Gchil2596.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2596.t1
Unique NameGchil2596.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length287
Homology
BLAST of Gchil2596.t1 vs. uniprot
Match: A0A2V3IJM5_9FLOR (Phosphatidylinositol transfer protein CSR1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJM5_9FLOR)

HSP 1 Score: 372 bits (955), Expect = 3.620e-127
Identity = 178/287 (62.02%), Postives = 219/287 (76.31%), Query Frame = 0
Query:    1 MASYFSGFRTC-RIVEDAPLEALPESEASALTALQARTKHTFSSPHNNLHPEDPWRTLTQNQVDLLLLRFLRYNLLQVESSFTHVCKVAAWRTDECPWNFGLELLQNRKAGVPILSDVIRGRDDEVLLFIPCRHYDKSIIDRKLQTTAIKAFFESYLYATGGLKASSAVMLVDFSGLHLKQVDLTALKNSINIFLSYYPEVLQKVILVNYPRWIHGTWKCVLPLLDARTVAKIVWVRDSTGLRSELRKYFDHNVLPMWLDGNAKNGTMRLFSGTQLNPEECRAKLWA 286
            M+SYFS  RT  + +EDAP+ +L E EASAL+AL  R  H F      LH  DPW TLT+ Q   LL+RFLRYNLL +E++ +H+ KVA WR+ + PWN  +  +Q   AG+PILSDVIRGR+ +VL+FIP R+Y KS++DR  Q TAIKAFFE   YA  GLKA+S +MLVDF+ L LKQVDL ALKN+INIFLS+YPEVL+KVILVNYPRWIHGTWKC++PLLDART+AK+VW+ +   LR+EL KY+D   LP+WL G  KNGTMRL+SG QL PEEC AKLW+
Sbjct:    1 MSSYFSFHRTVSKPIEDAPITSLAEHEASALSALDERINHIFLPSDTKLHAHDPWLTLTEQQRHCLLIRFLRYNLLHIENARSHIHKVATWRSTQRPWNLPISDMQGTPAGIPILSDVIRGREGDVLIFIPTRYYQKSLVDRSAQVTAIKAFFEYCSYAAHGLKATSGIMLVDFAALQLKQVDLVALKNAINIFLSFYPEVLKKVILVNYPRWIHGTWKCIVPLLDARTIAKVVWMHNGDALRTELHKYYDPEHLPLWLGGECKNGTMRLYSGYQLCPEECMAKLWS 287          
BLAST of Gchil2596.t1 vs. uniprot
Match: R7QKT2_CHOCR (CRAL-TRIO domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKT2_CHOCR)

HSP 1 Score: 234 bits (598), Expect = 3.160e-71
Identity = 118/282 (41.84%), Postives = 170/282 (60.28%), Query Frame = 0
Query:    1 MASYFSGFRTCRI--VEDAPLEALPESEASALTALQARTKHTFSSPHNNL-HPEDPWRTLTQNQVDLLLLRFLRYNLLQVESSFTHVCKVAAWRTDECPWNFGLELLQNRKAGVPILSDVIRGRDDEVLLFIPCRHYDKSIIDRKLQTTAIKAFFESYLYATGGLKASSAVMLVDFSGLHLKQVDLTALKNSINIFLSYYPEVLQKVILVNYPRWIHGTWKCVLPLLDARTVAKIVWVRDSTGLRSELRKYFDHNVLPMWLDGNAKNGTMRLFSGTQLNPEE 279
            M+SY   FR      V+DAPL +LP  E + LT L+A       +P + L HP DPWR L       L LRFLR++LLQ  ++  H  +VAAWR  + PW   L+ +    AG+P+L     GR+ +VL++   R Y ++ ++   Q  A+K FFES  YA G     SAV+++DF G+ +  VDL   KN I IF  +YP+V  KV++VNY RW+HGTWKC+  LLDARTV K++++ D+  +R EL K F    +P WL G+A +G ++L+ G  ++P+E
Sbjct:  141 MSSYLPSFRRAPSAPVDDAPLSSLPACELTPLTRLEAALHADIFAPTSTLLHPGDPWRALAPPNRRALALRFLRFHLLQEAAALEHARRVAAWRAADRPWERPLKAMAGPAAGLPVLPLHAPGRNGDVLVYSAARAYIRAQVNHAAQEEAVKTFFESTFYAQGAQTGLSAVVVLDFHGMSMSNVDLVGTKNGIRIFADFYPDVFSKVLVVNYARWLHGTWKCIAQLLDARTVRKVMFLSDTNQMREELSKSFAKADIPRWLGGDAGDGALQLYCGATIDPDE 422          
BLAST of Gchil2596.t1 vs. uniprot
Match: UPI0005C9BF75 (random slug protein 5-like n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C9BF75)

