Gchil1783.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1783.t2
Unique NameGchil1783.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1015
Homology
BLAST of Gchil1783.t2 vs. uniprot
Match: A0A2V3J5E2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5E2_9FLOR)

HSP 1 Score: 635 bits (1639), Expect = 5.700e-209
Identity = 392/1015 (38.62%), Postives = 588/1015 (57.93%), Query Frame = 0
Query:   21 VNPVSIVSTHQIPKVFRPIPVTNKVLISFDEGEDSADSTEFSGRRAVNCPISFSQASGLSFQNDNTATVSSTTMDEVLTNTKARKKSNSGSL---LNQFEKNNKDADNPQRLEHKTCGDYGEKEHKQNQARGKDYCNHDSLRLSAQGTEDSCDGVLYGKKMNASRASFLCIEDIDSIPPASIRSIESPAIKLRPDSPRCMTVSSSQNANSFLSQSLHIRSSTNERSNDSTASGSHSSIGSSKEDDPTVSTSLPSFQSS---DSYSFQDRAQCSAXXXXXXXXSVRSDDVACITVEPKQKS-----------DRRRMVREQKRVLRLFDRRQHSTDIRDITDNPWFQA---MAADSKLEEYQVPSQTQSYLRNIEHKGRRTKLSKLGRSLKSQGKRKKLEQEDTTDPTCHGKETVSMSVSSSSSLLVAKYSTEITIEELRHALRRALSGKRSLDEVLECMMRVYSRPPDNFFQLLYKYFSCGKTIESSMKWITEELRVLQEDISDGQLSKGCEAYIILSRIYREILLQIFTSGPSTVKKAFLHNKKVRSSLIRFFRKDIPQGRLELKSWAKTSVAVFRILSSLMSEHASDVVLFLSSKDGLLSSLISKYICFPEVVSFVSKLCAADALSESSDCFLRYGPPNADGILLLAKENIVDTLAHAFIDSCNSRSGNSSDLT-LEIQRNSLQCLKEISFKAVTMPKFGKTNCSMNPKQIKMLNTALETIPLYSATNHLQAGIEYSLKRLFESSDANKTHSNVFESNYPLSRILSLSSDLLEAVLVASESKKFAVRRTIGMVSTKNLEWVLLSKLDDLCGLLDRKGATRILSTTRLFIIQLLKCLFASNQNNIWDHLYKKKVPELLLTVIDENEFPTMIHKAVIECFESSLRRKDAVLLHKQWIENLGKHHGWTNEMHRIAENQKSRGIDAQHCRSQIQCTYVQITTTLMDIANSEYNMNLDSFFATHGVNLPCMGKLEIEIARIRDEHSKPCGGPKPDAKTVSVLACAEYLAARLDDVNAV 1014
            V P   V+    PK+ +PIP+TNKV ISFD+ +        S  +  N  ISFS+ S +S   D T  +            ++ K+++ GS    +  F + N        +  K     G+ +H          C   ++R   +G   S    L  +K+++       I DIDSIPPASI+SI +P  +  P       ++ +      LS    I  S   R    T S S   + S +E D    T L +  +    +  + +   + +           R   V   + +P Q +            R++  +E KR L +FDR++ S       +NPWFQA   +A ++ LE    PS + S ++    K +RTKLSK+ R+ K  GK K L +  ++  T     ++  S S++SS+    +S E+T E L + ++  +  K++LDEVL CMM VYSRP ++    LYKYF+ G T+ESS++WITEELR  +E+ S G  S+  ++Y ++SRIYR I+L +F SG   VK+AFL+N K+RS+L+ FF KD P+ +  L+SW  TS  +FR+ +S M +H+SD+ +++S+K GLL S++ K++  PE  SF++KLCAADALSES+   LRYG PN +GILLL KE ++D L   F++SC    G  S +T L+ Q NSL CLKE+S +A T+PKFGK NCS N K IK LNT L+++ LYS  + ++  I+ +L  +  S + ++   +  E N PL+RILSL +DLL AVL+ASESK  A+RRT+G +  ++++ VLLSK+D LC ++ R  A  + +++RL I++ L+CLFAS++   WD L   +V E LL V++EN   TM HKAV+EC E+S+++K+A +LHKQW++ LG H GW NEM R+A+  +    + +  RSQ+ C Y++IT+ L++IA S +  +L   F  +G++L  MG LE  +  IR+   K CGGP+P+A+TVSVLA  E LAARL+DVNAV
