Gchil2881.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2881.t1
Unique NameGchil2881.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1075
Homology
BLAST of Gchil2881.t1 vs. uniprot
Match: A0A2V3IHK8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHK8_9FLOR)

HSP 1 Score: 1213 bits (3138), Expect = 0.000e+0
Identity = 660/1082 (61.00%), Postives = 813/1082 (75.14%), Query Frame = 0
Query:    1 MRLSAAASLRVRHALRASCGGLCIAILSLATSIIPGCLTSVIFFICVIAGTPENLQGFQLRCASLTYLGALLGICAYAIVHLVASTSSIATFFLCIPFIVFFAALRTDANLTPLPPVANVLFGFLTISRFPTSISTLENVLPNALIDVTVGWFLANFVNLFFADRASDSGRRIVAEELRKLGMHISSIASKTFSHTPLLH------HSTSDTPSHHLSLLIDPQPTQSSSALLNQEHFLFETEHAPRLTQNHPQIDRTEQMRAAAHASLNFFKQLPPLGRTRVDNFSNLAAAARYFEASAFEPCLITPKISRWRNASAWKQLVDDLQALVAKVASLESVVWGTRGHRRFSSAQIASLFGEAYFPLWVAHYAACSAACAVMSNXXXXXXXTEMFHLDDDCTNSHSLHPDIDPRKWKTRRAEMYSGFLSKYRLRIHMLSSRYFPSHSTVADFRTAHRNN----AGRLPFFSQDDTFSRKAIHSSASGAGGADSSYESEDEAMILNQQPAKRDTSHLTLSEMQALSFFGITSHAMSEEIAHVQKALVTLAAKTEARGVFAPFRFLISSFPILFERVKQLFRWDVCAWEVRFIFTHSVLLLVILALALFLPIPDKFEASEIAWAFSSAALAAQLSAEPTLFIGTIRVVATIAGGLQAFGFNSFLNAIGRKEHFGLNYLIIPYVVIAILLSLLIVPPKFRYAAFLNIVTNFVLLFCPRATDECNHVSSPPTPQCYPDWEYAVSRAVNVSIGVVFALAFHLLFWPRFANEVALRTLSKALISAVRLMGKLRRTYFSFGQERSNSPSATRG-RRSTVGNDFGRRLMEVGDIYRREEMIMEEIQHRLSDLVSHAALKVKLEAGVWEKGPLRLSPLLPHLLNDFIALDVSMKEMASLLGRSPIFSESYGRSVYRHFILPLLPLYETIHISLNNLVGLAERGLTEKKTEGTRLRELAFDLHQGITHVARIRSKLRSRAANRLQCFERNRDKTLALSSERTHFSEERGRRYSWSDSPNSSKLQMKPVHHRASTDGNGIEVKDVQGRLCVDDLVLYNAYSFIADGCLSAFVRIAAAILADIESKVELAHAKKQK 1071
            M LS    LR+RHALRA+ GG  IA+LSLAT+I  GCL SV+FFI VIA TPENLQGFQLR ASLT+LGA+LGI AY++VHL+ASTS+I TFF  IPFIVFF+ALR + +LTPLPPVANVL G LTIS+FP+SIS L+ V+P ALIDVT  + +AN VNL FADRASD+GRRIVA ELR LG HIS IA++TFS  P  H      HSTSD    HL+L +D     + S+L +++H+LF T+HA   + +H  ++RTE M+A AHASL++ KQLPPL RTRV+NFSNLA AAR+F AS FEPCLI P ISRWRNAS WK+LV+DLQ L++KVASLESV   T    RF + Q+  LFGEA+FPLWVAHYAACSAACA MS         +MFHLDD   +   LHP+IDPRKWK RRAEMYSGFL +YR R+  +++R   SH++VADFR     +    +GR         ++R++  S       +DS Y+S     +   Q  +   S L++++ QALSFFGITSHA+SEEI HVQ ++V LA+ T+ARG+FAPF F++SS P+L +RVK L R DV AWEVRF+FTHS LLLVILALALFLP+ D FEASEIAW F+SAALAAQLSAEPTLFIG IRVVAT+ GG+ AFGFNS L+A+GRKEH  LNY+I+PYV +  ++SL+++P KFRYA+FLNIVTN VLLFCPRAT+ECN V    T QC+PDW+YA+SRA NVSIGVVFAL FHLLFWPRFAN+VALRTLS+A +++VRL+GKLRRTYFS+G + +         RR  V +   R ++  GD+YRR+E +M+EIQ RLSD +S AAL VKLEAGVW+ GPLRLSPLLP LLNDFIAL+VS+KEMASLLGR PIFS SYG SVYRHFI PLLP+YETI +S +NL GL ERG+ E+K     L+EL FDLHQ ITH+AR+RS+LRSRAA RL+ FE +  +++ LS+E++ F E   RR+SWS+S    + ++     R STDGN I  + V   LC+DD+VLY+A+ FIAD CLSAFVRIAA +L D E+K+E    K +K
