Gchil2393.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2393.t1
Unique Name	Gchil2393.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	344

Homology

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A2V3IIF9_9FLOR (50S ribosomal protein L2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIF9_9FLOR)

HSP 1 Score: 564 bits (1454), Expect = 3.190e-201
Identity = 281/343 (81.92%), Postives = 301/343 (87.76%), Query Frame = 0

Query:    1 MSYSLPTLSRWLYPRHR-GVPNTLLPTPLHRHPKALGTFHGTIRRFCDITCPRVIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRRFD 342
            M   L  +SRWL  R   G+      T    + +  G  H  +R FCDITCP VIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSR TGRITVRHQGGGNKR+YRIIDFKRSAWE IPG+VQRIEYDPNRSALIALVRHQKKC A+KKKQRPD FAYI+CP GL+IGQTVVASR  P+DVKVGNAMTL+HVPVGT VHNIELRPG+G QMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVS+GQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNP+DHPHGGGEGKTSGGRPSVSKWG PTKG+RTRNKRK+S  YI+++R D
Sbjct:    1 MGSPLAAISRWLSLRQSSGLRQFARTTRDQVNFQLRGRAHTAVRTFCDITCPPVIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRTTGRITVRHQGGGNKRLYRIIDFKRSAWEGIPGLVQRIEYDPNRSALIALVRHQKKCAAIKKKQRPDRFAYILCPIGLKIGQTVVASRHDPLDVKVGNAMTLRHVPVGTTVHNIELRPGYGGQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSIGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPVDHPHGGGEGKTSGGRPSVSKWGMPTKGYRTRNKRKKSSVYIVRQRHD 343

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BLAST of Gchil2393.t1 vs. uniprot
Match: R7QM02_CHOCR (50S ribosomal protein L2, chloroplastic n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM02_CHOCR)

HSP 1 Score: 518 bits (1335), Expect = 2.510e-183
Identity = 258/318 (81.13%), Postives = 287/318 (90.25%), Query Frame = 0

Query:   29 HRHPKALGT--FHGTIRRFC-DITCPRVIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRRFDK 343
            H  P+++    F  ++R    DIT PRVIQRKPTTPSNRHTALTD+S LYKGRPHPRLSVGLP+RAGRSR TGRITVRH+GGGNKRMYRIIDFKR+AWESIPG+V+RIEYDPNRSALIALVRH+ KC AV KK RPD +AYIICP GLQIGQ V+ASR T VDVK GNAMTL+ VPVGT VHNIELRPG+GAQMCRSAGTSA+VLERDE +GLALLRLQSKEQRLVRL CMVS+G+VSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKG+RTR+K+K++  +I+KRRF++
Sbjct:   16 HTRPRSISASPFAFSVRTITHDITRPRVIQRKPTTPSNRHTALTDRSGLYKGRPHPRLSVGLPRRAGRSRTTGRITVRHKGGGNKRMYRIIDFKRTAWESIPGIVERIEYDPNRSALIALVRHKTKCKAVPKKVRPDRYAYIICPAGLQIGQEVIASRSTRVDVKTGNAMTLRFVPVGTKVHNIELRPGYGAQMCRSAGTSAQVLERDEGRGLALLRLQSKEQRLVRLQCMVSIGEVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGYRTRSKKKKNP-HIVKRRFER 332

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A7S1T562_9RHOD (50S ribosomal protein L2, chloroplastic n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T562_9RHOD)

HSP 1 Score: 351 bits (901), Expect = 3.660e-117
Identity = 185/307 (60.26%), Postives = 227/307 (73.94%), Query Frame = 0

Query:   41 TIRRFCDITCPRVIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRP-----DHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRRFD 342
            ++R   D T P +IQR+PTTPSNRHTAL D+S L+KGRP P L+ GL K  GR+   G ITVRH+GGG+KR+YR IDFKR       G V+RIEYDPNRS  IAL++H    P V    R      D ++YI+CP G+ IG  VVASR+  VDVK GNAMTL+++P+GTVVHNIE+ PG G Q+CRSAGTSA++LE++E + LALLRL SKE R V  +C+ +VG VSNPEHKN+S GKAGR RWKG RP VRGVAMNP+DHPHGGGEGK+SGGRPS S WG+  KG RT  + K S   I++RR++
Sbjct:   45 SLRSAGDPTRPGIIQRRPTTPSNRHTALIDRSLLFKGRPVPFLTTGLVKSGGRN-SRGVITVRHRGGGHKRLYRFIDFKRGQHLDREGRVKRIEYDPNRSGFIALIQHD---PLVGDDGRMLDKKMDRYSYILCPQGINIGSRVVASREVAVDVKPGNAMTLRNMPIGTVVHNIEMSPGRGGQLCRSAGTSAQLLEKNEERKLALLRLTSKEIRYVSWNCLATVGSVSNPEHKNESLGKAGRNRWKGRRPHVRGVAMNPVDHPHGGGEGKSSGGRPSCSPWGQLAKGFRTVRRNKCSP-LIVRRRYE 346

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BLAST of Gchil2393.t1 vs. uniprot
Match: L1IK39_GUITC (Ribosomal_L2_C domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IK39_GUITC)

HSP 1 Score: 319 bits (817), Expect = 1.310e-105
Identity = 171/276 (61.96%), Postives = 209/276 (75.72%), Query Frame = 0

Query:   57 KPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWES---IPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKR 329
            KPTTPS RHTAL DK  L+KG+P   L++GL K  GR++  GRITVRH+GGGNKR YRIIDF R+       I  VV+RIEYDPNRSALIAL+R     P + K      F+YIICP G++IGQ + +SR   V++K GNAM L+ V VGT+VHNIE+ PG GAQ+CRSAG +A +LE+DE+ GLALLR+QSKEQR V+L+C+ ++G+VSNPEH NQS GKAGR RWKG RP+VRGVAMNP+DHPHGGGEGK SG    VS WG  TKG++T  K+
Sbjct:    1 KPTTPSQRHTALIDKEYLWKGKPLKSLTIGLRKTGGRNK-DGRITVRHRGGGNKRRYRIIDFLRAPPHHEGVIMNVVERIEYDPNRSALIALLRCTT--PGLGKA-----FSYIICPLGIKIGQELESSRSQQVNMKDGNAMPLRFVQVGTLVHNIEMTPGKGAQLCRSAGAAAMLLEKDEATGLALLRMQSKEQRYVKLNCVATIGRVSNPEHMNQSLGKAGRNRWKGKRPSVRGVAMNPVDHPHGGGEGKKSG--RGVSPWGWNTKGYKTVRKK 266

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A7S0Y126_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y126_HEMAN)

HSP 1 Score: 321 bits (823), Expect = 1.880e-105
Identity = 165/292 (56.51%), Postives = 210/292 (71.92%), Query Frame = 0

Query:   37 TFHGTIRRFCDITCPRVIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESI-PGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDH--FAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRT 325
            T++G  RR  D T P VI+R+PTTPS RHTA+ DKS+L++G+P   L+ GL K   R    GRITVR +GGGNKR YRI+DF+R++ E I  G V RIEYDPNRS  I L++H       +    P H   +YI+CP G+ +G  V+AS+   +DV+VGNAM L+ +PVGT+VHN+E+ PG G Q+ RSAGTSA++LERD  + LALLR+QSKE R V L+CM +VG++SNPEHKN+S+GKAGR RW G RP VRGVAMNP+DHPHGGGEGK    RP  +K G   KG +T
Sbjct:   29 TWYGA-RRSLDPTAPSVIKRRPTTPSQRHTAIVDKSQLWRGKPERSLTRGLRKTGARGH-GGRITVRGRGGGNKRRYRIVDFQRASKEDIVEGTVTRIEYDPNRSGFICLLKHDVDRGEDQSMLLPKHVTLSYILCPRGITMGTKVMASKHEALDVQVGNAMQLRFIPVGTLVHNVEMTPGKGGQLARSAGTSAQLLERDTERNLALLRMQSKEVRYVPLNCMATVGEMSNPEHKNESWGKAGRSRWYGFRPKVRGVAMNPVDHPHGGGEGKKGTARPPTNKTGNVIKGKKT 318

