Gchil2229.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2229.t2
Unique NameGchil2229.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1044
Homology
BLAST of Gchil2229.t2 vs. uniprot
Match: A0A2V3J2U4_9FLOR (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2U4_9FLOR)

HSP 1 Score: 1232 bits (3187), Expect = 0.000e+0
Identity = 651/1057 (61.59%), Postives = 794/1057 (75.12%), Query Frame = 0
Query:    1 MEGERPDIPLSRLTHDVVQNSYKELHAILDSLADYEPEDRQSRLLDTILNIRHRFARLSAAVKWYMAYSAFHSSARLARNVCQERSTVFTLDADTLWQVSATSRAAADHPSAIQEAAQVLSGAPSFNRVPKIIETAIGLDTKRDLRTISRVFFP-PANCDKDTI-------------LTKRNDIKRAEDVCMLTSPTQTADASNTVTQSTSFKSDLDALKKLQKASKTVSFDSTVSDDXXXXXXEVTKDAIERLRTTTRHVICDSLPEGVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMIWAYEEARASADANPIPKMLLCLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIASVGNREASSLTNSILCVGHEGELPAGPVDPSFSVKSINVEELLLDCCRIRAVHELQRICEAVQPKAGKNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKELYDSSRVLEELISRANKLLQREVTMRNVLGGGNDLMNCWPPGPAAVEEPEVSKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDEPFVYPGLSVSKRARSMPLMFSTSSDALAFIQGRCSLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREFEVLKLGNPLDGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEELNCRGQIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHVEVQ-SNGIHFTVRLGKRVVEVEATPRHSLLAHQFIPLVEEILQESAMEMGKRFGELLEMSLPMILAIQTALPPDPTAYKVRFSNALKARVSFGTVKGRPFAVDVDGRHGNGKVTIIDVPRAIQSIQKRDAQAIPYVAIPIWPQMVEKLVENGAASVDFGGAAIRISVAILHKILALIASKAGS 1042
            ME ER DIPLSRLTHDVVQNSYKELHA+LDSLADYEPEDRQSRLLD ILNIRHRFARLSA VKWYMAYSAFHSSAR+AR VC +RSTVFTLDADTLW VSA +RAAA HPSAIQEAAQVLSGA +FNR+P+IIET IGL+ KRD+R ISR+FFP PA  D   I              T    ++       L +  Q A++S    Q++  K+ L  ++K   ++ + S     SD+      +VT DA+ERLR TTRHVI  SLPEGV+LIKAGV+PCA AVRIGVP AWTADVILDKLK+DQAFVVLLRF+ILVDSHPDAPS IRS+FHDRERPVPL AEH+EPLRQML DRM+WAYEEA+A+ +   IPK+LLCL+ AMSFECCG LAMNHVRAQ  A H + LWK  D+S SGVG+DK+++S V I+YWLRSH++S + I  V N E++SL + IL V H  E+P    D S SVKSIN+E L+L CCR RAVHELQRI    Q K  + +S+ +N S R++  L+V F +QGVGI FGISL+SGGFFVR  G L  AL R DAL++D+RK+LW+ ERF      D SR  E L+S +  LL+ E  +R+ LGG  D+M  WPPG ++VE PEVSK  +++ PPF+AIEKKRPRRFMTL+S+A+EDDEP+++PGLS +KRARSMPL F+TSSD  AFIQGR S   N+P+  N    S+SVM +W  M+ +ID+R+RRD++LRE E LK+  P+DGD RL S HRTPLK+K +PM+ E+  + ++E G WEI LTLANE F+E N  GQ+V++  + R LRF+YPD + R+   FARD+LR RTAAALI GL+ ES+AY +  KLPSH++V+ S GI FTV L KRVVE++A P H L++  F+P  EEILQESAMEMGKR GELLEMSLPM LAIQ+ALP D   YKVRF+NALKARV FGT   RPFA+DVD RHG   V I DVPRA+Q+IQ  + Q++PY A+PIWPQM+E+LVE     +++GGAA+RI V IL +IL LIA KAGS