Sbjct:    1 MPLSDTTLLRLRHALRAASGGSIIALLSLATNISAGCLPSVVFFISVIAATPENLQGFQLRSASLTFLGAVLGITAYSLVHLIASTSAIGTFFAAIPFIVFFSALRPNPHLTPLPPVANVLLGLLTISQFPSSISALKQVVPAALIDVTFAYIVANVVNLAFADRASDAGRRIVARELRNLGAHISRIATQTFSQ-PQQHPQHNSFHSTSD----HLTLFMDRGHRDTLSSL-HEQHYLFRTKHASHASHHH--LERTELMQAEAHASLHYLKQLPPLSRTRVENFSNLAIAARFFSASTFEPCLIRPTISRWRNASTWKKLVNDLQVLMSKVASLESVAMQTESRPRFYAEQLCELFGEAFFPLWVAHYAACSAACASMSTAMYHATCRDMFHLDDTVHDGFLLHPNIDPRKWKNRRAEMYSGFLMRYRHRMTAVAAREIHSHASVADFRNVEGRSTWSTSGRQHHGGTTQQYARQS-RSVEKDITSSDSEYDS-----LFTTQQKRPSGSKLSMAQRQALSFFGITSHALSEEIGHVQLSMVELASSTDARGLFAPFYFVVSSIPLLVKRVKDLVRGDVQAWEVRFVFTHSTLLLVILALALFLPLRDTFEASEIAWVFTSAALAAQLSAEPTLFIGAIRVVATVTGGVLAFGFNSLLDALGRKEHDELNYIIVPYVFVTTVVSLMVLPTKFRYASFLNIVTNTVLLFCPRATEECNQVLGQQTTQCFPDWQYAISRAANVSIGVVFALVFHLLFWPRFANQVALRTLSEAFVNSVRLLGKLRRTYFSYGLQTARLRLRKGSIRRPVVASSVKRVILNEGDLYRRDESVMKEIQCRLSDRISFAALTVKLEAGVWKTGPLRLSPLLPRLLNDFIALEVSLKEMASLLGRCPIFSGSYGPSVYRHFIRPLLPIYETIQVSCSNLAGLVERGMVERKASERYLKELVFDLHQAITHLARVRSQLRSRAARRLERFEFSMSESMRLSAEQSFFLESEERRFSWSESLIEPERRLVTSPERISTDGNRILGRHVPKELCIDDIVLYSAFCFIADVCLSAFVRIAAELLVDSETKIEELRGKTRK 1068          
BLAST of Gchil2881.t1 vs. uniprot
Match: R7QMX1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX1_CHOCR)

HSP 1 Score: 514 bits (1323), Expect = 1.890e-166
Identity = 285/571 (49.91%), Postives = 386/571 (67.60%), Query Frame = 0
Query:  508 EMQALSFFGITSHAMSEEIAHVQKALVTLAAKTEARGVFAPFRFLISSFPILFERVKQLFRWDVCAWEVRFIFTHSVLLLVILALALFLPIPDKFEASEIAWAFSSAALAAQLSAEPTLFIGTIRVVATIAGGLQAFGFNSFLNAIGRKEHFGLNYLIIPYVVIAILLSLLIVPPKFRYAAFLNIVTNFVLLFCPRATDECNHVSSPPTPQCYPDWEYAVSRAVNVSIGVVFALAFHLLFWPRFANEVALRTLSKALISAVRLMGKLRRTYFSFG-QERSNSPSATRGRRSTVGNDFGRRLMEVGDIYRREEMIMEEIQHRLSDLVSHAALKVKLEAGVWEKGPLRLSPLLPHLLNDFIALDVSMKEMASLLGRSPIFSESYGRSVYRHFILPLLPLYETIHISLNNLVGLAERGLTEKKTEGTRLRELAFDLHQGITHVARIRSKLRSRAANRLQCFERNRDKTLALSSERTHFSEERGRRYS-------WSDSPNSSKLQMKPVHHRASTDGNGIEVKDVQGRLCVDDLVLYNAYSFIADGCLSAFVRIAAAILADIESKVELAHAKKQ 1070
            E+QALS+F +TSHA+SEEI+HVQ+A+V LAA ++ARG+ APF F++S  P L+ R+K L + +V  WE++F  THS+LL  ILAL+LFLPI  + E SEIAW ++SAALAAQLSAEPTLFIGTIRV+ATI G    FGF S L+A+GR +H  + YL IPY+ I  ++ LL+VPP +RYAAFL I TN +++FCPR+T EC  V    +  C+PDW+YA+SR+ NV++GVVFA+ FHL+FWPR+AN+VALR LS A +S+ RL GKL RTYFS+G    S SP          G+     L+   D+Y++++ +++EI  ++   ++ A L VK EA VW+ GP RL PL+P +L+DF+AL VS+ EMASLLGR PI+S SYGRSV+ HFI P+L +YETI ISLNNLVG+ +R +   K + TR  E +FDLH  ITH+ARIR KLR  AA R   FE  +   + L+  +       G           + D   + + +        S +      K  + RLCVDD+VLY+A++FI D CLSAFVRIA A+L D E+ ++    ++Q
Sbjct:   60 EVQALSYFALTSHALSEEISHVQQAMVELAATSDARGLLAPFYFVVSGLPPLWRRIKALAKGNVRGWEIKFACTHSMLLTSILALSLFLPI-SRIEESEIAWVYTSAALAAQLSAEPTLFIGTIRVLATITGAGIGFGFTSILDAMGRSDHSAIQYLAIPYMFIMTIVCLLLVPPAYRYAAFLVIATNAIIIFCPRSTPECTRVLEKQSESCFPDWKYALSRSTNVALGVVFAMFFHLIFWPRYANQVALRYLSAAFLSSSRLFGKLHRTYFSYGLPSGSGSPDLEPSTSYARGD-----LLLNEDVYQKDQSVLDEIISKVGCPLADAMLLVKSEADVWQAGPFRLDPLIPRVLSDFVALSVSLVEMASLLGRRPIYSSSYGRSVFEHFIHPMLGVYETIQISLNNLVGITDRTVAGNKEQETR--ENSFDLHHAITHLARIRGKLRRDAAKR--SFEFQKFSAIQLTRRKPCRFSRHGNAADDSYVDLVFQDLGLAKQTRDASYPRARSHNETNRACKTDEQRLCVDDVVLYDAFTFITDTCLSAFVRIAVAVLIDSEANLKRMKERRQ 620          
