Gchil1752.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1752.t1
Unique NameGchil1752.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length251
Homology
BLAST of Gchil1752.t1 vs. uniprot
Match: A0A2V3J599_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J599_9FLOR)

HSP 1 Score: 145 bits (366), Expect = 5.780e-39
Identity = 91/257 (35.41%), Postives = 145/257 (56.42%), Query Frame = 0
Query:    1 MENNSSTRGCKTKAFSTAGVLVLVGGADLILYVGGILATRKL--------SPWIVAVVVNMIFGGVFAVGYIFVRNGPAVFCISSRVFAFVWIVLGNFAVVWYMAYMIAMEGDVVAGVLPYSDGRLDSVVPMRTERERKKSEL---IRVFAWLAVVAMGFSCVRAALKESLAEGWKTMA--RSAWASWMAADCATGVVMVAVYMAAREGA-SVVGVAWLAALLLLGNMATFAYLAAMASRALATDAPFSHVMLSTSR 243
            M++ ++T     K +S A +L +   A L  Y    L T  L        S W V +  +  FG VFAV Y+FVRNGP+V CI +++FAF+W  + NFA++WY+AYMI +  D+ + ++PYS    +  VPMRT+R R+ +++   I  F +  +V +  + +R    ES +  W  +   ++ W ++  AD   G++  A+Y+  REG  S   V W  ALL+LGN  T  Y+  MA +A++ D P +HV+LS+ +
Sbjct:    1 MDSTTATSPSLIKTYSIAALLFIASFAVLFAYTSAALETSLLNAPQDISQSGWAVVIFFDASFGAVFAVYYLFVRNGPSVACIPAKLFAFLWPFISNFALLWYVAYMILLHKDLRSALIPYSTAEANGQVPMRTQRNRRTAQIVASIASFLFFVIVVLDINAMR---YESFSTAWTKLLSNQNKWITFTYADSLAGLLFTAIYIIEREGGPSPTSVLWAVALLVLGNAVTCVYVFLMALQAISEDVPITHVLLSSRK 254          
BLAST of Gchil1752.t1 vs. uniprot
Match: A0A2V3IJ70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ70_9FLOR)

HSP 1 Score: 115 bits (287), Expect = 2.760e-27
Identity = 81/256 (31.64%), Postives = 136/256 (53.12%), Query Frame = 0
Query:    1 MENNSSTRGCKTKAFSTAGVLVLVGGADLILYVGGILATRKL-----------SPWIVAVVVNMIFGGVFAVGYIFVRNGPAVFCISSRVFAFVWIVLGNFAVVWYMAYMIAMEGDVVAGVLPYSDGRLDSV-VPMRTERERKKSELIRVFAWLAVVAMGFSCVRAALKESLAEGWKTMARSAWASWMAADCATGVVMVAVYMAAREG-ASVVGVAWLAALLLLGNMATFAYLAAMASRALATDAPFSHVMLSTSR 243
            ME+ ++     T+A+  A  L  VG A   L++  +   RK            SPW ++ + +   G  FA  Y+F+R+GP VFC+S++VFA V+  +GNFA++WY+AY+I    DV  G+LP +     +V + MR+   +K  + I V  +  ++     C  A+ ++SL EG++ +    WA +   D  TG++   V++  REG  + +   W+  L+  GN  T  Y+  +A +A + D  FS V+LS S+
Sbjct:    1 MESTTAANARATQAYIFAAFLTTVGVA---LFMSLVQTIRKSPLSEGISGIGESPWALSALADYFVGACFAALYVFLRDGPPVFCLSNKVFAVVFPFVGNFALLWYVAYLIVKAKDVTRGLLPQTVETPGNVEIDMRSSSTQKHPKTIGVAFFALLLWFAAVCFWASQRQSLQEGYRVLKMVKWAGFTFIDNLTGILFTVVFIIVREGEVNCITSLWILGLVFFGNGPTCLYVIHVAQQAFSRDVSFSRVLLSRSK 253          
The following BLAST results are available for this feature:
BLAST of Gchil1752.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J599_9FLOR5.780e-3935.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJ70_9FLOR2.760e-2731.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..250
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 157..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 171..193
NoneNo IPR availableTMHMMTMhelixcoord: 200..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:2127082..2127834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1752.t1Gchil1752.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 2127082..2127834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1752.t1 ID=Gchil1752.t1|Name=Gchil1752.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=251bp
MENNSSTRGCKTKAFSTAGVLVLVGGADLILYVGGILATRKLSPWIVAVV
VNMIFGGVFAVGYIFVRNGPAVFCISSRVFAFVWIVLGNFAVVWYMAYMI
AMEGDVVAGVLPYSDGRLDSVVPMRTERERKKSELIRVFAWLAVVAMGFS
CVRAALKESLAEGWKTMARSAWASWMAADCATGVVMVAVYMAAREGASVV
GVAWLAALLLLGNMATFAYLAAMASRALATDAPFSHVMLSTSRAQRDCAT
*
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