Gchil2055.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2055.t1
Unique NameGchil2055.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length224
Homology
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A2V3IVF7_9FLOR (Protein RER1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVF7_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 1.250e-82
Identity = 146/220 (66.36%), Postives = 157/220 (71.36%), Query Frame = 0
Query:    4 LDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVTRPHPQPSPLPSSAPPRAVPVPTVPINKTPALSQ 223
            LDR+ Q LLDR+AP+KL+RWLAL  LL +F+                       FILFLQPKDRASL+ARAA  S DD+           P LPT D DEFRPFVRRLPEFKFWYSTTYAT LAF ATFF VFDVPVFWPVLLFYFV+LFVATMRRQW DMK LKYVPWDIGTKKVYKSDPKRVSVTRP       P + P RA PVPTVP+ KT ALSQ
Sbjct:  184 LDRQTQILLDRIAPYKLHRWLALTALLCIFMLRMFLLEGFYIVTYVLFIFILNQFILFLQPKDRASLVARAA--SPDDS----------GPVLPTADDDEFRPFVRRLPEFKFWYSTTYATFLAFCATFFKVFDVPVFWPVLLFYFVLLFVATMRRQWYDMKRLKYVPWDIGTKKVYKSDPKRVSVTRPQQHQPSAPPTNPARAAPVPTVPVKKTAALSQ 391          
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A7S1TKE0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TKE0_9RHOD)

HSP 1 Score: 152 bits (383), Expect = 1.590e-42
Identity = 87/193 (45.08%), Postives = 109/193 (56.48%), Query Frame = 0
Query:    6 RRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVTRPHPQPSP 198
            RR Q LLDR  P  ++RW+A V +L  F+                       F+LF+QPKDR++L+A                     P+LP  D+D+FRPF R LPEFKFWYS   A+LLA   TF  V D+PV+WPVLLFYF++LFVATMRRQ  DMK  KYVPWD+G K+    +P  V+  RP P   P
Sbjct:   41 RREQVLLDRWTPKMVHRWMAFVAVLVCFMTRVLIVKGFYVVVYVFFIFLLNQFLLFVQPKDRSALVADG-------------------PSLPLSDSDDFRPFYRSLPEFKFWYSAFRASLLALTCTFVPVLDIPVYWPVLLFYFIILFVATMRRQLQDMKRFKYVPWDLGKKRPNGPNPMVVNSNRPKPTSKP 214          
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A5J4YVP6_PORPP (Protein RER1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVP6_PORPP)

HSP 1 Score: 142 bits (359), Expect = 1.200e-37
Identity = 87/190 (45.79%), Postives = 102/190 (53.68%), Query Frame = 0
Query:    1 MAALDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVT 190
            M    RR    LD++ P  LYRWLA VV+L  F                        FILFLQPKDR++L   +A  S +             PT    D D +RPF RRLPEFKFW+S T ATLLA   TF    DVPVFWP+L+ Y V+LF ATMR+Q  DMK  KYVPWDIG K+ Y    K V+ T
Sbjct:  121 MDQASRRYSVFLDQITPLILYRWLAFVVVLLSFALRMFMIHGFYIVAYVLFIFLLNQFILFLQPKDRSALGDNSAADSDEPGL----------PTTSVVDFDTYRPFYRRLPEFKFWHSATRATLLAIVCTFVPFLDVPVFWPILVVYSVVLFFATMRKQLADMKRFKYVPWDIGKKQKYSGTSKSVAST 300          
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A397I5J1_9GLOM (Protein RER1 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397I5J1_9GLOM)

HSP 1 Score: 137 bits (345), Expect = 5.290e-37
Identity = 101/175 (57.71%), Postives = 124/175 (70.86%), Query Frame = 0
Query:    3 ALDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTK 177
            +LDRR Q  LD V P+   RWL+ ++LLALF+XXXXXXXXXXXXXXXXXXXXXXXF+ FLQPK   SL    A  + ++            P+LPT   +EFRPF+RRLPEFKFWYS+T AT ++   TFF++FDVPVFWP+LL YF +LF  TM+RQ   M   KY+P+DIG K
Sbjct:   29 SLDRRYQKFLDTVTPYTAPRWLSTILLLALFMXXXXXXXXXXXXXXXXXXXXXXXFLAFLQPKFDPSLEMDIAESNAEE----------EGPSLPTKADEEFRPFIRRLPEFKFWYSSTKATTISMFCTFFSIFDVPVFWPILLIYFSILFAITMKRQIKHMIKYKYIPFDIGKK 193          
BLAST of Gchil2055.t1 vs. uniprot
Match: M2Y7A2_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7A2_GALSU)

