Gchil2927.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2927.t1
Unique NameGchil2927.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length183
Homology
BLAST of Gchil2927.t1 vs. uniprot
Match: A0A2V3IQY4_9FLOR (50S ribosomal protein L5, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQY4_9FLOR)

HSP 1 Score: 336 bits (861), Expect = 3.080e-116
Identity = 167/182 (91.76%), Postives = 175/182 (96.15%), Query Frame = 0
Query:    1 MVSGQKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL 182
            MVSGQ+NAANPMRELKVHKLVLNICVGESGDRLTRA RVLEQLTGQQPVYSKSRLTIRTFGIRRNEKI+THVTIRGPKA+EILERALKVKEYELR+ NFS GG + R AGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAP RIGKLQTV+K+DAIKWFQTKHEGIV+
Sbjct:    1 MVSGQRNAANPMRELKVHKLVLNICVGESGDRLTRAGRVLEQLTGQQPVYSKSRLTIRTFGIRRNEKIATHVTIRGPKAEEILERALKVKEYELRDGNFSSGGNSARGAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPARIGKLQTVTKEDAIKWFQTKHEGIVV 182          
BLAST of Gchil2927.t1 vs. uniprot
Match: R7QN89_CHOCR (50S ribosomal protein L5, chloroplastic n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN89_CHOCR)

HSP 1 Score: 286 bits (731), Expect = 2.140e-96
Identity = 143/179 (79.89%), Postives = 156/179 (87.15%), Query Frame = 0
Query:    4 GQKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL 182
             +KN+AN MRELKVHKLVLNICVGESGDRLTRA RVLEQLTGQ PV+SKSRLTIRTFGIRRNEKI+THVT+RGPKA+EILER LKVKE+EL+E NFS GG            INEHIDLGLKYDPTTGIYGMD Y+VLKRAG+RVSKRRRAP  IGK QTVSKDDAIKWFQTK++G+VL
Sbjct:    6 AKKNSANVMRELKVHKLVLNICVGESGDRLTRAGRVLEQLTGQTPVFSKSRLTIRTFGIRRNEKIATHVTVRGPKAEEILERGLKVKEFELKERNFSGGGXXXXXXXXXXXXINEHIDLGLKYDPTTGIYGMDFYIVLKRAGNRVSKRRRAPSSIGKFQTVSKDDAIKWFQTKYDGLVL 184          
BLAST of Gchil2927.t1 vs. uniprot
Match: A0A5J4Z700_PORPP (50S ribosomal protein L5, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z700_PORPP)

HSP 1 Score: 280 bits (717), Expect = 2.210e-94
Identity = 143/181 (79.01%), Postives = 156/181 (86.19%), Query Frame = 0
Query:    1 MVSGQKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIV 181
            MV+G KN +NPMRELKVHKLVLN CVGESGDRLTRAARVLEQLTGQQPV+SKSRLTIRTFGIRRNEKIS HVT+RG KADEILER LKVKEYEL+  NFSD G+       FGFGI EHIDLG+KYDP+TGIYGMD YVVLKRAG RV++RRRA  R+GK Q VSKDDAIKWF  K+EGI+
Sbjct:    1 MVAGGKNPSNPMRELKVHKLVLNCCVGESGDRLTRAARVLEQLTGQQPVFSKSRLTIRTFGIRRNEKISAHVTVRGDKADEILERGLKVKEYELKAGNFSDTGS-------FGFGITEHIDLGIKYDPSTGIYGMDFYVVLKRAGARVAQRRRAKGRVGKNQKVSKDDAIKWFVDKYEGII 174          
BLAST of Gchil2927.t1 vs. uniprot
Match: A0A7S1TEB6_9RHOD (50S ribosomal protein L5, chloroplastic n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEB6_9RHOD)

HSP 1 Score: 275 bits (703), Expect = 2.150e-91
Identity = 141/182 (77.47%), Postives = 153/182 (84.07%), Query Frame = 0
Query:    1 MVSGQKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL 182
            M SG+ N  N MRELKVHKLVLN CVGE GDRLTRA RVLEQLTGQ PV+SKSRLTIRTFGIRRN+KI+T VT+RG KA+EILER LKVKE+ELR  NFSD        G FGFGINEHIDLG+KYDPTTGIYGMD YVVLKRAG R++KRRRA  RIGK QTVSK+DAIKWFQ K+EGIVL
Sbjct:   59 MGSGKNNLGNKMRELKVHKLVLNCCVGEPGDRLTRAGRVLEQLTGQTPVFSKSRLTIRTFGIRRNDKIATSVTVRGHKAEEILERGLKVKEFELRNRNFSD-------TGNFGFGINEHIDLGIKYDPTTGIYGMDFYVVLKRAGSRIAKRRRAKGRIGKYQTVSKEDAIKWFQQKYEGIVL 233          
BLAST of Gchil2927.t1 vs. uniprot
Match: A0A7S0ZK70_9RHOD (50S ribosomal protein L5, chloroplastic (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK70_9RHOD)

