Gchil2904.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2904.t1
Unique Name	Gchil2904.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	424

Homology

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BLAST of Gchil2904.t1 vs. uniprot
Match: A0A2V3IFL7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFL7_9FLOR)

HSP 1 Score: 572 bits (1475), Expect = 8.750e-202
Identity = 296/427 (69.32%), Postives = 343/427 (80.33%), Query Frame = 0

Query:    1 MVRPTRYRRHRIPVGSRKCYDRFATGWTEFAKEAVNLRFQGT--VPLIKVEDPDISPGLSYATPKQTTEVIENHDMETNENSSLALSVMLYNTNEEWKEGDLVDVRTCATGIDRLTRVQVTRQLLMVYNEDLQSIAKGYTRTITDNK-GYCYKRGQRNSIFVACHSALISEGMVVCCRCVYNSLERNVSVNEMDVRTQIALKSVITKRSWYSNKDTVIRTSLLYILFFLSTVASSVLIHVGQYEVAVSVLISGLTSWYYLLTWVAGN-DTGVTYALTFRGSAECVRSHINMSLGNHGKPIMDPGSQGKHDHLVGTYIVQDKKIEKSIIRFVSAAMCTAKMREVIKPANSCALGSNMGEKTVWDIVMTSKRIRSLGCLLTNKFYVVHTASGLKAFEVTSVSTTARHTNWKEIGEEMVGIIELNHVILG 423
            M R  R R+ RI  GSRKCYDRFA GWTE+AKEAVN++ +G   VPLIKVEDPDISPGLSYATPKQ  EV   H M+T+E SS+AL++ LYN  EEW EGD VDVR C TG   LT+V+VTR+LLM YN DLQSI K  TR ITD+  GYCYKR QRNSIFVACHS +I+EGMVVCCRC YNSL++NV  NEMDVRTQ ALKSVI  ++WY ++ +++RTS LY++F LS + SSVLIHV +YEVAVSVLI+GLT WY +L +VAG  D  VT+ALTFRGS ECV SHINMSLG  G+PI DPG Q KH+HLV TY+V+DKK EKSI+RFVSA M T KMREV++P NSCALGSN+ EKT+WDIVMT +RIR   CLLTN FYVVHTASGLKAFEV+S STTAR+T WKEI EE VG+ E +HVILG
Sbjct:    1 MGRSMRDRQVRILSGSRKCYDRFAAGWTEYAKEAVNMKLRGNAPVPLIKVEDPDISPGLSYATPKQILEVFGTHGMDTDEESSIALAIKLYNAKEEWNEGDDVDVRMCGTGPQWLTKVRVTRKLLMAYNADLQSIEKFATRVITDDTHGYCYKREQRNSIFVACHSVVITEGMVVCCRCAYNSLKKNVHSNEMDVRTQRALKSVIISQNWYYDRSSILRTSTLYLIFTLSIITSSVLIHVEKYEVAVSVLIAGLTLWYDMLPYVAGKGDMSVTFALTFRGSEECVGSHINMSLGKQGRPITDPGPQRKHNHLVRTYVVKDKKTEKSILRFVSATMYTTKMREVLRPTNSCALGSNVDEKTLWDIVMTIRRIRRRVCLLTNNFYVVHTASGLKAFEVSSASTTARYTTWKEITEERVGVNERDHVILG 427

The following BLAST results are available for this feature:

BLAST of Gchil2904.t1 vs. uniprot

BLAST of Gchil2904.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IFL7_9FLOR	8.750e-202	69.32	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..213
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 242..262
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 263..423
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 214..236
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 237..241
None	No IPR available	TMHMM	TMhelix		coord: 218..237
None	No IPR available	TMHMM	TMhelix		coord: 242..264

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000106_pilon	contig	tig00000106_pilon:115908..117179 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2904.t1	Gchil2904.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000106_pilon 115908..117179 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2904.t1 ID=Gchil2904.t1|Name=Gchil2904.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=424bp
MVRPTRYRRHRIPVGSRKCYDRFATGWTEFAKEAVNLRFQGTVPLIKVED
PDISPGLSYATPKQTTEVIENHDMETNENSSLALSVMLYNTNEEWKEGDL
VDVRTCATGIDRLTRVQVTRQLLMVYNEDLQSIAKGYTRTITDNKGYCYK
RGQRNSIFVACHSALISEGMVVCCRCVYNSLERNVSVNEMDVRTQIALKS
VITKRSWYSNKDTVIRTSLLYILFFLSTVASSVLIHVGQYEVAVSVLISG
LTSWYYLLTWVAGNDTGVTYALTFRGSAECVRSHINMSLGNHGKPIMDPG
SQGKHDHLVGTYIVQDKKIEKSIIRFVSAAMCTAKMREVIKPANSCALGS
NMGEKTVWDIVMTSKRIRSLGCLLTNKFYVVHTASGLKAFEVTSVSTTAR
HTNWKEIGEEMVGIIELNHVILG*