Gchil2406.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2406.t1
Unique NameGchil2406.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length214
Homology
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A2V3ISN4_9FLOR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN4_9FLOR)

HSP 1 Score: 273 bits (697), Expect = 3.010e-90
Identity = 136/209 (65.07%), Postives = 167/209 (79.90%), Query Frame = 0
Query:    1 MPWKTSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGLGGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKL 209
            MP K  YL+AYNVVQL LW    ++ ++S+ +  G   VYE+ A  A+TAQTLAWAEV+HA LG GGTV TA VQCLGR+VVL+ V+D I  IQ  +VT+ LL++W + D+VRYAFYIA I  RVP  LLWMRYSLFLVLYP GIVAEW+IYY TLP+V+ H+LY ++LPN+FNF+FDFG+WNRIVL+LY+YFGPFMF HML QR+KKL
Sbjct:    1 MPGKRGYLLAYNVVQLCLWTAVLVRCLVSTSSV-GLEHVYEAVAAIALTAQTLAWAEVVHAMLGFGGTVPTAVVQCLGRFVVLMLVVDRIDDIQGHIVTLFLLMAWSVGDIVRYAFYIAIITHRVPKVLLWMRYSLFLVLYPLGIVAEWLIYYRTLPFVDKHRLYAIALPNKFNFAFDFGVWNRIVLVLYLYFGPFMFSHMLSQRRKKL 208          
BLAST of Gchil2406.t1 vs. uniprot
Match: R7QJK1_CHOCR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJK1_CHOCR)

HSP 1 Score: 205 bits (522), Expect = 1.410e-63
Identity = 105/177 (59.32%), Postives = 133/177 (75.14%), Query Frame = 0
Query:   38 EVYESAATFAITAQTLAWAEVIHAGLGL-GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKLVAAN 213
            EVY     +A   Q+LAW EV+HA  GL GG V+TAFVQCLGRYVVL++V++ I  +    VT I+L +W LAD+VRY FYI + + R    +LW+RYSLFL+LYP GIV EW+IYY+TL YV+S +L+ V LPN +NF+FDFGIWNRIVL++Y+YFG FMF HM+ QRKKKL A  
Sbjct:   45 EVYYIYIPYAHRGQSLAWLEVMHAAFGLAGGGVATAFVQCLGRYVVLVYVVEPIAFMHSAWVTTIMLFAWALADVVRYLFYIQSYLSRPWQTVLWLRYSLFLILYPIGIVCEWLIYYFTLEYVDSQELFAVRLPNAWNFAFDFGIWNRIVLLMYLYFGVFMFTHMVQQRKKKLPAVR 221          
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A8J6E9P1_ELECQ (Uncharacterized protein n=3 Tax=Hyloidea TaxID=8417 RepID=A0A8J6E9P1_ELECQ)

HSP 1 Score: 132 bits (331), Expect = 2.600e-34
Identity = 75/207 (36.23%), Postives = 124/207 (59.90%), Query Frame = 0
Query:    5 TSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGL--GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKL 209
            T+YL+ YNV+  + W V A+ L+ +      Y  +Y S        QT A  E++H  LG+     V TAF Q L R  +   V  ++ ++Q+    ++ +V+W + +++RY+FY  +++  +P  + W RY+LF+VLYP G+  E +  Y  LPYV+   LY++SLPN++NFSFD+  +  +V++ Y+   P ++FHMLHQR+K L
Sbjct:   50 TAYLVIYNVIMTAGWLVIAVGLVRTYLAKGSYHSLYYSIERPLKFFQTGALLEIVHCALGIVPSSVVLTAF-QVLSRVFLTWAVTHSVREVQNEDSVLLFVVAWTITEIIRYSFYTFSLLNHLPFIIKWARYTLFIVLYPMGVAGELLTIYAALPYVQQTGLYSISLPNKYNFSFDYYTFLILVMVSYIPIFPQLYFHMLHQRRKVL 255          
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A7S0MWX6_9CHLO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWX6_9CHLO)

