKRGSRRVGSPEVKGQTANQDICGRCISIVWPGENLVYVALVLGYSSFSLQHQIVYMVDHCIETLNLKYREWTLLPREKEPWMDNGLVGKRLYVFWPGEYDDKDSQELAYLEFGRDTKVPYEAYVLSYVGEGKYKIIYPATEDTEIRVLRATDAENAS--PLEKEWDLLDEGVNEIDGLPIIGW 673
            T W++ +G ALVG  + + WPSD   Y ALVV F+P   +HK++Y  DES+E ++LG G  QR +  A   +   LVGK I      + P   WFDFMR+  +    KF V+V   +    + + V   P   G      FYRV+   N+YLA +DLA  DY +  P +   +                 +   L  +   G                       Q+D SD        EP+      ++ LP      + R           D+ V P                 K  VV A R V  +     K  V VDID G          ++       A  LE            G+++TRD+P+     G+   K+ R  P   S +P + ++E+G   DTASD+E  G  S+ ++        QVGD+I LD G G  PRKA+VEA+LP  D HFVAFCD KGGNL++KLT  NH VL                 DDEV +LS  P     P     R ++R+       ++PKK+   R  SP ++G +A  +ICGRC+ IVWP   LVY ALVLG++    +H +VY+ DHC+E + LKYREW LL RE EPW+  G++G RLYV W GEYD  ++ E +   F  + KV YEAYVLSY GEGKY ++YP TEDTE+R L+  + E     PLE+EW  L  G  E+ GLP++GW
Sbjct:   30 TFWSEPDGLALVGKAISVLWPSDGNYYPALVVGFHPRARKHKLIYLEDESVESVDLGIGPAQRDFRLADSPKD-PLVGKTIEFLPDAKPPAASWFDFMRDPREKSAHKFSVIVFASIDYEPQPNEVCSPPRPKGDSTPSQFYRVIYLANEYLATVDLAHVDYNIETPPQQPEDPVMEEMESRSGPGSKSALPQQLRRS---GTRSIQDDEQDGAGGDDYEPTKAEQDDVSDDADEQDEKEPVV-----KKDLPPSLSETIGRVTKAAEEAGAADVVVPPAVVGQKRADRKYRASGTKDLVVDAMRDVVMD-----KKNVSVDIDTGFDKPEPGTSVEVSPDGSPNAVPLEKTGGRAKGEGSIGTQDTRDDPLEPRSAGKKSGKSSRPVPA--SLYPPLFEDEEGGDNDTASDDEKLGWASEEKVEGAGESKSQVGDYISLDLGDGNEPRKAFVEAYLPGLDKHFVAFCDNKGGNLKVKLTRSNHTVLA----------------DDEVHVLSRTPIAKEDPGAAAGRSKRRRNVLTLSDSRPKKKLEAR--SPPIRGDSAGPEICGRCLKIVWPESELVYTALVLGFNPEKNEHLVVYLSDHCVEVVQLKYREWNLLSREDEPWIAQGMLGNRLYVLWNGEYDSAEANEKSKEIFDGECKVVYEAYVLSYEGEGKYLLLYPNTEDTEVRTLQMDEKERGDQKPLEREWGPLGAGATEVAGLPVVGW 721          
The following BLAST results are available for this feature:
BLAST of Gchil2985.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3INV6_9FLOR1.090e-11865.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QHG7_CHOCR2.620e-11435.67Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..192
NoneNo IPR availablePANTHERPTHR12663:SF3TRANSCRIPTIONAL REGULATORcoord: 7..75
coord: 328..568
IPR039776Sister chromatid cohesion protein Pds5PANTHERPTHR12663ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATEDcoord: 7..75
coord: 328..568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:693343..695370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2985.t1Gchil2985.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 693343..695370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2985.t1 ID=Gchil2985.t1|Name=Gchil2985.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=676bp
MGTARKSSRRDRSKRTVWNQHEGRALVGHHVQITWPSDNTVYIALVVDFY
PDTNQHKVLYTADESIEVLELGNGSNQRRWSHARGLESHALVGKQIILYD
HGEAPGDEWFDFMRESSQNITEKFQVVVLQRLTNVIKDDVVGPMAVGKHA
FYRVLNTKNDYLALIDLAATDYELVPPTEFEPEAEAEAEAEPGTEPGTEP
VVSLLSPAPDPGDDDDGREGDEKNEEEYDPDKDLDQEDNSDVEPMSTSNR
RRRQLPEDPQPVLPRRDIHVDPDPDPIDEDMDIDIFKVAKVVSADRIVET
EVTYPSKHGVDVDIDHGDIIASALKGAAALEGSRETRDEPIGRSGAKTKR
RAPPKPSPFPEMDDNEDGQDTASDNEDDGLKSKSRIIHCQVGDFIVLDTG
IGGAPRKAYVEAHLPDTDTHFVAFCDKKGGNLQIKLTPDNHKVLNEAEGK
QLAKAKQDTFEDDEVAMLSDEPPEPKPRRVQKRKAKPPAKPKKRGSRRVG
SPEVKGQTANQDICGRCISIVWPGENLVYVALVLGYSSFSLQHQIVYMVD
HCIETLNLKYREWTLLPREKEPWMDNGLVGKRLYVFWPGEYDDKDSQELA
YLEFGRDTKVPYEAYVLSYVGEGKYKIIYPATEDTEIRVLRATDAENASP
LEKEWDLLDEGVNEIDGLPIIGWTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039776Pds5