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A0H5RAP6_9EUKA (Ribosomal_L2_C domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RAP6_9EUKA)

HSP 1 Score: 313 bits (801), Expect = 1.550e-101
Identity = 161/286 (56.29%), Postives = 209/286 (73.08%), Query Frame = 0

Query:   57 KPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRRFD 342
            KPTTP  R T L D+S L++GRP   L+V +  +AGR+   GRITVRH+GGG+KR YR++DFKRS  + +PGVVQR+EYDPNRS  IAL+++     A+  K   D+ AYII P GL++G TVVASR+ PVD+  GNAM ++H+P+G  +HN+E +PG GAQM RSAG+S  +LE++   G A+L++ SKE+R+  L CM ++G VSN +HK    GKAGR RW G RPTVRGVAMNP+DHP GGGEGKTSGGRPS S WGKP KG +TR   K +  +++ RR D
Sbjct:   65 KPTTPGMRGTVLLDRSHLWQGRPVRDLTVAMRSKAGRNN-QGRITVRHRGGGHKRRYRLMDFKRSIVD-VPGVVQRLEYDPNRSPYIALIKYD----AMSAK---DNLAYIIAPDGLKVGDTVVASRKEPVDIATGNAMCIRHIPLGAQIHNVETKPGKGAQMVRSAGSSCTLLEKNNETGYAVLKMPSKEERMFLLDCMATIGTVSNSDHKFVKLGKAGRSRWLGRRPTVRGVAMNPVDHPMGGGEGKTSGGRPSCSPWGKPAKGGKTRKVNKSN--FLIVRRRD 339

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A7J7IR20_9RHOD (50S ribosomal protein L2, chloroplastic n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IR20_9RHOD)

HSP 1 Score: 313 bits (803), Expect = 7.000e-101
Identity = 179/394 (45.43%), Postives = 229/394 (58.12%), Query Frame = 0

Query:   47 DITCPRVIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRH------QKKCPAV--------------------------------------------------------------------KKKQRP-----------------------DHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRRFDK 343
            D T P++ +RKPTTPSNR TAL D S LY+GRP  +L+ GL +  G     GRIT+ H+GGG++R+YRIIDF R  +  +PG V+RIEYDPNRSALIAL+R+      + K P V                                                                    K++QR                           +YIICP G++IG+ +V+    PV+ K GNA  L+ +P+GT VHNIE+RP  G ++CR+AGTSA++LE+DE + LALLRLQS+E R V L CM +VG VSNPEH NQS+GKAGR RW G RP  RGVAMNP+DHPHGGGEGKTSGGRPSV+ WGKPTKG+RT  K  +  K+I++RRF++
Sbjct:   60 DPTRPKIRRRKPTTPSNRATALIDYSVLYRGRPVKKLTQGLRRSTGGRNNQGRITIWHRGGGHRRLYRIIDFGRRLYAGLPGSVERIEYDPNRSALIALLRYPLPDAEEPKEPTVASDLYGGLADALRASAAPASAVEPRLVYLAQGPRGGDVAHGSSTESSSGPLLAVSTSRSNVALGQNDQKERQRALSSSEVVKTNVRILKRRAASRPKTRLSYIICPQGIRIGELLVSRVDGPVEPKPGNACPLRFLPIGTEVHNIEMRPRSGGKLCRAAGTSAQLLEKDEKRKLALLRLQSREVRYVHLDCMATVGAVSNPEHHNQSYGKAGRRRWLGRRPVTRGVAMNPVDHPHGGGEGKTSGGRPSVTPWGKPTKGYRTVRK-PRGAKFIVRRRFER 452

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A2E6QLQ2_9PROT (50S ribosomal protein L2 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QLQ2_9PROT)

HSP 1 Score: 305 bits (782), Expect = 3.590e-100
Identity = 160/286 (55.94%), Postives = 203/286 (70.98%), Query Frame = 0