HSP 1 Score: 270 bits (691), Expect = 2.020e-90
Identity = 137/176 (77.84%), Postives = 151/176 (85.80%), Query Frame = 0
Query:    1 MVSGQKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTK 176
            MVSG+KN  NPMRELKV KLVLN CVGESGDRLTRA+RVLEQLTGQQP++SKSRLTIRTFGIRRNEKISTHVT+RG KA+EILER LKVKEYEL   NFSD G+       FGFGINEHIDLG+KYDP+TGIYGMD YVVLKR G RVS+R+R   R+GK Q+VSK+DAIKWFQ K
Sbjct:    8 MVSGKKNLGNPMRELKVDKLVLNCCVGESGDRLTRASRVLEQLTGQQPIFSKSRLTIRTFGIRRNEKISTHVTVRGDKAEEILERGLKVKEYELYGRNFSDTGS-------FGFGINEHIDLGIKYDPSTGIYGMDFYVVLKRPGARVSRRKRCKSRVGKYQSVSKEDAIKWFQQK 176          
BLAST of Gchil2927.t1 vs. uniprot
Match: A0A1X6NJA3_PORUM (50S ribosomal protein L5, chloroplastic n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJA3_PORUM)

HSP 1 Score: 268 bits (685), Expect = 1.140e-89
Identity = 134/171 (78.36%), Postives = 150/171 (87.72%), Query Frame = 0
Query:   12 MRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL 182
            MRELKVHKLVLN CVGESGDRLTRAARVLEQLTGQ PV+SKSRLTIRTFG+RRNEKISTHVT+RG KA+EILER LKVKEYEL+  NFS+        G FGFGINEHIDLGLKYDPTTGIYGMD Y+VLKRAG RV+KRRR    IGK+Q+VSKDD++KWFQ+K++GI+L
Sbjct:    1 MRELKVHKLVLNCCVGESGDRLTRAARVLEQLTGQTPVFSKSRLTIRTFGVRRNEKISTHVTVRGDKAEEILERGLKVKEYELQSRNFSN-------TGNFGFGINEHIDLGLKYDPTTGIYGMDFYIVLKRAGTRVAKRRRCKSTIGKVQSVSKDDSMKWFQSKYDGIIL 164          
BLAST of Gchil2927.t1 vs. uniprot
Match: A0A3P6TQ52_LITSI (Uncharacterized protein n=1 Tax=Litomosoides sigmodontis TaxID=42156 RepID=A0A3P6TQ52_LITSI)

HSP 1 Score: 252 bits (644), Expect = 6.970e-82
Identity = 124/178 (69.66%), Postives = 145/178 (81.46%), Query Frame = 0
Query:    5 QKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL 182
            +K AANPMRELK+ KL LNICVGESGDRLTRAA+VLEQLTGQ PV+SK+R T+R+FGIRRNEKI+ H T+RGPKA+EI+ER LKVKEYEL   NFSD        G FGFGI EHIDLG+KYDP  GIYGMD YVVL RAG RV+KRRRA  R+G+   V K++A+KWFQ K++GI+L
Sbjct:   89 EKKAANPMRELKIEKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGPKAEEIIERGLKVKEYELYRENFSD-------TGNFGFGIQEHIDLGIKYDPLIGIYGMDFYVVLGRAGHRVAKRRRARGRVGRTHRVGKEEAVKWFQQKYDGIIL 259          
BLAST of Gchil2927.t1 vs. uniprot
Match: A0A0B2V082_TOXCA (60S ribosomal protein L11 n=20 Tax=Spirurina TaxID=6274 RepID=A0A0B2V082_TOXCA)

HSP 1 Score: 249 bits (635), Expect = 1.740e-81
Identity = 122/178 (68.54%), Postives = 146/178 (82.02%), Query Frame = 0
Query:    5 QKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL 182
            +K AANPMRELK+ KL LNICVGESGDRLTRAA+VLEQLTGQ PV+SK+R T+R+FGIRRNEKI+ H T+RGPKA+EI+ER LKVKEYEL   NFS+       +G FGFGI EHIDLG+KYDP+ GIYGMD YVVL RAG RV+KRRRA  R+G    V K++++KWFQ K++GI+L
Sbjct:   21 EKKAANPMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGPKAEEIIERGLKVKEYELYRENFSN-------SGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVLDRAGRRVAKRRRARGRVGHSHRVEKEESVKWFQQKYDGIIL 191          
BLAST of Gchil2927.t1 vs. uniprot
Match: RL112_CAEEL (60S ribosomal protein L11-2 n=13 Tax=cellular organisms TaxID=131567 RepID=RL112_CAEEL)