Sbjct:    1 MEAEREDIPLSRLTHDVVQNSYKELHALLDSLADYEPEDRQSRLLDAILNIRHRFARLSATVKWYMAYSAFHSSARIARRVCNDRSTVFTLDADTLWHVSANTRAAAAHPSAIQEAAQVLSGALTFNRLPRIIETFIGLEIKRDMRNISRIFFPSPAVRDSKRIQAPVANHSNHINSTTADAHVRADSSHVQLQNSKQNAESSYLPVQTSDLKNGLKDVRK-PVSNLSESGHEEFSDE------DVTTDAVERLRVTTRHVIRSSLPEGVKLIKAGVDPCAAAVRIGVPDAWTADVILDKLKLDQAFVVLLRFQILVDSHPDAPSTIRSRFHDRERPVPLLAEHREPLRQMLRDRMLWAYEEAKAANENEHIPKVLLCLAHAMSFECCGKLAMNHVRAQTIAFHKSNLWKYTDISFSGVGSDKENDSPVRIQYWLRSHLQSSVVITLVKNEESNSLPSRILQVEHGTEMPVNDFDASVSVKSINIEALVLKCCRTRAVHELQRIRSQTQEKVAEELSIDLNSSSRSSVCLLVHFGQQGVGISFGISLRSGGFFVRATGPLVTALSRGDALANDVRKELWNGERFSKGRTDDLSREFETLLSASLALLKSETAVRSALGGSADVMIGWPPGASSVETPEVSKDGRKVNPPFAAIEKKRPRRFMTLSSIANEDDEPYMFPGLSAAKRARSMPLPFTTSSDGYAFIQGRHSSPKNIPRGVNSLVCSSSVMADWMGMRNMIDMRLRRDHILRELEFLKVATPVDGDFRLQSSHRTPLKVKSSPMKVEESFLNVYENGTWEIELTLANELFDEHNYYGQVVSFSRKRRSLRFRYPDQSLRSIQCFARDVLRARTAAALINGLNAESNAYRLTVKLPSHIQVRHSKGITFTVGLCKRVVEIQARPHHPLVSVHFVPFAEEILQESAMEMGKRLGELLEMSLPMFLAIQSALPADRNVYKVRFTNALKARVIFGTANRRPFAIDVDARHGKESVMIYDVPRALQTIQS-EMQSVPYSAVPIWPQMIEQLVEKRVGKMEYGGAAVRIPVTILGQILHLIAKKAGS 1049          
BLAST of Gchil2229.t2 vs. uniprot
Match: R7QMP9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMP9_CHOCR)

HSP 1 Score: 511 bits (1315), Expect = 2.090e-162
Identity = 296/813 (36.41%), Postives = 458/813 (56.33%), Query Frame = 0
Query:  235 DAIERLRTTTRHVICDSLPEGVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMIWAYEEARASADANPIPKMLLCLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIASVGNREASSLTNSILCVGHEGELPAGPVDPSFSVKSINVEELLLDCCRIRAVHELQRICEAVQPKAGKNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKE-LYDSSRVLEELISRANKLLQREVTMRNVLGGGNDLMNCWPPGPAAVEEPEVSKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDEPFVYPGLSVSKRARSMPLMFS-TSSDALAFIQGRCSLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREFEVLKLGNPLDGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEELNCRGQIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHVEVQSNGIHFTVRLGKRVVEVEATPRHSLLAHQFIPLVEEILQESAMEMGKRFGELLEMSLPMILAIQTALPPDPTAYKVRFSNALKARVSFGTVKGRPFA------VDVDGRHGNGKVTIIDVPRAIQSIQ-KRDAQAIPYVAIPIWPQMVEKLVENGAASVDFGGAAIRISVAILHKILALIAS 1038
            +A ERL+ +T   + +S+P GV++I + V+P   AVRIGVP +WTADVILD+L ++ A ++LLRF ILV  HPDA S + + +  R+ P+ LR E +EPLRQM+SDRM W   +  A   A+ +   LLCLS  +S EC   +A+ HVR Q  AL     WK A +++SGVG++ + +  V +RYW +SH ++++          S     IL + H   LP G   P   ++ I+ E  LL+ CR RA HE++ + +  +     ++ M +  +G  ++SL V F      + FGIS K+GG FVR  G+++ A  R  + + + R  LW  ERFF K  L    RV  ++I +A  L++   ++      G   +  