Gchil2065.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2065.t1
Unique NameGchil2065.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length387
Homology
BLAST of Gchil2065.t1 vs. uniprot
Match: A0A2V3IYA0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA0_9FLOR)

HSP 1 Score: 278 bits (712), Expect = 9.460e-88
Identity = 164/330 (49.70%), Postives = 209/330 (63.33%), Query Frame = 0
Query:   19 LVGGLPFSSIGLGVGKAS-QGDVFGTSNVYGSGNFASIGTGASGKGVSGSTSVISPVQATDKDVSL-PIGSPEAAIDIELSSILNRGLQAAVPDYRDTSGSSEKSYATGASENKTSHPNTRD--SSEKPGIANHPKVCWTMSKRCCYEEVQKGYECKDFYAHKYTRCHPVIEYEAVCGKIEERPAHHPRPKGRVKYEETVLKNYDARYGPHVTGYPENGESEYYKVDTIPVKPRGVSGTPVSAPQSYQSKSGSTTNEAYMAEEDGEDIVSIVPYETKSNRDQQYGALGDSKGHEKKAA----------NLIPKSTENATAG--AEGSYEV 332
            L   + FSSIGLG G  S +  VFG S V G+GN A++GTG SG GVSG+TSVISP   T  +  +   GSP A  +++LSS+L R ++A VPDYRDT G+S    +T +SE K      +   SS +    + PK+CWT+SK CCYEEVQKGYECKD+YA+KY RCHPVIE++ VCG I+E PA HPRPKGRVKYEE+VLKNYDA YGPHV GYP++GESEYY+ DTIP KP GV+     APQ+Y+S SG  T +    +   E  + +   E      Q Y A G  + ++ + A          N+   S E+A  G  A GS E+
Sbjct:   20 LARAVSFSSIGLGAGAGSPKFGVFGLSGVLGNGNIAAVGTGGSGGGVSGATSVISPAGKTSNEGDVVAAGSPGAIPNMDLSSLLARPVEA-VPDYRDT-GASRGYTSTESSERKKRKVKVKKKTSSWQTEGRHAPKMCWTVSKHCCYEEVQKGYECKDYYAYKYARCHPVIEFDEVCGDIKETPAEHPRPKGRVKYEESVLKNYDANYGPHVAGYPKDGESEYYRTDTIPSKPHGVTENAYPAPQAYESGSGGGTYKTENKQSANETEIIVESSEVGETGSQGYQASGAEQPYDGETAGNSAENAVEQNMSKSSEEDAAGGSYASGSAEL 347          
BLAST of Gchil2065.t1 vs. uniprot
Match: A0A2V3IVJ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ2_9FLOR)

HSP 1 Score: 112 bits (280), Expect = 8.500e-26
Identity = 54/129 (41.86%), Postives = 69/129 (53.49%), Query Frame = 0
Query:  147 NHPKVCWTMSKRCCYEEVQKGYECKDFYAHKYTRCHPVIEYEAVCGKIEERPAHHPRPKGRVKYEETVLKNYDARYGPHVTGYPENGESEYYKVDTIPVKPRGVSGTPV-----SAPQSYQSKSGSTTN 270
            N   +CW  +K+CCY E   GY+CKD+YAHKY+RC+   +    C + EE      RPK RV  +E   + YD  YGPHV GYP  GES +Y    +P KP GV   P        P+ +   SG  TN
Sbjct:   65 NTNNMCWMETKKCCYLEEADGYKCKDYYAHKYSRCYAKFKTVRKCDRAEEH-GKPERPKPRVNRKECTKQYYDKNYGPHVEGYPSGGESVWYDAKDLPKKPYGVQSEPQYQIPSQIPEEFSKNSGYNTN 192          
BLAST of Gchil2065.t1 vs. uniprot
Match: A0A2V3IL68_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL68_9FLOR)

HSP 1 Score: 112 bits (279), Expect = 2.230e-25
Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = 0
Query:  151 VCWTMSKRCCYEEVQKGYECKDFYAHKYTRCHPVIEYEAVCGKIEERPAHHPRPKGRVKYEETVLKNYDARYGPHVTGYPENGESEYYKVDTIPVKPRGVSGTPVSAPQSYQSK 264
            +CW  +K+CCY E   GYECKD+YAHKY RC+   +Y   C K E       +PK RV+  +    +YD  YGPHV GYP + ESE+Y  + +P KP GV G P      Y+++
Sbjct:   91 MCWMETKKCCYIEKADGYECKDYYAHKYARCYAKFKYVRRCDKAESH-GKPEKPKPRVEKSKCQKVHYDQNYGPHVEGYPTDAESEWYDSEELPKKPYGVKGEPQYPAPRYEAE 203          
The following BLAST results are available for this feature:
BLAST of Gchil2065.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYA0_9FLOR9.460e-8849.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVJ2_9FLOR8.500e-2641.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL68_9FLOR2.230e-2543.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..386
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..386
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000019_piloncontigtig00000019_pilon:377459..378619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2065.t1Gchil2065.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000019_pilon 377459..378619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2065.t1 ID=Gchil2065.t1|Name=Gchil2065.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=387bp
MMICYSSVTIALCSMILPLVGGLPFSSIGLGVGKASQGDVFGTSNVYGSG
NFASIGTGASGKGVSGSTSVISPVQATDKDVSLPIGSPEAAIDIELSSIL
NRGLQAAVPDYRDTSGSSEKSYATGASENKTSHPNTRDSSEKPGIANHPK
VCWTMSKRCCYEEVQKGYECKDFYAHKYTRCHPVIEYEAVCGKIEERPAH
HPRPKGRVKYEETVLKNYDARYGPHVTGYPENGESEYYKVDTIPVKPRGV
SGTPVSAPQSYQSKSGSTTNEAYMAEEDGEDIVSIVPYETKSNRDQQYGA
LGDSKGHEKKAANLIPKSTENATAGAEGSYEVKPQPTSVQSLSKTSAANA
DTGSGGNGPGVSEQSLETYNVGTAQGGNGPSYRILK*
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