Gchil2526.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2526.t1
Unique NameGchil2526.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length320
Homology
BLAST of Gchil2526.t1 vs. uniprot
Match: A0A2V3J0G5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0G5_9FLOR)

HSP 1 Score: 469 bits (1207), Expect = 2.160e-164
Identity = 235/305 (77.05%), Postives = 269/305 (88.20%), Query Frame = 0
Query:   15 AKKDASHGAFYSGFAKGMTSAVDGIILFAQSDTLRQQFWQLMKPIRNAQIAYASTGVLLFLILRDPADDISELFWTISRWGRIVTVLTSTILEYQYGATSAMFFAALKECDPEFGAAVENRTKTRKTMRERFSGLKRAAKLTMFKLAGAIIQKVFPGGKYIAVPAVKFISIRPVLGTGIAAAVSAVHAVPAEILESSRVDDVLVSFGEAVVDADEAGEDSVADYTKRLESAEMRSYFHKRYRGYLAGCGFVYSLLSAVPFLGIPLTLISQCGAACLVTSIVQRNLTKEFRKPLTCEEAIQNKKES 319
            A K+ASHGAFYSGF KGM SAV+GI LF +S+ L+ QFWQL+KPIRNAQIAYAS G+LLFL+LRDPADDI+ELFWT+SRWGRIVTVL S ILE QY AT+ MFFAALKE DP FGAAVENR K RKT+RER S  KRA KLT+FKLAG ++QK+FPGGKYIAVPA+KF+SIRPVLGTG+AAA++AVHA+PAE LESSRVDDVLVSFGEA+VDADE   DSV +YTKRLE+ EMR+YF KRYRGYLAGCGFVYSLLS++PFLGIPLTLIS+CGAACLVT I QRNL K+FR+PL CE+A+ + K S
Sbjct:   19 ATKNASHGAFYSGFLKGMASAVEGIQLFLRSEALQNQFWQLVKPIRNAQIAYASAGILLFLLLRDPADDITELFWTLSRWGRIVTVLASFILENQYSATTTMFFAALKERDPAFGAAVENREKHRKTLRERLSSFKRAGKLTLFKLAGVLVQKLFPGGKYIAVPAIKFVSIRPVLGTGVAAAIAAVHAIPAEALESSRVDDVLVSFGEAIVDADEMAGDSVVEYTKRLETPEMRTYFFKRYRGYLAGCGFVYSLLSSIPFLGIPLTLISECGAACLVTDIAQRNLDKQFRRPLICEDALGHAKTS 323          
BLAST of Gchil2526.t1 vs. uniprot
Match: R7QLX7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLX7_CHOCR)

HSP 1 Score: 388 bits (996), Expect = 1.230e-131
Identity = 190/312 (60.90%), Postives = 246/312 (78.85%), Query Frame = 0
Query:    8 ATDPGALAKKDASHGAFYSGFAKGMTSAVDGIILFAQSDTLRQQFWQLMKPIRNAQIAYASTGVLLFLILRDPADDISELFWTISRWGRIVTVLTSTILEYQYGATSAMFFAALKECDPEFGAAVENRTKTRKTMRERFSGLKRAAKLTMFKLAGAIIQKVFPGGKYIAVPAVKFISIRPVLGTGIAAAVSAVHAVPAEILESSRVDDVLVSFGEAVVDADEAGEDSVADYTKRLESAEMRSYFHKRYRGYLAGCGFVYSLLSAVPFLGIPLTLISQCGAACLVTSIVQRNLTKEFRKPLTCEEAIQNKKES 319
            A  P    KKDASHGAFY+GF KGM SA DG++LFA S  LR+ FW L+ P+RNAQIAY  TGVL+FL+LRDPADD +ELFWTISRWGRIVTVLT+ +LE +Y A S MFF AL+  +P F  A+++  KT  +++++++ +KR AKLT+FK  GAII ++FPGG+YIA+PAVKF+S+RPVLG  +AA ++++HA+P + LESSRVDD LVS GEA++DADE G D+  ++  RL+S E R YF +RYRGYL GCGFVYSLL AVP LGIP++LI++CGAAC+VT IV+RNL KE R+PL CE+ + + K S
Sbjct:   57 AEPPAPFQKKDASHGAFYAGFFKGMFSAFDGMLLFASSKQLRRVFWSLLAPMRNAQIAYVFTGVLIFLLLRDPADDAAELFWTISRWGRIVTVLTTFLLEKKYHANSIMFFEALQVLNPSFAQALKDTPKTNTSLKDKWNKVKRVAKLTLFKATGAIINRIFPGGRYIAIPAVKFVSMRPVLGAPVAAGLASIHAIPVQFLESSRVDDALVSVGEAILDADELGTDATREFHTRLDSEETRHYFAERYRGYLTGCGFVYSLLEAVPLLGIPMSLIAECGAACVVTDIVKRNLDKENRRPLVCEDKVNHDKTS 368          
The following BLAST results are available for this feature:
BLAST of Gchil2526.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0G5_9FLOR2.160e-16477.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLX7_CHOCR1.230e-13160.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 300..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 281..299
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..275
NoneNo IPR availableTMHMMTMhelixcoord: 257..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1464323..1465282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2526.t1Gchil2526.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 1464323..1465282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2526.t1 ID=Gchil2526.t1|Name=Gchil2526.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=320bp
MSATVIEATDPGALAKKDASHGAFYSGFAKGMTSAVDGIILFAQSDTLRQ
QFWQLMKPIRNAQIAYASTGVLLFLILRDPADDISELFWTISRWGRIVTV
LTSTILEYQYGATSAMFFAALKECDPEFGAAVENRTKTRKTMRERFSGLK
RAAKLTMFKLAGAIIQKVFPGGKYIAVPAVKFISIRPVLGTGIAAAVSAV
HAVPAEILESSRVDDVLVSFGEAVVDADEAGEDSVADYTKRLESAEMRSY
FHKRYRGYLAGCGFVYSLLSAVPFLGIPLTLISQCGAACLVTSIVQRNLT
KEFRKPLTCEEAIQNKKES*
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