WPPG + VE+PE S   + I+PPF  +++KRPRRF+TL S+A EDDE +  PGL+ +KRARS+P+ F+ +SS+  AFI+GR       P  +NE  + A+ M     ++   ++R+RRDN+LRE  V    + +DGD  L SP+R+P+K+K + +E E   +I+    GW+I LTL N+ F+  N RGQ V+Y P  R+L F Y   +  T   F  D  R   +AALIKGLS       +VR+ PS V +  +    TV +  +  ++   P   +++    PL+EE+++ S M+ G+    LLE SLP+ LA+Q A    P + KV F  ALK +V +   +G+  A      +++D R+G  ++ I+D  R   S   +RD +      +P+W ++V+K+V           A + + +  L +ILA + S
Sbjct:   85 EATERLQVSTFCAVRNSMPTGVKVINSRVDPKNAAVRIGVPGSWTADVILDRLSLEDALLILLRFEILVGGHPDAQSVLNTPWRVRDEPMRLRTEQREPLRQMISDRMQWTMRDTEAVDKASRMKSALLCLSSILSLECAAKIAIEHVRTQLSALTQHTSWKIAKLALSGVGSEAKDDMPVRVRYWQKSHRKAEVAFRLPSQERLSDAIGGILQISHSPPLP-GRTHPKLEIRRIHAERYLLETCRHRAQHEVKELEKLCRLSIPSSIQMKI-AAGYTSSSLDVYFARPRPSLSFGISHKTGGLFVRLHGAVALAQSRAHSFASEFRNLLWVGERFFAKSGLPTMCRVAVDIIEKALSLVRLNSSLEGSCAIGVGFIPTWPPGDSFVEKPEKSNAGRMIRPPFMPVDRKRPRRFLTLCSMASEDDEVYCMPGLTATKRARSLPMHFTISSSENQAFIEGRRPEGVGQPDRSNEICSDANRMAILAEVRHATEVRMRRDNILRE--VKNYADVIDGDFSLRSPYRSPIKMKPSSLEVESAALIIKGNEGWQIRLTLTNDIFDATNLRGQTVSYFPAKRLLLFSYDVSSTTTLKRFFSDFERATKSAALIKGLSAGVEVCSIVRRGPSFVAIDVSKFRLTVGVRSKSFQLGILPPQPVISKNLFPLMEEVMEASEMDAGRTLARLLEASLPLGLALQEATRRLPESMKVYFFTALKVKVLYSLARGQLSAWGQFCCIEIDARYGAQRILIMDAFRVRASADAERDLKP-----VPVWEKIVKKVVSEKRGRSHRDNAVMEVPLRTLKQILASLTS 888          
BLAST of Gchil2229.t2 vs. uniprot
Match: A0A7S1TIA5_9RHOD (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIA5_9RHOD)

HSP 1 Score: 211 bits (537), Expect = 1.920e-52
Identity = 227/892 (25.45%), Postives = 382/892 (42.83%), Query Frame = 0
Query:  237 IERLRTTTRHVICDSLP--EGVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSK-FHDRERPVPLRAEHKEPLRQMLSDRMIWA---YEEARASADANPI---PKMLL-CLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIA--SVGNREASSLTNS--ILCVGHEGELPAGPVDPSFSVKSINVEELLLDCCRIRAVHELQRICEAV--QPKAG-KNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKELYDSSRVLEELISRANKLLQREVTMRNVLGGGNDLMNCWPPGPAAVEEPEVSKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDEP-FVYPGLSVSKRARSMPLMFSTSSDALAFIQGRCSLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREFEVLKLGNPL-------DGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEE---------------------LNCRGQIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHV-------EVQSNGIHFTVRLGKRVVEVEAT--------------PRHSLLAHQFIPLVEEILQESAMEMGKRFGELLEMSLPMILAIQTALPPDPTAYKVRFSNALKARVSFGTVKGRP------------FAVDVDGRHGNGKVTIIDVPRAIQSI---------QKRDAQAIPYVAIPIWPQMVEKLVENGAASVDFGGAAIRISVAILHKILALIASKA 1040