HSP 1 Score: 137 bits (346), Expect = 1.310e-36
Identity = 82/188 (43.62%), Postives = 103/188 (54.79%), Query Frame = 0
Query:    1 MAALDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVS 188
            + AL  + Q  LD++ P  LYRW+    +L LFL                       FILFLQP+DR +L +  A                  PTLP   +DEFRPFVRRLPEFKFW S T AT+L   AT F + D+PVFWP+L+ YF+MLFVATMRRQ  DM    Y+P++ G +K Y S  K V+
Sbjct:    4 LVALRNKYQTFLDKLTPFILYRWVCFGNILVLFLVRIFLAQGFYIIAYVLFIYLLNLFILFLQPQDREALASSNA----------------EGPTLPVSSSDEFRPFVRRLPEFKFWLSATRATILCLFATAFRILDIPVFWPILVIYFIMLFVATMRRQIADMIQYHYLPFNFGKRK-YTSSTKFVA 174          
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A1X6P506_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P506_PORUM)

HSP 1 Score: 136 bits (342), Expect = 3.990e-36
Identity = 78/142 (54.93%), Postives = 88/142 (61.97%), Query Frame = 0
Query:   59 ILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXR--------------------APTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTKKVY 180
            +LFLQPKDRA+LLA  AVR   +A       XX                     A  LPT D DEFRPFVRRLPEF FWY  +  T LA  AT F +FD+PVFWPVL+ YF+MLF  TMRRQW DMK L+YVPWDIG K+ Y
Sbjct:   11 LLFLQPKDRATLLA--AVRGAGEAAAGAAGIXXXXXXXXXXXXXXXXXXXXXATADALPTRDTDEFRPFVRRLPEFTFWYGASVTTTLALLATAFPIFDIPVFWPVLVVYFIMLFAVTMRRQWQDMKKLRYVPWDIGQKRRY 150          
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A5J5AE39_9ASTE (Protein RER1 n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5AE39_9ASTE)

HSP 1 Score: 133 bits (334), Expect = 1.380e-35
Identity = 81/176 (46.02%), Postives = 103/176 (58.52%), Query Frame = 0
Query:    3 ALDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTKK 178
            A+ RR QHLLD+  PH L RW+A  V+   +             XXX        FILFL P+          ++ + D            PTLPT  +DEFRPFVRRLPEFKFWYS T +   AF  TFF+VFDVPVFWP+LLFY+++LFV+TM+RQ + M   KYVP+ +G K+
Sbjct:    7 AIWRRYQHLLDKSIPHVLRRWIAFSVIAFTYALRVYLVQGYYVIXXXLGIFILQLFILFLSPRFDPE------IKELADG-----------PTLPTRGSDEFRPFVRRLPEFKFWYSITTSFCFAFMLTFFSVFDVPVFWPILLFYWLVLFVSTMKRQIMHMIKYKYVPFSVGKKR 165          
BLAST of Gchil2055.t1 vs. uniprot
Match: UPI00125E9E00 (protein RER1A-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E9E00)

HSP 1 Score: 133 bits (334), Expect = 3.290e-35
Identity = 77/172 (44.77%), Postives = 94/172 (54.65%), Query Frame = 0
Query:    4 LDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIG 175
            L RR QHLLD+  PH LYRW+A + L  +++                        I FL P+             +D             PTLPT ++DEFRPFVRRLPEFKFWYS T A  +A   TFFNVFDVPVFWP+LLFY+++LF  TMRRQ L M   KY+P+  G
Sbjct:   38 LSRRYQHLLDKTLPHFLYRWIAFLALALVYVVRVFLLQGFYVVSYALGIYILNLLIGFLSPQ-------------VDPEHDFS-----NGPTLPTRESDEFRPFVRRLPEFKFWYSITKAFCIAMVMTFFNVFDVPVFWPILLFYWIVLFTLTMRRQILHMMKYKYLPFSFG 191          
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A5B7ATI2_DAVIN (Protein RER1 n=3 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7ATI2_DAVIN)

