Gchil2229.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male
|
Overview
Homology
BLAST of Gchil2229.t2 vs. uniprot
Match: A0A2V3J2U4_9FLOR (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2U4_9FLOR) HSP 1 Score: 1232 bits (3187), Expect = 0.000e+0 Identity = 651/1057 (61.59%), Postives = 794/1057 (75.12%), Query Frame = 0
Query: 1 MEGERPDIPLSRLTHDVVQNSYKELHAILDSLADYEPEDRQSRLLDTILNIRHRFARLSAAVKWYMAYSAFHSSARLARNVCQERSTVFTLDADTLWQVSATSRAAADHPSAIQEAAQVLSGAPSFNRVPKIIETAIGLDTKRDLRTISRVFFP-PANCDKDTI-------------LTKRNDIKRAEDVCMLTSPTQTADASNTVTQSTSFKSDLDALKKLQKASKTVSFDSTVSDDXXXXXXEVTKDAIERLRTTTRHVICDSLPEGVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMIWAYEEARASADANPIPKMLLCLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIASVGNREASSLTNSILCVGHEGELPAGPVDPSFSVKSINVEELLLDCCRIRAVHELQRICEAVQPKAGKNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKELYDSSRVLEELISRANKLLQREVTMRNVLGGGNDLMNCWPPGPAAVEEPEVSKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDEPFVYPGLSVSKRARSMPLMFSTSSDALAFIQGRCSLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREFEVLKLGNPLDGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEELNCRGQIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHVEVQ-SNGIHFTVRLGKRVVEVEATPRHSLLAHQFIPLVEEILQESAMEMGKRFGELLEMSLPMILAIQTALPPDPTAYKVRFSNALKARVSFGTVKGRPFAVDVDGRHGNGKVTIIDVPRAIQSIQKRDAQAIPYVAIPIWPQMVEKLVENGAASVDFGGAAIRISVAILHKILALIASKAGS 1042
ME ER DIPLSRLTHDVVQNSYKELHA+LDSLADYEPEDRQSRLLD ILNIRHRFARLSA VKWYMAYSAFHSSAR+AR VC +RSTVFTLDADTLW VSA +RAAA HPSAIQEAAQVLSGA +FNR+P+IIET IGL+ KRD+R ISR+FFP PA D I T ++ L + Q A++S Q++ K+ L ++K ++ + S SD+ +VT DA+ERLR TTRHVI SLPEGV+LIKAGV+PCA AVRIGVP AWTADVILDKLK+DQAFVVLLRF+ILVDSHPDAPS IRS+FHDRERPVPL AEH+EPLRQML DRM+WAYEEA+A+ + IPK+LLCL+ AMSFECCG LAMNHVRAQ A H + LWK D+S SGVG+DK+++S V I+YWLRSH++S + I V N E++SL + IL V H E+P D S SVKSIN+E L+L CCR RAVHELQRI Q K + +S+ +N S R++ L+V F +QGVGI FGISL+SGGFFVR G L AL R DAL++D+RK+LW+ ERF D SR E L+S + LL+ E +R+ LGG D+M WPPG ++VE PEVSK +++ PPF+AIEKKRPRRFMTL+S+A+EDDEP+++PGLS +KRARSMPL F+TSSD AFIQGR S N+P+ N S+SVM +W M+ +ID+R+RRD++LRE E LK+ P+DGD RL S HRTPLK+K +PM+ E+ + ++E G WEI LTLANE F+E N GQ+V++ + R LRF+YPD + R+ FARD+LR RTAAALI GL+ ES+AY + KLPSH++V+ S GI FTV L KRVVE++A P H L++ F+P EEILQESAMEMGKR GELLEMSLPM LAIQ+ALP D YKVRF+NALKARV FGT RPFA+DVD RHG V I DVPRA+Q+IQ + Q++PY A+PIWPQM+E+LVE +++GGAA+RI V IL +IL LIA KAGS