HSP 1 Score: 248 bits (634), Expect = 1.890e-81
Identity = 121/178 (67.98%), Postives = 145/178 (81.46%), Query Frame = 0
Query:    5 QKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL 182
            +K A N MRELK+ KL LNICVGESGDRLTRAA+VLEQLTGQ PV+SK+R T+RTFGIRRNEKI+ H T+RGPKA+EILE+ LKVKEYEL + NFSD        G FGFG+ EHIDLG+KYDP+ GIYGMD YVVL RAG R++KRRRAP R+G    V ++++IKWFQ K++GI+L
Sbjct:   12 EKKARNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNEKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSD-------TGNFGFGVQEHIDLGIKYDPSIGIYGMDFYVVLDRAGRRIAKRRRAPGRVGPSHRVEREESIKWFQQKYDGIIL 182          
BLAST of Gchil2927.t1 vs. uniprot
Match: RL11_NEUCR (60S ribosomal protein L11 n=13 Tax=Sordariomycetes TaxID=147550 RepID=RL11_NEUCR)

HSP 1 Score: 246 bits (629), Expect = 5.200e-81
Identity = 119/180 (66.11%), Postives = 146/180 (81.11%), Query Frame = 0
Query:    2 VSGQKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVYSKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFSDGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSKRRRAPQRIGKLQTVSKDDAIKWFQTKHEGIV 181
            +S ++ A NPMREL++ KLVLNICVGESGDRLTRAA+VLEQL+GQ PVYSK+R T+RTFGIRRNEKIS HVT+RGPKA+EILER LKVKEYELR+ NFS+        G FGFGI+EHIDLG+KYDP  GIYGMD Y  + R G+RVS+RRRA  R+G    +++DD +KWF+++ + IV
Sbjct:    1 MSTEQKAQNPMRELRIQKLVLNICVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKISVHVTVRGPKAEEILERGLKVKEYELRKRNFSE-------TGNFGFGISEHIDLGIKYDPGIGIYGMDFYCCMTRPGERVSRRRRAKSRVGATHRITRDDTVKWFKSRFDAIV 173          
The following BLAST results are available for this feature:
BLAST of Gchil2927.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQY4_9FLOR3.080e-11691.7650S ribosomal protein L5, chloroplastic n=1 Tax=Gr... [more]
R7QN89_CHOCR2.140e-9679.8950S ribosomal protein L5, chloroplastic n=1 Tax=Ch... [more]
A0A5J4Z700_PORPP2.210e-9479.0150S ribosomal protein L5, chloroplastic n=1 Tax=Po... [more]
A0A7S1TEB6_9RHOD2.150e-9177.4750S ribosomal protein L5, chloroplastic n=1 Tax=Co... [more]
A0A7S0ZK70_9RHOD2.020e-9077.8450S ribosomal protein L5, chloroplastic (Fragment)... [more]
A0A1X6NJA3_PORUM1.140e-8978.3650S ribosomal protein L5, chloroplastic n=1 Tax=Po... [more]
A0A3P6TQ52_LITSI6.970e-8269.66Uncharacterized protein n=1 Tax=Litomosoides sigmo... [more]
A0A0B2V082_TOXCA1.740e-8168.5460S ribosomal protein L11 n=20 Tax=Spirurina TaxID... [more]
RL112_CAEEL1.890e-8167.9860S ribosomal protein L11-2 n=13 Tax=cellular orga... [more]
RL11_NEUCR5.200e-8166.1160S ribosomal protein L11 n=13 Tax=Sordariomycetes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 67..171
e-value: 6.6E-17
score: 61.5
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 1..179
e-value: 8.4E-39
score: 130.9
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 6..182
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 10..63
e-value: 2.7E-20
score: 72.4
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..182
e-value: 8.5E-63
score: 213.1
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 10..181
NoneNo IPR availablePANTHERPTHR11994:SF1760S RIBOSOMAL PROTEIN L11-1coord: 6..182
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 40..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:315362..315910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2927.t1Gchil2927.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 315362..315910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2927.t1 ID=Gchil2927.t1|Name=Gchil2927.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=183bp
MVSGQKNAANPMRELKVHKLVLNICVGESGDRLTRAARVLEQLTGQQPVY
SKSRLTIRTFGIRRNEKISTHVTIRGPKADEILERALKVKEYELRESNFS
DGGAATRAAGGFGFGINEHIDLGLKYDPTTGIYGMDVYVVLKRAGDRVSK
RRRAPQRIGKLQTVSKDDAIKWFQTKHEGIVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031309Ribosomal_L5_C
IPR002132Ribosomal_L5
IPR031310Ribosomal_L5_N
IPR022803Ribosomal_L5_dom_sf
IPR020929Ribosomal_L5_CS