Gchil2374.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2374.t1
Unique Name	Gchil2374.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	267

Homology

[Close]

BLAST of Gchil2374.t1 vs. uniprot
Match: A0A2V3IQ15_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ15_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 5.510e-24
Identity = 55/192 (28.65%), Postives = 108/192 (56.25%), Query Frame = 0

Query:   29 TRRRSPNGAPNPLATKLDLDSAFFWLLLAFLLTAFTFLSLRDTHLSLNTAQLAEYERRSQFLSNSTVYIVEVGRPEALLNVLPKEDWKRISADIDLVAFVWDDL-PVFLTDGWVQAAERVLKPSTPVSNISLVLFQCGCVLPASYFSLVSNRLAGFECVLLPGWVLDSSHVHWLDVQ-EGDACKRREAVLSS 218
            +R RS     + L+ ++   +    L+   ++TA  + ++R   + L+  QL+ +ER+   L N ++Y+   G  + ++  L + +W+++++ ID VAFV+D++  + L   WV+A   +L+ S P +   +VLF CGC++P   F     R  G+EC++LPG+V+    VH+ ++  +   C++RE +  S
Sbjct:    5 SRTRSRKNLSSSLSKRIANAAPVLSLVTVIVVTAVYYTAIRSHDVELSFDQLSAFERQVTTLGNRSIYVCSGGNAKDMIYSLHRYEWEKVASKIDFVAFVYDEVYRMRLNSAWVEAVAGLLRESKP-NGYGVVLFSCGCIIPNVVFQRTEVRFGGYECMMLPGFVMSHEFVHFEELAAQRTPCRKRERITKS 195

The following BLAST results are available for this feature:

BLAST of Gchil2374.t1 vs. uniprot

BLAST of Gchil2374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IQ15_9FLOR	5.510e-24	28.65	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 5..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..266
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 50..68
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 69..266
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..49
None	No IPR available	TMHMM	TMhelix		coord: 49..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004400_pilon	contig	tig00004400_pilon:195671..196471 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2374.t1	Gchil2374.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004400_pilon 195671..196471 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2374.t1 ID=Gchil2374.t1|Name=Gchil2374.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=267bp
MHRQTSYMMPVQAKRPPRQNSSSSPAPTTRRRSPNGAPNPLATKLDLDSA
FFWLLLAFLLTAFTFLSLRDTHLSLNTAQLAEYERRSQFLSNSTVYIVEV
GRPEALLNVLPKEDWKRISADIDLVAFVWDDLPVFLTDGWVQAAERVLKP
STPVSNISLVLFQCGCVLPASYFSLVSNRLAGFECVLLPGWVLDSSHVHW
LDVQEGDACKRREAVLSSRLARRYRSELSDIHRVVTEHNNRVENVGLKTT
ADENGVEREKAPNESR*