Sbjct: 1 MEAEREDIPLSRLTHDVVQNSYKELHALLDSLADYEPEDRQSRLLDAILNIRHRFARLSATVKWYMAYSAFHSSARIARRVCNDRSTVFTLDADTLWHVSANTRAAAAHPSAIQEAAQVLSGALTFNRLPRIIETFIGLEIKRDMRNISRIFFPSPAVRDSKRIQAPVANHSNHINSTTADAHVRADSSHVQLQNSKQNAESSYLPVQTSDLKNGLKDVRK-PVSNLSESGHEEFSDE------DVTTDAVERLRVTTRHVIRSSLPEGVKLIKAGVDPCAAAVRIGVPDAWTADVILDKLKLDQAFVVLLRFQILVDSHPDAPSTIRSRFHDRERPVPLLAEHREPLRQMLRDRMLWAYEEAKAANENEHIPKVLLCLAHAMSFECCGKLAMNHVRAQTIAFHKSNLWKYTDISFSGVGSDKENDSPVRIQYWLRSHLQSSVVITLVKNEESNSLPSRILQVEHGTEMPVNDFDASVSVKSINIEALVLKCCRTRAVHELQRIRSQTQEKVAEELSIDLNSSSRSSVCLLVHFGQQGVGISFGISLRSGGFFVRATGPLVTALSRGDALANDVRKELWNGERFSKGRTDDLSREFETLLSASLALLKSETAVRSALGGSADVMIGWPPGASSVETPEVSKDGRKVNPPFAAIEKKRPRRFMTLSSIANEDDEPYMFPGLSAAKRARSMPLPFTTSSDGYAFIQGRHSSPKNIPRGVNSLVCSSSVMADWMGMRNMIDMRLRRDHILRELEFLKVATPVDGDFRLQSSHRTPLKVKSSPMKVEESFLNVYENGTWEIELTLANELFDEHNYYGQVVSFSRKRRSLRFRYPDQSLRSIQCFARDVLRARTAAALINGLNAESNAYRLTVKLPSHIQVRHSKGITFTVGLCKRVVEIQARPHHPLVSVHFVPFAEEILQESAMEMGKRLGELLEMSLPMFLAIQSALPADRNVYKVRFTNALKARVIFGTANRRPFAIDVDARHGKESVMIYDVPRALQTIQS-EMQSVPYSAVPIWPQMIEQLVEKRVGKMEYGGAAVRIPVTILGQILHLIAKKAGS 1049
BLAST of Gchil2229.t2 vs. uniprot
Match: R7QMP9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMP9_CHOCR) HSP 1 Score: 511 bits (1315), Expect = 2.090e-162 Identity = 296/813 (36.41%), Postives = 458/813 (56.33%), Query Frame = 0
Query: 235 DAIERLRTTTRHVICDSLPEGVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSKFHDRERPVPLRAEHKEPLRQMLSDRMIWAYEEARASADANPIPKMLLCLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIASVGNREASSLTNSILCVGHEGELPAGPVDPSFSVKSINVEELLLDCCRIRAVHELQRICEAVQPKAGKNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKE-LYDSSRVLEELISRANKLLQREVTMRNVLGGGNDLMNCWPPGPAAVEEPEVSKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDEPFVYPGLSVSKRARSMPLMFS-TSSDALAFIQGRCSLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREFEVLKLGNPLDGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEELNCRGQIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHVEVQSNGIHFTVRLGKRVVEVEATPRHSLLAHQFIPLVEEILQESAMEMGKRFGELLEMSLPMILAIQTALPPDPTAYKVRFSNALKARVSFGTVKGRPFA------VDVDGRHGNGKVTIIDVPRAIQSIQ-KRDAQAIPYVAIPIWPQMVEKLVENGAASVDFGGAAIRISVAILHKILALIAS 1038