The following BLAST results are available for this feature:
BLAST of Gchil2881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHK8_9FLOR0.000e+061.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMX1_CHOCR1.890e-16649.91Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 681..685
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 578..598
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 686..705
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 706..725
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 163..577
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 599..625
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 626..649
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 650..660
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 749..1074
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 661..680
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 726..748
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..139
NoneNo IPR availableTMHMMTMhelixcoord: 628..650
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 659..681
NoneNo IPR availableTMHMMTMhelixcoord: 576..598
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 726..748
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:1054184..1057408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2881.t1Gchil2881.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 1054184..1057408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2881.t1 ID=Gchil2881.t1|Name=Gchil2881.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1075bp
MRLSAAASLRVRHALRASCGGLCIAILSLATSIIPGCLTSVIFFICVIAG
TPENLQGFQLRCASLTYLGALLGICAYAIVHLVASTSSIATFFLCIPFIV
FFAALRTDANLTPLPPVANVLFGFLTISRFPTSISTLENVLPNALIDVTV
GWFLANFVNLFFADRASDSGRRIVAEELRKLGMHISSIASKTFSHTPLLH
HSTSDTPSHHLSLLIDPQPTQSSSALLNQEHFLFETEHAPRLTQNHPQID
RTEQMRAAAHASLNFFKQLPPLGRTRVDNFSNLAAAARYFEASAFEPCLI
TPKISRWRNASAWKQLVDDLQALVAKVASLESVVWGTRGHRRFSSAQIAS
LFGEAYFPLWVAHYAACSAACAVMSNAMCNATCTEMFHLDDDCTNSHSLH
PDIDPRKWKTRRAEMYSGFLSKYRLRIHMLSSRYFPSHSTVADFRTAHRN
NAGRLPFFSQDDTFSRKAIHSSASGAGGADSSYESEDEAMILNQQPAKRD
TSHLTLSEMQALSFFGITSHAMSEEIAHVQKALVTLAAKTEARGVFAPFR
FLISSFPILFERVKQLFRWDVCAWEVRFIFTHSVLLLVILALALFLPIPD
KFEASEIAWAFSSAALAAQLSAEPTLFIGTIRVVATIAGGLQAFGFNSFL
NAIGRKEHFGLNYLIIPYVVIAILLSLLIVPPKFRYAAFLNIVTNFVLLF
CPRATDECNHVSSPPTPQCYPDWEYAVSRAVNVSIGVVFALAFHLLFWPR
FANEVALRTLSKALISAVRLMGKLRRTYFSFGQERSNSPSATRGRRSTVG
NDFGRRLMEVGDIYRREEMIMEEIQHRLSDLVSHAALKVKLEAGVWEKGP
LRLSPLLPHLLNDFIALDVSMKEMASLLGRSPIFSESYGRSVYRHFILPL
LPLYETIHISLNNLVGLAERGLTEKKTEGTRLRELAFDLHQGITHVARIR
SKLRSRAANRLQCFERNRDKTLALSSERTHFSEERGRRYSWSDSPNSSKL
QMKPVHHRASTDGNGIEVKDVQGRLCVDDLVLYNAYSFIADGCLSAFVRI
AAAILADIESKVELAHAKKQKKND*
back to top