Gchil2149.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2149.t1
Unique Name	Gchil2149.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	287

Homology

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BLAST of Gchil2149.t1 vs. uniprot
Match: A0A2V3ITT2_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITT2_9FLOR)

HSP 1 Score: 257 bits (656), Expect = 5.330e-82
Identity = 173/288 (60.07%), Postives = 196/288 (68.06%), Query Frame = 0

Query:    1 MAETPCAQAAPVASHSTSLPLDAQGVTNAAEDHDSIHSKLSSPDADDSVLELLPELTTAHSTPDLAQVHNPQQIRVPSKRSSFCRKIVKNKNG--AKDVPKIEVAQPLAPALSAASHPLATIXXXXXXXXXXXX-ALANPSLLAHPFVSLPLQAPRRAVRIAPMGVLPLPPPGAAALVADFHAASVVPDEAPRLHEICKAKRRGSTVATVVSEQALSPEERTRQKRMLRNRESAARSRDKRRNRNIQLQRSIQRYRDKKKAMDEAIQELKLLCECMRHTLEKHNIAVP 285
            MAE+PC Q AP    S++   DAQ    +  D  S     S P       ++  + TTA  T    Q  +P    VP     FCRK  K+K+    K   KI+VAQPLAPAL A+SH LATI XXXXXX      ALA P LL HP VSLPLQAPRRAVRIAPMGV+PLPPPGAAALVADFHAA VV +E PRL+E+ K+KRR ST + VV EQ  SPEE  RQKRMLRNRESAARSRDKRRNRN+ LQ SI+RYRDKKK MD AI ELK LC+ MR TLEKHN++VP
Sbjct:    1 MAESPCVQQAPDTQPSSAPSSDAQAPRESPPDEGSPVKTASDP-------QITFDTTTASPT----QTTDPTLPHVP-----FCRKPAKSKSSIRVKSATKIDVAQPLAPALGASSHALATIPXXXXXXAAYPFPALAAPHLLPHPLVSLPLQAPRRAVRIAPMGVMPLPPPGAAALVADFHAA-VVAEENPRLNELSKSKRRTSTASAVVPEQTFSPEEMARQKRMLRNRESAARSRDKRRNRNMHLQSSIERYRDKKKEMDSAILELKALCQTMRSTLEKHNVSVP 271

[Close]

BLAST of Gchil2149.t1 vs. uniprot
Match: R7QF01_CHOCR (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF01_CHOCR)

HSP 1 Score: 95.9 bits (237), Expect = 4.040e-19
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0

Query:  135 ANPSLLAHP-FVSLPLQAPRRAVRIAPMGVLPLPPPG--AAALVADFH---AASVVPDEAPR-------------------LHEICKAKRRGSTVATVVSEQALSPEERTRQKRMLRNRESAARSRDKRRNRNIQLQRSIQRYRDKKKAMDEAIQELKLLCECMRHTLEKHN 281
            AN + +  P  VS+P+   RRAVRIAPMGVLPLPP    A ++V D     +A +VP  +                     + ++ K KRRG+   +  + + ++PEERT+QKRMLRNRESAARSRDKR+ +NIQL+ SI ++  K   +++ ++EL+ +  CM+  L   N
Sbjct:  179 ANGAPIMSPSMVSVPMTVGRRAVRIAPMGVLPLPPQSTVATSMVPDLTNSTSAGLVPPASGSEGATIESHLNASTGGAGAIIGDMPKGKRRGTPGGSSTNPEGMTPEERTKQKRMLRNRESAARSRDKRKTKNIQLETSIAKHTKKNLMLEKVLRELQDVIRCMQQELSNQN 350

The following BLAST results are available for this feature:

BLAST of Gchil2149.t1 vs. uniprot

BLAST of Gchil2149.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3ITT2_9FLOR	5.330e-82	60.07	BZIP domain-containing protein n=1 Tax=Gracilariop...	[more]
R7QF01_CHOCR	4.040e-19	40.12	BZIP domain-containing protein n=1 Tax=Chondrus cr...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..269
None	No IPR available	GENE3D	1.20.5.170		coord: 218..273 e-value: 1.4E-5 score: 26.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..239
None	No IPR available	CDD	cd14686	bZIP	coord: 220..267 e-value: 1.72057E-8 score: 47.9253
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 220..275
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 214..279 e-value: 4.9E-5 score: 32.7
IPR004827	Basic-leucine zipper domain	PFAM	PF07716	bZIP_2	coord: 219..267 e-value: 6.6E-5 score: 22.9
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 222..237
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 217..280 score: 9.518928

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000228_pilon	contig	tig00000228_pilon:48021..48881 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2149.t1	Gchil2149.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000228_pilon 48021..48881 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2149.t1 ID=Gchil2149.t1|Name=Gchil2149.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=287bp
MAETPCAQAAPVASHSTSLPLDAQGVTNAAEDHDSIHSKLSSPDADDSVL
ELLPELTTAHSTPDLAQVHNPQQIRVPSKRSSFCRKIVKNKNGAKDVPKI
EVAQPLAPALSAASHPLATIPLAPAMSAYSFPALANPSLLAHPFVSLPLQ
APRRAVRIAPMGVLPLPPPGAAALVADFHAASVVPDEAPRLHEICKAKRR
GSTVATVVSEQALSPEERTRQKRMLRNRESAARSRDKRRNRNIQLQRSIQ
RYRDKKKAMDEAIQELKLLCECMRHTLEKHNIAVPP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004827	bZIP