            ++RL   TR  +  SLP   G+++++      +  V +G+PHAW A++ LD L + ++   + R ++LV   P++ +   SK +  R   +P  A     LR++  DR+I     Y+    S   N     P++LL  L   +S E C   AM  +++QA  L  T   KS    V   G        + + YW  S   +KM+I+  SV  +    L++   ++ +GH+  L          + S+++EE+L+   + RA   LQ I E +  QP+   +   M V   G+   SLV+   E G  + F  SL++GG   +  G++    L    + D     LW+ ++ FG  + + + V   ++ R  + +Q E   R +      +    PPG  +V         Q + PPF+ +E+K PRRF+TL+   +  +EP     G    + A+   L ++T++D L FIQ   +L        + +  SA+    W   + +++ R+RRD+L+R F    +           DGD  + S  +  +K+K  P+      ++L     W++ LTL    F+                      +NC+G ++T         F YP  N  +  +F  DL R RTAAA  + L   +S Y+V+++ P  +           +G   T R       VE                P    +  Q  P +EE+L  SA  +G     LLE + P+  A+++A+  +    +VRF  AL+ RV F  V                 A DVD R G G   +IDV RA   +         Q  + +   Y  +P W  +V   V    A    GG+ + + + +L + L  + + A
Sbjct:  186 MQRLGAATRGAVQASLPGLSGIQVMRWRCGENSACVAVGLPHAWRAEISLDSLDMKRSIFRVHRVQVLVAPSPESVALRTSKRYPTRSVTIPQEAL----LRRLADDRVIAVARNYDNTFNSKGGNEEIVRPRILLEALRDLLSREFCVPFAMEILKSQAEVLSLTCQHKSMTCEVDKDG-------QIHVTYWKGSPSEAKMSISAGSVDGQGEMDLSDPELLISIGHDPPL-LHLSRHCLHLDSLDLEEILIAGMQSRARARLQAIAEDLHRQPELQLRKEDMCVASVGQHI-SLVILLRE-GNALCFSTSLRTGGLMGKPVGAIL-GYLEEGGIGD---AGLWEGDKVFGSLVAEGAAVSRAIV-RVRRRIQLESASRAMCVLDVGVTRSLPPGTPSVMGSNQKPSSQLV-PPFAQLERKAPRRFLTLSPPTERSEEPSLTSTGAGTDRVAKRQRLTYATTNDNLVFIQENSNLESCGR--VDRYSGSAAAALTWAVAREVVERRLRRDSLVRAFLAANVAVSTSQSTVYDDGDQDVCSASKKDIKVKCEPLPVRRAEVLLRGNDAWQVRLTLLPVIFDSTDHADTEEASNYPIDNPWSYGVNCKGSVLT---------FTYPFANAPSVTKFFMDLTRARTAAAFSRSLPP-ASMYKVIQRSPIRLVAAICPATTSDSGNGETRRRASYTATVEYVYTRANQGGFSVSFRPSRPTM-DQLAPYIEEVLDASAGAIGSILAGLLERACPVAAAVESAVR-ERALGRVRFVTALRMRVVFFGVPQNASRQRHPQAPTVAHAFDVDARGGGGTANVIDVGRASAGMVSQGFAHRGQGSEGRGRDYTPLPRWDTIVAAFVGQDFARSAVGGSTVTLQIEVLERFLTTLVNAA 1043          
BLAST of Gchil2229.t2 vs. uniprot
Match: A0A2V3IEM5_9FLOR (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM5_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 1.130e-42
Identity = 239/983 (24.31%), Postives = 382/983 (38.86%), Query Frame = 0
Query:    1 MEGERPDIPLSRLTHDVVQNSYKELHAILDSLADYEPEDRQSRLLDTILNIRHRFARLSAAVKWYMAYSAFHSSARLARNVCQERSTVFTLDADTLWQVSATSRAAADHPSAIQEAAQVLSGAPSFNRVPKIIETAIGLDTKRDLRTISRVFFPPANCDKDTILTKRNDIKRAEDVCMLTSPTQTADASNTVTQSTSFKSDLDALKKLQKASKTVSFDSTVSDDXXXXXXEVTKDAIERLRTTTRHVICDSLPE--GVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSKFHDRERPVP-----LRAEHKEPLRQMLSDRMIWAYEEARA----SADANPIPKMLLCLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIA------SVGNREASSLTNS------------ILCVGHEGELP----AGPVDPSF--SVKSINVEELLLDCCRIRAVHELQRICEAVQPKAG-----------------KNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKELYDSSRVLEELISRANKLLQREVTM----RNVLGGGNDLMNCWPPGPAAVEEPEV-SKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDE-PFVYPGLSVSKRARSMP--------------LMFSTSSDALAFIQGRC---------------------SLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREF-------EVLKLGNPLDGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEELNC----------------RG-----QIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHVEV 862
            M+    +  L+ +T      SY++L  IL +L + +   ++S LL   +N RH FARL A ++W+       + A L  +     + VF    D LW +SA          A+  A  +L+ + S                            PP +              + E+   L  P  T D S    Q T   +   A     +  K  SF              V+    ERL   TR+ + +S      V+++        V V IGVP  W ADV LD L    A + +   R+ V SH DAP    S +  +   V      L ++    LR+M  DRM  A +  RA    ++D N    M+  L   M+ E C  LAM+ +RAQA AL     W SA + V G   +   N+ + I YWL     + + I       SV + +A + T+             I CV HE  LP     G   PSF   +  +N+E+ L  C ++R+   +  I  A   +A                  +N   +  C        +        GI F I   +GG  +R  G+         AL+  LR++  D   + G   ++S     +   RA ++++  V +    R+V      + N  PPG A+V       +   ++ PPF+ +E++ PRRF+TL+   +  D    +  G + S R R+                L ++T+SD+L FIQ                        S+ +      + +  +A+    W   + +++ R++RD+L+R F       ++  +    D DL L S  R  L++K  P+      ++L     W++  +L    F+  +                 RG      +   C  ++ L F YP  NP +   F RDL R RTAAAL +G+   S  Y V+R+ P  + V
Sbjct:    1 MDSPPHEYSLASITSKACTVSYQQLRQILTALPNKDDATKKSFLLKYAINARHAFARLLAVLRWHKLQGTTAARANLVEDAAIANAQVFEDTVDNLWDISAYLSNKLTTRPAVASAVTLLTKSASH---------------------------PPHSTSHS----------KPENPRPLKRPRLTPDFSEVTQQLTPSITTPSA-----RPPKPSSFS----------LGAVSPSVTERLGIATRNCVRESQLHIGAVQVLSWRSGLADVCVSIGVPALWAADVSLDSLDPHLALLRVHSIRVFVASHIDAPQDDDSHWSSQRTTVNGQTSNLTSKQHALLRRMADDRMSTALKAVRAMTKSNSDVNSCSIMICALRDMMADEVCAPLAMDCLRAQARALCDGP-W-SAHIKVEGADPNPPRNTPLTISYWLPHRHPALIRIQQYPSTISVASPDAETPTHPQTERFRDVDRACISCV-HEPALPNAVELGKPHPSFVLQMNRLNLEDQLCACIKLRSCARITSISNAFLERASQLRVDPSCIMLSESRIARNDQAAERCVSANDVVSIRFGGSSATGIDFRIYNLTGGLRIRPYGAA--------ALAVPLRRES-DSNVWVGARQFESKSQEIDACIRAFEVIRARVKLDSAARSVCALDIGVSNTLPPGTASVAATASRDRAASQLVPPFAPLERRAPRRFLTLSPPPNSKDALNGLRVGTTSSSRYRTASARGFDRSSSSKRPRLTYATTSDSLVFIQESSFAGGDWRIGARDEEGCKTTSRSVQNTETDSIDRYSGTAAAAAAWAVTREVVERRLKRDSLIRAFYRASVFAQMHHMRTSEDSDLHLESASRVLLRVKCEPLPVRRAELLLRGYDVWQVRFSLLPSIFDSTDSVAVPDGSARSRCSSKSRGTGNLWSVGVSCTGSQ-LTFTYPSANPESVCSFFRDLTRARTAAALARGVPP-SRFYRVLRRSPVRIVV 917          
The following BLAST results are available for this feature:
BLAST of Gchil2229.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J2U4_9FLOR0.000e+061.59Mediator of RNA polymerase II transcription subuni... [more]
R7QMP9_CHOCR2.090e-16236.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TIA5_9RHOD1.920e-5225.45Mediator of RNA polymerase II transcription subuni... [more]
A0A2V3IEM5_9FLOR1.130e-4224.31Mediator of RNA polymerase II transcription subuni... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013947Mediator complex, subunit Med14PFAMPF08638Med14coord: 8..148
e-value: 4.8E-11
score: 42.4
IPR013947Mediator complex, subunit Med14PANTHERPTHR12809MEDIATOR COMPLEX SUBUNITcoord: 295..558
coord: 2..138
NoneNo IPR availablePANTHERPTHR12809:SF2MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 14coord: 295..558
NoneNo IPR availablePANTHERPTHR12809:SF2MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 14coord: 2..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000228_piloncontigtig00000228_pilon:363420..366551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2229.t2Gchil2229.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00000228_pilon 363420..366551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2229.t2 ID=Gchil2229.t2|Name=Gchil2229.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1044bp
MEGERPDIPLSRLTHDVVQNSYKELHAILDSLADYEPEDRQSRLLDTILN
IRHRFARLSAAVKWYMAYSAFHSSARLARNVCQERSTVFTLDADTLWQVS
ATSRAAADHPSAIQEAAQVLSGAPSFNRVPKIIETAIGLDTKRDLRTISR
VFFPPANCDKDTILTKRNDIKRAEDVCMLTSPTQTADASNTVTQSTSFKS
DLDALKKLQKASKTVSFDSTVSDDDDDEDEEVTKDAIERLRTTTRHVICD
SLPEGVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFR
ILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMIWAYEEAR
ASADANPIPKMLLCLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADV
SVSGVGADKQSNSSVEIRYWLRSHMRSKMTIASVGNREASSLTNSILCVG
HEGELPAGPVDPSFSVKSINVEELLLDCCRIRAVHELQRICEAVQPKAGK
NVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQAL
LRTDALSDDLRKKLWDEERFFGKELYDSSRVLEELISRANKLLQREVTMR
NVLGGGNDLMNCWPPGPAAVEEPEVSKGDQRIQPPFSAIEKKRPRRFMTL
ASVADEDDEPFVYPGLSVSKRARSMPLMFSTSSDALAFIQGRCSLHDNVP
KWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREFEVLKLGNPLDGDLR
LHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEELNCRGQ
IVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAY
EVVRKLPSHVEVQSNGIHFTVRLGKRVVEVEATPRHSLLAHQFIPLVEEI
LQESAMEMGKRFGELLEMSLPMILAIQTALPPDPTAYKVRFSNALKARVS
FGTVKGRPFAVDVDGRHGNGKVTIIDVPRAIQSIQKRDAQAIPYVAIPIW
PQMVEKLVENGAASVDFGGAAIRISVAILHKILALIASKAGSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013947Mediator_Med14