Query:   55 QRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRR 340
            Q +PTTPS R   L D+S L+KG P   L+ GL K  GR+   GRITVRHQGGG+KR YR IDFKR  ++ +PG V+R+EYDPNR+A IAL+R+Q            D  AYI+ P  LQ+G TVVA  +  VDV+ GN M ++++PVGT++HN+E++ G G Q+ RSAGT A+++ +D   G ALLRL S EQR+VR  CM +VG VSNP+H+N + GKAGR RW G RP+VRGVAMNPIDHPHGGGEG+TSGGR  V+ WG PTKG RTR  +K  G  + +RR
Sbjct:    5 QHRPTTPSQRQLVLVDRSGLWKGGPEKSLTEGLSKSGGRNNY-GRITVRHQGGGHKRKYRRIDFKRKKFD-VPGTVERLEYDPNRTAFIALIRYQD-----------DEVAYILAPQRLQVGDTVVAGER--VDVRPGNCMPMRNMPVGTIIHNVEMKAGAGGQLARSAGTYAQLIGKDA--GYALLRLSSGEQRMVRGECMATVGAVSNPDHQNINIGKAGRARWLGKRPSVRGVAMNPIDHPHGGGEGRTSGGRHPVTPWGVPTKGKRTRKNKKSDGMILRRRR 273

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A2E8QZA0_9PROT (50S ribosomal protein L2 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E8QZA0_9PROT)

HSP 1 Score: 303 bits (776), Expect = 2.820e-99
Identity = 155/283 (54.77%), Postives = 209/283 (73.85%), Query Frame = 0

Query:   58 PTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRR 340
            PTTPS R   L D+S L+KG+P   L+ GL K+ GR+  TGRIT  H+GGG+KR YR+IDFKR+ ++ IP  V+R+EYDPNRSA IAL+++             D ++YII P  L +G  V++  Q  VD+K GNAM +K++PVGT++HNIE++PG GAQ+ R+AG+  +++ +D+  G ALL++ S EQR+VR  CM ++G VSNP+H+NQ+ GKAGR RW G RP VRGVAMNP+DHPHGGGEG+TSGGR  VS WGKPTKG RTR+ +K + ++IL+RR
Sbjct:    8 PTTPSRRELVLVDRSALWKGKPVKELTEGLNKKGGRNN-TGRITADHRGGGHKRRYRVIDFKRTKFD-IPATVERLEYDPNRSAFIALIKYSD-----------DEYSYIIAPQRLAVGDQVISGEQ--VDIKPGNAMPMKNIPVGTIIHNIEMKPGKGAQIARAAGSYVQLVGKDQ--GYALLKMCSGEQRMVRSDCMATIGAVSNPDHQNQNSGKAGRSRWLGKRPHVRGVAMNPVDHPHGGGEGRTSGGRHPVSPWGKPTKGKRTRSNKK-TDRFILRRR 272

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BLAST of Gchil2393.t1 vs. uniprot
Match: A0A1Y5SI45_9PROT (50S ribosomal protein L2 n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5SI45_9PROT)

HSP 1 Score: 300 bits (768), Expect = 5.070e-98
Identity = 159/287 (55.40%), Postives = 202/287 (70.38%), Query Frame = 0

Query:   57 KPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRITVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQKKCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHVPVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRLVRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRRFDK 343
            +PTTPS R+  L D+S L+KG+P   L+ GL K  GR+  TGRIT R  GGG+KR YR++DF+R  W+ + G V+R+EYDPNRSA IALVR++            D  AYI+ P  L +G TV+A  +  VD+K GNAM LK++PVGTV+HN+EL+ G G QM R+AGT  +++ +D   G A LRL S EQR+VR  CM ++G VSNP+ +N   GKAGR RW G RP+VRGVAMNP+DHPHGGGEG+TSGGR  V+ WGKPTKG RTR K K S K I++RR  K
Sbjct:    7 RPTTPSQRNLVLVDRSGLFKGKPVKSLTEGLSKNGGRNN-TGRITARRLGGGHKRAYRLVDFRRRKWDVV-GTVERLEYDPNRSAFIALVRYED-----------DELAYILAPQRLNVGDTVIAGDK--VDIKPGNAMPLKNIPVGTVIHNVELKAGKGGQMARAAGTYVQLIGKDS--GYAQLRLSSGEQRMVRGECMATIGAVSNPDQQNVKIGKAGRNRWLGKRPSVRGVAMNPVDHPHGGGEGRTSGGRHPVTPWGKPTKGARTRGK-KPSDKLIMRRRTQK 275

The following BLAST results are available for this feature:

BLAST of Gchil2393.t1 vs. uniprot

BLAST of Gchil2393.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IIF9_9FLOR	3.190e-201	81.92	50S ribosomal protein L2, chloroplastic n=1 Tax=Gr...	[more]
R7QM02_CHOCR	2.510e-183	81.13	50S ribosomal protein L2, chloroplastic n=1 Tax=Ch...	[more]
A0A7S1T562_9RHOD	3.660e-117	60.26	50S ribosomal protein L2, chloroplastic n=1 Tax=Co...	[more]
L1IK39_GUITC	1.310e-105	61.96	Ribosomal_L2_C domain-containing protein (Fragment...	[more]
A0A7S0Y126_HEMAN	1.880e-105	56.51	Hypothetical protein n=1 Tax=Hemiselmis andersenii...	[more]
A0A0H5RAP6_9EUKA	1.550e-101	56.29	Ribosomal_L2_C domain-containing protein (Fragment...	[more]
A0A7J7IR20_9RHOD	7.000e-101	45.43	50S ribosomal protein L2, chloroplastic n=1 Tax=Cy...	[more]
A0A2E6QLQ2_9PROT	3.590e-100	55.94	50S ribosomal protein L2 n=1 Tax=Rhodospirillaceae...	[more]
A0A2E8QZA0_9PROT	2.820e-99	54.77	50S ribosomal protein L2 n=3 Tax=Alphaproteobacter...	[more]
A0A1Y5SI45_9PROT	5.070e-98	55.40	50S ribosomal protein L2 n=1 Tax=Oceanibacterium h...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 189..319 e-value: 6.8E-81 score: 284.7
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 190..317 e-value: 1.1E-51 score: 174.2
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 92..181 e-value: 1.7E-31 score: 120.6
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 85..339
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 92..180 e-value: 2.9E-24 score: 84.8
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAM	TIGR01171	TIGR01171	coord: 55..340 e-value: 3.5E-99 score: 329.6
IPR005880	Ribosomal protein L2, bacterial/organellar-type	HAMAP	MF_01320_B	Ribosomal_L2_B	coord: 51..341 score: 39.890694
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 184..263 e-value: 2.4E-27 score: 96.7
None	No IPR available	GENE3D	2.40.50.140		coord: 52..177 e-value: 2.9E-34 score: 119.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..336
None	No IPR available	PANTHER	PTHR13691:SF5	39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL	coord: 85..339
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 264..341 e-value: 6.5E-34 score: 117.9
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 285..296
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 54..187
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 191..339

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004400_pilon	contig	tig00004400_pilon:380684..381715 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2393.t1	Gchil2393.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004400_pilon 380684..381715 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2393.t1 ID=Gchil2393.t1|Name=Gchil2393.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=344bp
MSYSLPTLSRWLYPRHRGVPNTLLPTPLHRHPKALGTFHGTIRRFCDITC
PRVIQRKPTTPSNRHTALTDKSKLYKGRPHPRLSVGLPKRAGRSRITGRI
TVRHQGGGNKRMYRIIDFKRSAWESIPGVVQRIEYDPNRSALIALVRHQK
KCPAVKKKQRPDHFAYIICPTGLQIGQTVVASRQTPVDVKVGNAMTLKHV
PVGTVVHNIELRPGHGAQMCRSAGTSARVLERDESKGLALLRLQSKEQRL
VRLSCMVSVGQVSNPEHKNQSFGKAGRMRWKGIRPTVRGVAMNPIDHPHG
GGEGKTSGGRPSVSKWGKPTKGHRTRNKRKQSGKYILKRRFDK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022669	Ribosomal_L2_C
IPR002171	Ribosomal_L2
IPR022666	Rbsml_prot_L2_RNA-bd_dom
IPR005880	Ribosomal_L2_bac/org-type
IPR014722	Rib_L2_dom2
IPR014726	Ribosomal_L2_dom3
IPR022671	Ribosomal_L2_CS
IPR012340	NA-bd_OB-fold
IPR008991	Translation_prot_SH3-like_sf