Gchil2013.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2013.t1
Unique Name	Gchil2013.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	72

Homology

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BLAST of Gchil2013.t1 vs. uniprot
Match: A0A2V3J4K2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4K2_9FLOR)

HSP 1 Score: 60.1 bits (144), Expect = 3.060e-10
Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0

Query:    1 MGSTSDPRSSPSAELQLERDQRLLFLSLLSIFLISVLSVVIAWIRYGKEVIEALTA 56
            +G+  +P SSPS+E+Q E+DQ    + LLS+FL+S+L VV+AW+ YGK+V EAL A
Sbjct:   18 LGNGGEPGSSPSSEIQFEKDQARSLVLLLSLFLVSLLGVVLAWMHYGKDVTEALLA 73

The following BLAST results are available for this feature:

BLAST of Gchil2013.t1 vs. uniprot

BLAST of Gchil2013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J4K2_9FLOR	3.060e-10	53.57	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 23..44
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..22
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 45..71
None	No IPR available	TMHMM	TMhelix		coord: 23..45

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004439_pilon	contig	tig00004439_pilon:1705716..1706030 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2013.t1	Gchil2013.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004439_pilon 1705716..1706030 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2013.t1 ID=Gchil2013.t1|Name=Gchil2013.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=72bp
MGSTSDPRSSPSAELQLERDQRLLFLSLLSIFLISVLSVVIAWIRYGKEV
IEALTADSNQRPSKSYRHKHE*