HSP 1 Score: 132 bits (333), Expect = 3.420e-35
Identity = 80/192 (41.67%), Postives = 103/192 (53.65%), Query Frame = 0
Query:    3 ALDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGT-----KKVYKSDPKRVSV 189
            A+ RR QHLLD+  PH L RW++  V+  ++                        FILFL P+    +   A                   PTLPT  +DEFRPFVRRLPEFKFWYS T A   AF  TFF+ FDVPVFWP+LLFY+++LFV+TM+RQ + M   KYVP  +G      KKV  +D   +++
Sbjct:   25 AVSRRYQHLLDKSTPHVLRRWISFSVIAFIYALRVYLVQGYYIITYGLGIYILQLFILFLSPRFDPEIQEHAD-----------------GPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFFFAFVLTFFSAFDVPVFWPILLFYWLVLFVSTMKRQIMHMIKYKYVPLSLGKQRYTGKKVTSTDETNIAL 199          
BLAST of Gchil2055.t1 vs. uniprot
Match: A0A5P1EW78_ASPOF (Protein RER1 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EW78_ASPOF)

HSP 1 Score: 132 bits (333), Expect = 4.390e-35
Identity = 76/181 (41.99%), Postives = 100/181 (55.25%), Query Frame = 0
Query:    1 MAALDRRMQHLLDRVAPHKLYRWLALVVLLALFLXXXXXXXXXXXXXXXXXXXXXXXFILFLQPKDRASLLARAAVRSIDDAXXXXXXXXXRAPTLPTDDADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFVMLFVATMRRQWLDMKHLKYVPWDIGTKKVYK 181
            MA + +R QH+LD+  PH L RWL   ++  +++                       FI FL P+          ++ + D            PTLPT  +DEFRPFVRRLPEFKFWYS T A  +AF  TFF+ FDVPVFWP+L+FY+ +LFVATM+RQ L M   KYVP+  G ++  K
Sbjct:   34 MAVISQRYQHVLDKSTPHVLRRWLGFAIVALIYIIRVATIEGFYVVSYALGIYVLNLFIAFLSPQ------VDPEIQGLVDG---------EGPTLPTKSSDEFRPFVRRLPEFKFWYSITKAFCIAFILTFFDAFDVPVFWPILVFYWFVLFVATMKRQILHMIKYKYVPFSTGKQRYGK 199          
The following BLAST results are available for this feature:
BLAST of Gchil2055.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVF7_9FLOR1.250e-8266.36Protein RER1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A7S1TKE0_9RHOD1.590e-4245.08Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YVP6_PORPP1.200e-3745.79Protein RER1B n=1 Tax=Porphyridium purpureum TaxID... [more]
A0A397I5J1_9GLOM5.290e-3757.71Protein RER1 n=1 Tax=Diversispora epigaea TaxID=13... [more]
M2Y7A2_GALSU1.310e-3643.62Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A1X6P506_PORUM3.990e-3654.93Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J5AE39_9ASTE1.380e-3546.02Protein RER1 n=1 Tax=Nyssa sinensis TaxID=561372 R... [more]
UPI00125E9E003.290e-3544.77protein RER1A-like n=2 Tax=Ipomoea TaxID=4119 RepI... [more]
A0A5B7ATI2_DAVIN3.420e-3541.67Protein RER1 n=3 Tax=Davidia involucrata TaxID=169... [more]
A0A5P1EW78_ASPOF4.390e-3541.99Protein RER1 n=1 Tax=Asparagus officinalis TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PIRSFPIRSF016013AtER_Rer1pcoord: 1..190
e-value: 2.3E-58
score: 195.0
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 3..180
e-value: 1.0E-59
score: 201.2
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 3..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..139
NoneNo IPR availableTMHMMTMhelixcoord: 43..62
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 140..157
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000019_piloncontigtig00000019_pilon:320589..321260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2055.t1Gchil2055.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000019_pilon 320589..321260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2055.t1 ID=Gchil2055.t1|Name=Gchil2055.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=224bp
MAALDRRMQHLLDRVAPHKLYRWLALVVLLALFLLRTFLLEGFYIVIYVL
FIFILNQFILFLQPKDRASLLARAAVRSIDDAADDDDDDQRRAPTLPTDD
ADEFRPFVRRLPEFKFWYSTTYATLLAFGATFFNVFDVPVFWPVLLFYFV
MLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVTRPHPQPSPLP
SSAPPRAVPVPTVPINKTPALSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1