Gchil2880.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2880.t1
Unique NameGchil2880.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length149
Homology
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BLAST of Gchil2880.t1 vs. uniprot
Match: A0A2V3IK96_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK96_9FLOR)

HSP 1 Score: 117 bits (294), Expect = 3.300e-31
Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 0 
Query:    3 LVTRALSSFLTFAFAAAAISKLYPNHPNYEHMSEKAPSWLAALHLQRILTADQLQMAIALIELSCALLLPFTKAANYGLILVMLGAIYTHYSIDGA-LTKEAAPASFLLALLCLLLVFRNAQQPLREQAA 131
            ++T+ L   +TFAF AA +SKLY  HP Y  M  K+ +WLAAL LQ  +  +QL + I + E+   LL+PF +AAN  LI VML AIYTH+ +DG  +TKEAAPA+FLLALL LL V R +++  +++ A
Sbjct:    1 MITKVLGYLMTFAFVAAGMSKLYERHPMYAEMHAKSDAWLAALGLQPFMNGEQLCIVIGVTEVVAGLLVPFFRAANAVLIAVMLAAIYTHFRMDGGRITKEAAPAAFLLALLMLLAVLRRSEKVAQQRLA 130
The following BLAST results are available for this feature:
BLAST of Gchil2880.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK96_9FLOR3.300e-3150.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032808DoxX familyPFAMPF13564DoxX_2coord: 8..112
e-value: 2.0E-7
score: 31.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..148
NoneNo IPR availableTMHMMTMhelixcoord: 102..119
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:1053329..1053775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2880.t1Gchil2880.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 1053329..1053775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2880.t1 ID=Gchil2880.t1|Name=Gchil2880.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=149bp
MALVTRALSSFLTFAFAAAAISKLYPNHPNYEHMSEKAPSWLAALHLQRI
LTADQLQMAIALIELSCALLLPFTKAANYGLILVMLGAIYTHYSIDGALT
KEAAPASFLLALLCLLLVFRNAQQPLREQAAHHSQTAATHVREGHKED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032808DoxX