Sbjct:   54 VKPFGFVAAVHSPKILKPIPITNKVFISFDDDDVLGAEHMGSIEQLTNPTISFSETSRVSSHYDETNPIQP----------ESEKRNSIGSQQMPVPTFSEQNLVGKRQASINKKLSLGAGDFDHSAEHTNAG--CELINIRSQEKGISQSTG--LSARKLSSG------IRDIDSIPPASIQSIVTPISRRTPIPINANELNETDKGFDPLSDEECIAVS---REPTPTKSLSPKRLNSCRELDTDHRTPLSTTHTHFLHNEGTHEPSMRSTTEVAGCHQNRSRDSTVPLTSTKPHQSTADGPPTEQKTKGRKQRPKEHKRTLYIFDRKKRSEGSYGSGENPWFQATPTLAKNTVLETDAGPSVSSSDVQKPALKEKRTKLSKISRAFKGYGKSKHLHRAPSSSDTS----SIPSSASNASSVEPLTFSVEVTDERLGNIIQDVVHRKKALDEVLNCMMHVYSRPAEDTLHHLYKYFATGTTMESSIRWITEELRTYEEEDSTGIRSEELKSYRMISRIYRAIVLHVFASGAGHVKRAFLNNTKMRSALLDFFEKDAPRAKSALRSWTDTSAGIFRLFNSFMVDHSSDLTVYISNKPGLLHSIVRKHVSIPEASSFIAKLCAADALSESTQNDLRYGAPNTNGILLLVKEKVLDALIEIFVESCTDFPGQHSHMTSLQRQSNSLWCLKELSIRAATIPKFGKNNCSFNGKLIKRLNTGLDSLTLYSYPDSMRTAIDQALAIISGSEEDDERPLSCHERNNPLTRILSLFADLLGAVLIASESKNIAIRRTVGRIDVRHVQHVLLSKVDALCEIVHRDSANGLTASSRLSILRALRCLFASSERKAWDTLSASRVSEHLLDVLEENRLSTMTHKAVLECVEASMKQKEARILHKQWVQALGNHQGWLNEMKRLAKKLEVEESETEQVRSQLSCVYIEITSILINIAKSVHCKSLSEVFEENGMSLSFMGNLESAVLEIREAQRKSCGGPRPEAQTVSVLASVESLAARLNDVNAV 1041          
BLAST of Gchil1783.t2 vs. uniprot
Match: R7QGC5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC5_CHOCR)

HSP 1 Score: 284 bits (727), Expect = 2.010e-79
Identity = 197/603 (32.67%), Postives = 312/603 (51.74%), Query Frame = 0
Query:  428 KYSTEITIEE------LRHALRRALSGKRSLDEVLECMMRVYSRPPDNFFQLLYKYFSCGKTIESSMKWITEELRVLQEDISDGQLS-KGCEAYIILSRIYREILLQIFTSGPSTVKKAFLHNKKVRSSLIRFFRKDIPQGRLELKSWAKTSVAVFRILSSLMSEHASDVVLFLSSKDGLLSSLISKYICFPEVVSFVSKLCAADALSESSDCFLRYGPPNADGILLLAKENIVDTLAHAFIDSCN-SRSGNSSDLTLEIQRNSLQCLKEISFKAVTMPKFGKTNCSMNPKQIKMLNTALETIPLYS----ATNHLQAGIEYSLKRLFESSDANKTHSNVFESNYPLSRILSLSSDLLEAVLVASESKKFAVRRTIGMVSTKNLEWVLLSKLDDLCGLLDRKGATRILSTTRLFIIQLLKCLFASNQNNIWDHLYKKKVPELLLTVIDENEFPTMIHKAVIECFESSLRRKDAVLLHKQWIENLGKHHGWTNEMHRIAENQ----KSRGIDAQHCRSQIQCTYVQITTTLMDIANSEYNMNLDSFFATHGVNLPCMGKLEIEIARIRDEHSKPCGGPKPDAKTVSVLACAEYLAARLDDVNAV 1014
            K ++++T+E       L   LR+ALS KR L++VLE  + +  RPP++     YKY S    +E  +  I      L    +    S K   A I   R+Y E+L   + +GPS ++KA L   K ++ ++ F  ++        ++++     + ++L+++++E  SDV  FLS   G L S +   I   E   F+ +LCAA+ALS++    LRYG PNA GI LL KE I D L   F +SC  S +   S    ++Q  S+ CL E+S ++V +PKF K NCS + K IK LN AL+ I L+     A+  L+A +  + K    S  A +      + N  +  +LS  ++LL+ V  A +SK    RRT+G ++TK+LE VLLS++  LC LLD+           L I+++ + LF S  ++    L    VPE +L  + +N+  +++H  V+EC   SLRR+++  LH +W+  L K  G   EM  + E +    KS   DA    S  + T V +   L   + +         F +       +GK+E+ + ++ +     CGGPKP+   VSVLA A+ LAA+++DV+AV