HSP 1 Score: 67.8 bits (164), Expect = 1.510e-9
Identity = 55/200 (27.50%), Postives = 84/200 (42.00%), Query Frame = 0
Query:   63 DLLLLRFLRYNLLQVESSFTHVCKVAAWRTDECP-WNFGLELLQNRKAGVPILSDVIRGRDDEVLLFIPCRHYDKSIIDRKLQTTAIKAFFESYLYATGGLKA------SSAVMLVDFSGLHLKQVDLTALKNSINIFLSYYPEVLQKVILVNYPRWIHGTWKCVLPLLDARTVAKIVWVRDSTGLRSELRKYFDHNVLP 255
            DL+L RFLR  +L VE +     K   WR    P  +     + N+ A   + S     R   + + +  RH+             +K F    +YA   L A         + + D  G      D+ A   +++I   YYPE L K+ +V+ P      WK V P +D +T  KIV+V +   L+S L +  D + LP
Sbjct:   66 DLMLRRFLRARVLDVEQASDMFLKYLKWRQSFAPNGSISASEVPNQIAQNKLFSQGSDKRGCPIAVLLGARHFQVK--------GGLKEFKRYVVYAFDKLCARMPPGQEKFIFIGDLEGWGYSNSDIRAYLGALSILQDYYPERLGKMFIVHVPFVFMTAWKIVCPFIDNKTKEKIVFVENKM-LKSTLLEEIDESQLP 256          
The following BLAST results are available for this feature:
BLAST of Gchil2596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IJM5_9FLOR3.620e-12762.02Phosphatidylinositol transfer protein CSR1 n=1 Tax... [more]
R7QKT2_CHOCR3.160e-7141.84CRAL-TRIO domain-containing protein n=1 Tax=Chondr... [more]
UPI0005C9BF751.510e-927.50random slug protein 5-like n=1 Tax=Fragaria vesca ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 106..263
e-value: 1.6E-11
score: 54.3
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 121..260
e-value: 3.2E-20
score: 72.5
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 103..266
score: 14.281655
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 120..261
e-value: 3.35011E-18
score: 77.8106
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 17..281
e-value: 3.7E-30
score: 107.1
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 122..263
NoneNo IPR availablePANTHERPTHR46277OS03G0850700 PROTEINcoord: 60..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1754551..1755534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2596.t1Gchil2596.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 1754551..1755534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2596.t1 ID=Gchil2596.t1|Name=Gchil2596.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=287bp
MASYFSGFRTCRIVEDAPLEALPESEASALTALQARTKHTFSSPHNNLHP
EDPWRTLTQNQVDLLLLRFLRYNLLQVESSFTHVCKVAAWRTDECPWNFG
LELLQNRKAGVPILSDVIRGRDDEVLLFIPCRHYDKSIIDRKLQTTAIKA
FFESYLYATGGLKASSAVMLVDFSGLHLKQVDLTALKNSINIFLSYYPEV
LQKVILVNYPRWIHGTWKCVLPLLDARTVAKIVWVRDSTGLRSELRKYFD
HNVLPMWLDGNAKNGTMRLFSGTQLNPEECRAKLWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf