Gchil2466.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2466.t1
Unique Name	Gchil2466.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	292

Homology

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BLAST of Gchil2466.t1 vs. uniprot
Match: A0A2V3J0M1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0M1_9FLOR)

HSP 1 Score: 157 bits (397), Expect = 2.410e-43
Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 0

Query:   81 FNSKNYNEFTFNHKFNDTDFTDAPKAVYDANADDLRAALDYMDSTFF-LGMPSSAWEEFSAMLDASFQDERGAVFYSILTGKWVFCAWVDMWANK-YFMRICASLISFGYSDISRAPIPDQDYITTGAMYQKIYGNTTAVVRKEEPESEPESESDVEPVDRTAIYVDLSEATDPYEETCMESERVIHNDCYAFCCHSLYIGSFYCTDFPLNCV 291
            FNS NYN FTFN  FN     D P A YD     +R  L+ +D+     G   S        L  SF+DE GA+FYSI + +W+FC W+D++ N+ YF+R+CA L SFG +DI+R PI  +DY+    M   I      V  K  P++     +   P  R  I V+L +  D YE  C+ +  +   DC+AFCC+S Y+GS +CTDFP+NC+
Sbjct:   34 FNSNNYNNFTFNAFFNSLSKPDFPGAYYDEEGPTIRWILNLLDTGLIHYGSNHSVLVLLQGSLLKSFEDETGAIFYSIHSNRWMFCGWLDLFLNEVYFLRLCAKLTSFGLTDITRIPISKEDYVLQEDMVNMIGVTDRTVNTKAIPDANSRLPN---PATRGVIDVNLDDYEDTYERNCLANSHLADQDCHAFCCNSYYVGSPFCTDFPVNCL 243

The following BLAST results are available for this feature:

BLAST of Gchil2466.t1 vs. uniprot

BLAST of Gchil2466.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0M1_9FLOR	2.410e-43	40.38	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..291

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004400_pilon	contig	tig00004400_pilon:1224285..1225233 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2466.t1	Gchil2466.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004400_pilon 1224285..1225233 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2466.t1 ID=Gchil2466.t1|Name=Gchil2466.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=292bp
MGSITHLLILLFILLCSLNESVVVKRLGASEIEHVLRKTFSSLLRDNPSR
NATHFAERSRGISRNRTARIVSRVPVSKDGFNSKNYNEFTFNHKFNDTDF
TDAPKAVYDANADDLRAALDYMDSTFFLGMPSSAWEEFSAMLDASFQDER
GAVFYSILTGKWVFCAWVDMWANKYFMRICASLISFGYSDISRAPIPDQD
YITTGAMYQKIYGNTTAVVRKEEPESEPESESDVEPVDRTAIYVDLSEAT
DPYEETCMESERVIHNDCYAFCCHSLYIGSFYCTDFPLNCV*