HSP 1 Score: 129 bits (324), Expect = 8.610e-34
Identity = 78/211 (36.97%), Postives = 125/211 (59.24%), Query Frame = 0
Query:    4 KTSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAI-TAQTLAWAEVIHAGLGLGGT-VSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIV---LILYMYFGPFMFFHMLHQRKKKL 209
            KT+YL  YN VQ  +WA  A+ L++    ++G  E   SA T  +   Q  A  E++HA  G+  + V TAFVQ   R   L+ V+D++ ++Q  +   I+  +W + ++VRY +Y  + I   P  L W+RY++F+ +YP G+V+E M+ Y+ LPY ++ ++YN+ +PN FNF FD   W++ +   LI Y +    ++ HM  QRKKKL
Sbjct:    4 KTAYLFTYNAVQSGIWAY-ALFLLVQELVSTGTHEGVHSAVTPVLRVGQVCALMEIVHAATGIVRSGVFTAFVQWFARTHCLVAVVDSVPEVQGEMWVAIMYAAWGITEVVRYPWYAFSTINACPGWLTWLRYTVFIPMYPFGVVSEMMLLYFALPYAKAREMYNIDMPNSFNFGFD---WHKFMVGGLIYYPFAWLQLYTHMFAQRKKKL 210          
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A8C6HIH5_MUSSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Mus spicilegus TaxID=10103 RepID=A0A8C6HIH5_MUSSI)

HSP 1 Score: 130 bits (326), Expect = 1.070e-33
Identity = 71/210 (33.81%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    2 PWKTSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGL--GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKL 209
            P  T+YL+ YNVV  + W V A+ L+ +      Y  +Y S        QT A  E++H  +G+     V T+F Q + R  ++  V  ++ ++Q     ++ +++W + +++RY+FY  +++  +P  + W RY+LF+VLYP G++ E +  Y  LP+V    LY++SLPN++NFSFD+  +  +++I Y+   P ++FHM+HQR+K L
Sbjct:   33 PVATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIVPSSVVLTSF-QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARYTLFIVLYPMGVIGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLILIMISYIPLFPQLYFHMIHQRRKVL 241          
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A1S3A421_ERIEU (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A1S3A421_ERIEU)

HSP 1 Score: 129 bits (324), Expect = 2.230e-33
Identity = 74/214 (34.58%), Postives = 124/214 (57.94%), Query Frame = 0
Query:    2 PWKTSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGL--GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKLVAAN 213
            P  T+YL+ YNVV  + W V A+ L+ +      Y  +Y S        QT A  E+ H  +G+     V T+F Q + R  ++  V  ++ ++Q     ++ +++W + +++RY+FY  +++  +P  + W RY+LF+VLYP G+  E +  Y  LP+V    LY++SLPN++NFSFD+  +  +V+I Y+   P ++FHMLHQR+K L  A 
Sbjct:   35 PLATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEIFHCAVGIVPSSVVLTSF-QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLILVMISYIPLFPQLYFHMLHQRRKVLSHAE 247          
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A7K8ZQC6_9PASS (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=16 Tax=Sauria TaxID=32561 RepID=A0A7K8ZQC6_9PASS)

HSP 1 Score: 128 bits (322), Expect = 2.480e-33
Identity = 75/207 (36.23%), Postives = 122/207 (58.94%), Query Frame = 0
Query:    5 TSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGL--GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKL 209
            T+YL+ YNVV  + W V A+ L+ +      Y  +Y S        QT A  E++H  LG+     V TAF Q + R  +   V  ++ ++Q     ++ +V+W + +++RY+FY  +++  +P  + W RY+LF+VLYP G+  E +  Y  LP+V    LY++SLPN++NFSFD+  +  +V+I Y+   P ++FHMLHQR+K L
Sbjct:   15 TAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCALGIVPSSVVLTAF-QVMSRVFLTWAVTHSVKEVQTEDSVLLFVVAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQSGLYSISLPNKYNFSFDYYTFLILVMISYIPIFPQLYFHMLHQRRKVL 220          
BLAST of Gchil2406.t1 vs. uniprot
Match: HACD2_MOUSE (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 n=27 Tax=Tetrapoda TaxID=32523 RepID=HACD2_MOUSE)

HSP 1 Score: 129 bits (323), Expect = 3.230e-33
Identity = 71/210 (33.81%), Postives = 124/210 (59.05%), Query Frame = 0
Query:    2 PWKTSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGL--GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKL 209
            P  T+YL+ YNVV  + W V A+ L+ +      Y  +Y S        QT A  E++H  +G+     V T+F Q + R  ++  V  ++ ++Q     ++ +++W + +++RY+FY  +++  +P  + W RY+LF+VLYP G+  E +  Y  LP+V    LY++SLPN++NFSFD+  +  +++I Y+   P ++FHM+HQR+K L
Sbjct:   36 PVATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIVPSSVVLTSF-QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLILIMISYIPLFPQLYFHMIHQRRKVL 244          
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A0G4IRI2_PLABS (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRI2_PLABS)