+A ERL+ +T + +S+P GV++I + V+P AVRIGVP +WTADVILD+L ++ A ++LLRF ILV HPDA S + + + R+ P+ LR E +EPLRQM+SDRM W + A A+ + LLCLS +S EC +A+ HVR Q AL WK A +++SGVG++ + + V +RYW +SH ++++ S IL + H LP G P ++ I+ E LL+ CR RA HE++ + + + ++ M + +G ++SL V F + FGIS K+GG FVR G+++ A R + + + R LW ERFF K L RV ++I +A L++ ++ G + WPPG + VE+PE S + I+PPF +++KRPRRF+TL S+A EDDE + PGL+ +KRARS+P+ F+ +SS+ AFI+GR P +NE + A+ M ++ ++R+RRDN+LRE V + +DGD L SP+R+P+K+K + +E E +I+ GW+I LTL N+ F+ N RGQ V+Y P R+L F Y + T F D R +AALIKGLS +VR+ PS V + + TV + + ++ P +++ PL+EE+++ S M+ G+ LLE SLP+ LA+Q A P + KV F ALK +V + +G+ A +++D R+G ++ I+D R S +RD + +P+W ++V+K+V A + + + L +ILA + S
Sbjct: 85 EATERLQVSTFCAVRNSMPTGVKVINSRVDPKNAAVRIGVPGSWTADVILDRLSLEDALLILLRFEILVGGHPDAQSVLNTPWRVRDEPMRLRTEQREPLRQMISDRMQWTMRDTEAVDKASRMKSALLCLSSILSLECAAKIAIEHVRTQLSALTQHTSWKIAKLALSGVGSEAKDDMPVRVRYWQKSHRKAEVAFRLPSQERLSDAIGGILQISHSPPLP-GRTHPKLEIRRIHAERYLLETCRHRAQHEVKELEKLCRLSIPSSIQMKI-AAGYTSSSLDVYFARPRPSLSFGISHKTGGLFVRLHGAVALAQSRAHSFASEFRNLLWVGERFFAKSGLPTMCRVAVDIIEKALSLVRLNSSLEGSCAIGVGFIPTWPPGDSFVEKPEKSNAGRMIRPPFMPVDRKRPRRFLTLCSMASEDDEVYCMPGLTATKRARSLPMHFTISSSENQAFIEGRRPEGVGQPDRSNEICSDANRMAILAEVRHATEVRMRRDNILRE--VKNYADVIDGDFSLRSPYRSPIKMKPSSLEVESAALIIKGNEGWQIRLTLTNDIFDATNLRGQTVSYFPAKRLLLFSYDVSSTTTLKRFFSDFERATKSAALIKGLSAGVEVCSIVRRGPSFVAIDVSKFRLTVGVRSKSFQLGILPPQPVISKNLFPLMEEVMEASEMDAGRTLARLLEASLPLGLALQEATRRLPESMKVYFFTALKVKVLYSLARGQLSAWGQFCCIEIDARYGAQRILIMDAFRVRASADAERDLKP-----VPVWEKIVKKVVSEKRGRSHRDNAVMEVPLRTLKQILASLTS 888
BLAST of Gchil2229.t2 vs. uniprot
Match: A0A7S1TIA5_9RHOD (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIA5_9RHOD) HSP 1 Score: 211 bits (537), Expect = 1.920e-52 Identity = 227/892 (25.45%), Postives = 382/892 (42.83%), Query Frame = 0
Query: 237 IERLRTTTRHVICDSLP--EGVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSK-FHDRERPVPLRAEHKEPLRQMLSDRMIWA---YEEARASADANPI---PKMLL-CLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIA--SVGNREASSLTNS--ILCVGHEGELPAGPVDPSFSVKSINVEELLLDCCRIRAVHELQRICEAV--QPKAG-KNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKELYDSSRVLEELISRANKLLQREVTMRNVLGGGNDLMNCWPPGPAAVEEPEVSKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDEP-FVYPGLSVSKRARSMPLMFSTSSDALAFIQGRCSLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREFEVLKLGNPL-------DGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEE---------------------LNCRGQIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHV-------EVQSNGIHFTVRLGKRVVEVEAT--------------PRHSLLAHQFIPLVEEILQESAMEMGKRFGELLEMSLPMILAIQTALPPDPTAYKVRFSNALKARVSFGTVKGRP------------FAVDVDGRHGNGKVTIIDVPRAIQSI---------QKRDAQAIPYVAIPIWPQMVEKLVENGAASVDFGGAAIRISVAILHKILALIASKA 1040
