Gchil1811.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1811.t1
Unique NameGchil1811.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length187
Homology
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BLAST of Gchil1811.t1 vs. uniprot
Match: A0A2V3IH48_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH48_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 2.010e-73
Identity = 112/155 (72.26%), Postives = 131/155 (84.52%), Query Frame = 0 
Query:    1 MSDRHRVTTNRCLGHVATALIAPDGGNPNLVAKAMATLWYILILPDAKARFNRQVYRKRLPWYAPSRVFGLLLSAANIATIPLSWALLFAGKRNASRIACFSVLLNPPTISLTWILLKELSSSTAKKTYRIGCASVDAVTKPFKSKKSLQPEASS 155
            MSD H  TT RCLG VAT LIA DGG  N+VAK +ATLWYILILPDA+ARF+RQVYRKRLPWYAP RVFGL+LSAANIAT+PLSW LLFAG+RNASR+ACFSVLLNPPTI+L+ ++++ELSS+  +K YRIG  S D +TKPFKSK+S   + SS
Sbjct:    1 MSD-HSSTTRRCLGEVATVLIAQDGGRANIVAKTLATLWYILILPDAQARFHRQVYRKRLPWYAPGRVFGLMLSAANIATMPLSWVLLFAGRRNASRVACFSVLLNPPTITLSSLIVRELSSALVRKAYRIGLTSADVITKPFKSKESSNTKTSS 154
The following BLAST results are available for this feature:
BLAST of Gchil1811.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IH48_9FLOR2.010e-7372.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..89
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 95..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:2636360..2636920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1811.t1Gchil1811.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 2636360..2636920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1811.t1 ID=Gchil1811.t1|Name=Gchil1811.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=187bp
MSDRHRVTTNRCLGHVATALIAPDGGNPNLVAKAMATLWYILILPDAKAR
FNRQVYRKRLPWYAPSRVFGLLLSAANIATIPLSWALLFAGKRNASRIAC
FSVLLNPPTISLTWILLKELSSSTAKKTYRIGCASVDAVTKPFKSKKSLQ
PEASSTPASESATTKTSSSASEKDAPEAKTTSETKR*
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