Sbjct:  147 KTTSDVTVESIVSSAVLEKDLRKALSAKRRLEDVLERALVLRERPPEDLCSQFYKYLSSSTAVERGVTII------LNGGFTASAASMKSSFAAIPKHRVYSELLSSAYVNGPSRLRKAVLSQTKAKAQILTFLTQNAGDLGSRTETYSFKVRCLVKVLAAILAESPSDVTDFLSGSQGCLHSFVRYQIRVAEAADFICQLCAANALSDAPGDGLRYGAPNAAGIALLRKEGISDLLVRVFEESCETSVAETDSSARWQLQVMSMGCLVELSKRSVVVPKFSKNNCSYSNKHIKSLNAALQNIDLFQNVERASRLLRAALSCAEKTGRGSGQAEQGK----DCNAGVC-VLSSVAELLDMVSSAGDSKSVVTRRTVGKINTKDLERVLLSQIGVLCRLLDQGHEVEGRGRLSLEIVKVFRSLFESRSDDTRIALVDAGVPECVLRAVRKNKLCSILHGCVVECMAVSLRREESGRLHHEWLRALNKV-GMLEEMASVLEGKCGTDKSEQEDAW---STYRSTLVDLGFVLCMFSQNLTRAAFRRLFESEQQYQTFIGKIEVGLGKVANSREGACGGPKPEGAVVSVLANADALAAKINDVDAV 734          
The following BLAST results are available for this feature:
BLAST of Gchil1783.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5E2_9FLOR5.700e-20938.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGC5_CHOCR2.010e-7932.67Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:2421960..2425004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1783.t2Gchil1783.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 2421960..2425004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1783.t2 ID=Gchil1783.t2|Name=Gchil1783.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1015bp
MPITNKMVQPELDTITEPNRVNPVSIVSTHQIPKVFRPIPVTNKVLISFD
EGEDSADSTEFSGRRAVNCPISFSQASGLSFQNDNTATVSSTTMDEVLTN
TKARKKSNSGSLLNQFEKNNKDADNPQRLEHKTCGDYGEKEHKQNQARGK
DYCNHDSLRLSAQGTEDSCDGVLYGKKMNASRASFLCIEDIDSIPPASIR
SIESPAIKLRPDSPRCMTVSSSQNANSFLSQSLHIRSSTNERSNDSTASG
SHSSIGSSKEDDPTVSTSLPSFQSSDSYSFQDRAQCSASASASSSSSVRS
DDVACITVEPKQKSDRRRMVREQKRVLRLFDRRQHSTDIRDITDNPWFQA
MAADSKLEEYQVPSQTQSYLRNIEHKGRRTKLSKLGRSLKSQGKRKKLEQ
EDTTDPTCHGKETVSMSVSSSSSLLVAKYSTEITIEELRHALRRALSGKR
SLDEVLECMMRVYSRPPDNFFQLLYKYFSCGKTIESSMKWITEELRVLQE
DISDGQLSKGCEAYIILSRIYREILLQIFTSGPSTVKKAFLHNKKVRSSL
IRFFRKDIPQGRLELKSWAKTSVAVFRILSSLMSEHASDVVLFLSSKDGL
LSSLISKYICFPEVVSFVSKLCAADALSESSDCFLRYGPPNADGILLLAK
ENIVDTLAHAFIDSCNSRSGNSSDLTLEIQRNSLQCLKEISFKAVTMPKF
GKTNCSMNPKQIKMLNTALETIPLYSATNHLQAGIEYSLKRLFESSDANK
THSNVFESNYPLSRILSLSSDLLEAVLVASESKKFAVRRTIGMVSTKNLE
WVLLSKLDDLCGLLDRKGATRILSTTRLFIIQLLKCLFASNQNNIWDHLY
KKKVPELLLTVIDENEFPTMIHKAVIECFESSLRRKDAVLLHKQWIENLG
KHHGWTNEMHRIAENQKSRGIDAQHCRSQIQCTYVQITTTLMDIANSEYN
MNLDSFFATHGVNLPCMGKLEIEIARIRDEHSKPCGGPKPDAKTVSVLAC
AEYLAARLDDVNAV*
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