++RL TR + SLP G+++++ + V +G+PHAW A++ LD L + ++ + R ++LV P++ + SK + R +P A LR++ DR+I Y+ S N P++LL L +S E C AM +++QA L T KS V G + + YW S +KM+I+ SV + L++ ++ +GH+ L + S+++EE+L+ + RA LQ I E + QP+ + M V G+ SLV+ E G + F SL++GG + G++ L + D LW+ ++ FG + + + V ++ R + +Q E R + + PPG +V Q + PPF+ +E+K PRRF+TL+ + +EP G + A+ L ++T++D L FIQ +L + + SA+ W + +++ R+RRD+L+R F + DGD + S + +K+K P+ ++L W++ LTL F+ +NC+G ++T F YP N + +F DL R RTAAA + L +S Y+V+++ P + +G T R VE P + Q P +EE+L SA +G LLE + P+ A+++A+ + +VRF AL+ RV F V A DVD R G G +IDV RA + Q + + Y +P W +V V A GG+ + + + +L + L + + A
Sbjct: 186 MQRLGAATRGAVQASLPGLSGIQVMRWRCGENSACVAVGLPHAWRAEISLDSLDMKRSIFRVHRVQVLVAPSPESVALRTSKRYPTRSVTIPQEAL----LRRLADDRVIAVARNYDNTFNSKGGNEEIVRPRILLEALRDLLSREFCVPFAMEILKSQAEVLSLTCQHKSMTCEVDKDG-------QIHVTYWKGSPSEAKMSISAGSVDGQGEMDLSDPELLISIGHDPPL-LHLSRHCLHLDSLDLEEILIAGMQSRARARLQAIAEDLHRQPELQLRKEDMCVASVGQHI-SLVILLRE-GNALCFSTSLRTGGLMGKPVGAIL-GYLEEGGIGD---AGLWEGDKVFGSLVAEGAAVSRAIV-RVRRRIQLESASRAMCVLDVGVTRSLPPGTPSVMGSNQKPSSQLV-PPFAQLERKAPRRFLTLSPPTERSEEPSLTSTGAGTDRVAKRQRLTYATTNDNLVFIQENSNLESCGR--VDRYSGSAAAALTWAVAREVVERRLRRDSLVRAFLAANVAVSTSQSTVYDDGDQDVCSASKKDIKVKCEPLPVRRAEVLLRGNDAWQVRLTLLPVIFDSTDHADTEEASNYPIDNPWSYGVNCKGSVLT---------FTYPFANAPSVTKFFMDLTRARTAAAFSRSLPP-ASMYKVIQRSPIRLVAAICPATTSDSGNGETRRRASYTATVEYVYTRANQGGFSVSFRPSRPTM-DQLAPYIEEVLDASAGAIGSILAGLLERACPVAAAVESAVR-ERALGRVRFVTALRMRVVFFGVPQNASRQRHPQAPTVAHAFDVDARGGGGTANVIDVGRASAGMVSQGFAHRGQGSEGRGRDYTPLPRWDTIVAAFVGQDFARSAVGGSTVTLQIEVLERFLTTLVNAA 1043
BLAST of Gchil2229.t2 vs. uniprot
Match: A0A2V3IEM5_9FLOR (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM5_9FLOR) HSP 1 Score: 181 bits (458), Expect = 1.130e-42 Identity = 239/983 (24.31%), Postives = 382/983 (38.86%), Query Frame = 0
Query: 1 MEGERPDIPLSRLTHDVVQNSYKELHAILDSLADYEPEDRQSRLLDTILNIRHRFARLSAAVKWYMAYSAFHSSARLARNVCQERSTVFTLDADTLWQVSATSRAAADHPSAIQEAAQVLSGAPSFNRVPKIIETAIGLDTKRDLRTISRVFFPPANCDKDTILTKRNDIKRAEDVCMLTSPTQTADASNTVTQSTSFKSDLDALKKLQKASKTVSFDSTVSDDXXXXXXEVTKDAIERLRTTTRHVICDSLPE--GVELIKAGVEPCAVAVRIGVPHAWTADVILDKLKVDQAFVVLLRFRILVDSHPDAPSAIRSKFHDRERPVP-----LRAEHKEPLRQMLSDRMIWAYEEARA----SADANPIPKMLLCLSQAMSFECCGLLAMNHVRAQAFALHSTQLWKSADVSVSGVGADKQSNSSVEIRYWLRSHMRSKMTIA------SVGNREASSLTNS------------ILCVGHEGELP----AGPVDPSF--SVKSINVEELLLDCCRIRAVHELQRICEAVQPKAG-----------------KNVSMSVNCSGRATTSLVVCFDEQGVGILFGISLKSGGFFVRTKGSLSQALLRTDALSDDLRKKLWDEERFFGKELYDSSRVLEELISRANKLLQREVTM----RNVLGGGNDLMNCWPPGPAAVEEPEV-SKGDQRIQPPFSAIEKKRPRRFMTLASVADEDDE-PFVYPGLSVSKRARSMP--------------LMFSTSSDALAFIQGRC---------------------SLHDNVPKWTNEFQNSASVMRNWTFMKILIDLRIRRDNLLREF-------EVLKLGNPLDGDLRLHSPHRTPLKLKVAPMEAEDVHMILHEEGGWEIVLTLANEQFEELNC----------------RG-----QIVTYCPRTRVLRFKYPDHNPRTAYEFARDLLRTRTAAALIKGLSTESSAYEVVRKLPSHVEV 862
M+ + L+ +T SY++L IL +L + + ++S LL +N RH FARL A ++W+ + A L + + VF D LW +SA A+ A +L+ + S PP + + E+ L P T D S Q T + A + K SF V+ ERL TR+ + +S V+++ V V IGVP W ADV LD L A + + R+ V SH DAP S + + V L ++ LR+M DRM A + RA ++D N M+ L M+ E C LAM+ +RAQA AL W SA + V G + N+ + I YWL + + I SV + +A + T+ I CV HE LP G PSF + +N+E+ L C ++R+ + I A +A +N + C + GI F I +GG +R G+ AL+ LR++ D + G ++S + RA ++++ V + R+V + N PPG A+V + ++ PPF+ +E++ PRRF+TL+ + D + G + S R R+ L ++T+SD+L FIQ S+ + + + +A+ W + +++ R++RD+L+R F ++ + D DL L S R L++K P+ ++L W++ +L F+ + RG + C ++ L F YP NP + F RDL R RTAAAL +G+ S Y V+R+ P + V
Sbjct: 1 MDSPPHEYSLASITSKACTVSYQQLRQILTALPNKDDATKKSFLLKYAINARHAFARLLAVLRWHKLQGTTAARANLVEDAAIANAQVFEDTVDNLWDISAYLSNKLTTRPAVASAVTLLTKSASH---------------------------PPHSTSHS----------KPENPRPLKRPRLTPDFSEVTQQLTPSITTPSA-----RPPKPSSFS----------LGAVSPSVTERLGIATRNCVRESQLHIGAVQVLSWRSGLADVCVSIGVPALWAADVSLDSLDPHLALLRVHSIRVFVASHIDAPQDDDSHWSSQRTTVNGQTSNLTSKQHALLRRMADDRMSTALKAVRAMTKSNSDVNSCSIMICALRDMMADEVCAPLAMDCLRAQARALCDGP-W-SAHIKVEGADPNPPRNTPLTISYWLPHRHPALIRIQQYPSTISVASPDAETPTHPQTERFRDVDRACISCV-HEPALPNAVELGKPHPSFVLQMNRLNLEDQLCACIKLRSCARITSISNAFLERASQLRVDPSCIMLSESRIARNDQAAERCVSANDVVSIRFGGSSATGIDFRIYNLTGGLRIRPYGAA--------ALAVPLRRES-DSNVWVGARQFESKSQEIDACIRAFEVIRARVKLDSAARSVCALDIGVSNTLPPGTASVAATASRDRAASQLVPPFAPLERRAPRRFLTLSPPPNSKDALNGLRVGTTSSSRYRTASARGFDRSSSSKRPRLTYATTSDSLVFIQESSFAGGDWRIGARDEEGCKTTSRSVQNTETDSIDRYSGTAAAAAAWAVTREVVERRLKRDSLIRAFYRASVFAQMHHMRTSEDSDLHLESASRVLLRVKCEPLPVRRAELLLRGYDVWQVRFSLLPSIFDSTDSVAVPDGSARSRCSSKSRGTGNLWSVGVSCTGSQ-LTFTYPSANPESVCSFFRDLTRARTAAALARGVPP-SRFYRVLRRSPVRIVV 917 The following BLAST results are available for this feature:
BLAST of Gchil2229.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil2229.t2 ID=Gchil2229.t2|Name=Gchil2229.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1044bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|