HSP 1 Score: 128 bits (322), Expect = 3.630e-33
Identity = 81/215 (37.67%), Postives = 125/215 (58.14%), Query Frame = 0
Query:    2 PWKTSYLMAYNVVQLSLWAVT---AIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGL-GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKLVAA 212
            P+   YL+A+NV   +LW V    AIQ +  S TA+G   +Y +   +   +Q LA  EV+HA +GL    V T  +Q   R  +L  V++ +  IQD     +L+ +W   ++ RYA+Y   +   VP  LLW+RYSLF+VLYP GI AE +  Y  +P+  + K ++V +PN  NF   F +  ++++++Y+   PF++ HM+HQRKK L AA
Sbjct:   15 PFVRLYLLAFNVASSALWGVVLALAIQHVWLSATATG---LYAAVQPWIRVSQGLAILEVVHAWVGLVRSPVMTVALQVASRLFILFTVVEQVPAIQDDWYVAMLVGAWACVEIPRYAYYALNLFDAVPYPLLWLRYSLFIVLYPIGISAELLCAYHAIPHFAATKQWSVLMPNMVNFELKFDVLIKMLMLVYVPGSPFLYLHMVHQRKKYLGAA 226          
BLAST of Gchil2406.t1 vs. uniprot
Match: A0A3L8SMZ7_CHLGU (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=137 Tax=Archelosauria TaxID=1329799 RepID=A0A3L8SMZ7_CHLGU)

HSP 1 Score: 128 bits (322), Expect = 3.730e-33
Identity = 75/207 (36.23%), Postives = 121/207 (58.45%), Query Frame = 0
Query:    5 TSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITAQTLAWAEVIHAGLGL--GGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTMILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWMIYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFHMLHQRKKKL 209
            T YL+ YNVV  + W V A+ L+ +      Y  +Y S        QT A  E++H  LG+     V TAF Q + R  +   V  ++ ++Q     ++ +V+W + +++RY+FY  +++  +P  + W RY+LF+VLYP G+  E +  Y  LP+V    LY++SLPN++NFSFD+  +  +V+I Y+   P ++FHMLHQR+K L
Sbjct:   31 TGYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCALGIVPSSVVLTAF-QVMSRVFLTWAVTHSVKEVQSEDSVLLFVVAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQSGLYSISLPNKYNFSFDYYTFLILVMISYIPIFPQLYFHMLHQRRKVL 236          
The following BLAST results are available for this feature:
BLAST of Gchil2406.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISN4_9FLOR3.010e-9065.07Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
R7QJK1_CHOCR1.410e-6359.32Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A8J6E9P1_ELECQ2.600e-3436.23Uncharacterized protein n=3 Tax=Hyloidea TaxID=841... [more]
A0A7S0MWX6_9CHLO8.610e-3436.97Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A8C6HIH5_MUSSI1.070e-3333.81Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A1S3A421_ERIEU2.230e-3334.58Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7K8ZQC6_9PASS2.480e-3336.23Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
HACD2_MOUSE3.230e-3333.81Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A0G4IRI2_PLABS3.630e-3337.67Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A3L8SMZ7_CHLGU3.730e-3336.23Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007482Protein-tyrosine phosphatase-like, PTPLAPFAMPF04387PTPLAcoord: 51..209
e-value: 3.5E-39
score: 134.1
IPR007482Protein-tyrosine phosphatase-like, PTPLAPANTHERPTHR11035PTPLA DOMAIN PROTEINcoord: 4..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..213
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..99
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 73..90
NoneNo IPR availableTMHMMTMhelixcoord: 180..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:668886..669527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2406.t1Gchil2406.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 668886..669527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2406.t1 ID=Gchil2406.t1|Name=Gchil2406.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=214bp
MPWKTSYLMAYNVVQLSLWAVTAIQLIISSKTASGYLEVYESAATFAITA
QTLAWAEVIHAGLGLGGTVSTAFVQCLGRYVVLIFVIDAITQIQDRLVTM
ILLVSWVLADLVRYAFYIATIIRRVPPALLWMRYSLFLVLYPAGIVAEWM
IYYWTLPYVESHKLYNVSLPNEFNFSFDFGIWNRIVLILYMYFGPFMFFH
MLHQRKKKLVAAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007482Tyr_Pase-like_PTPLA