Gchil1740.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1740.t1
Unique Name	Gchil1740.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	658

Homology

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BLAST of Gchil1740.t1 vs. uniprot
Match: R7Q8N3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8N3_CHOCR)

HSP 1 Score: 294 bits (752), Expect = 2.910e-89
Identity = 152/379 (40.11%), Postives = 239/379 (63.06%), Query Frame = 0

Query:  282 VDGYDTEVVLDSSDHDANPTQQNPKDITLNLRPR----LPWWRATESLASLSSNLGNREDLLKLYVMAVIRSCIRESWSADALKRCFENDPSSSRGKAFLAISSSLLVMERARHMGQCHVKWRPELMQELLQRRVIEWSRVQKHVSFDHFAGCDVCLGQREATIRLWLRGDRYDPSDFWPGSSRVEVLTSEEREKDVVSVAVELSGGTKNERFVQISEPA--KKGDVEFWVDPQCLRKCLLFHELVHATAIIAQDLRILIEDELRDGVIHLDMRNRIPGDEKLGVSERLERYLVQAVSESRDFLKRRTKHLMEIISLGDIYFSAIEEELIDSGN-PEGRRTPKTSQIYDPPIVLNDEKYKDRIDRIVSLTQQRGLTASF 653
            +D  D + +L  ++   N  Q+   D T    PR    LPWWR+  S  S         D+L+ Y++ +IRSC+R SW+A+ L+  +E +PSS RG AFLA+SSSLL+M RARHMGQC   W  +L+QELLQRR +EW+ ++    F HF GC+ CL  R AT  L L+G +YD SDFWP S R+++L S E +   +++AVEL+ G++        +P    +G+VEFWVD QCLRKCL+FHELVH+T+I+ +++  L+EDEL+DGV+ +    ++P +E   + + ++ +LV  +  ++ FL+++ +H  ++  +G+ YFSA++E +  S   P+   T  ++++YD P+ L  E+Y  R+  + SLT+ +  + SF
Sbjct:   67 LDEEDNQALLARNNSTEND-QRGEVDGTAAAEPRPSAQLPWWRSVGSRLSRPMRRSKDTDVLRGYILTLIRSCLRPSWNAEKLRESYELNPSSIRGSAFLAVSSSLLIMHRARHMGQCRTMWHTQLLQELLQRRELEWTAIETDPCFQHFLGCEACLAHRPATRCLRLKGVKYDSSDFWPMSCRLDILASTEAD-GALTLAVELAPGSRP------GQPTIGDEGEVEFWVDEQCLRKCLVFHELVHSTSILTEEVMCLVEDELQDGVVSVRKAQQLP-EEGTSLVDLVQCHLVDVLCRNKHFLEKQIQHFADMTHIGEAYFSAVDEGIPGSHQEPKDAETNSSARVYDAPLSLRHEQYAGRMKTLESLTEIKKPSTSF 436

The following BLAST results are available for this feature:

BLAST of Gchil1740.t1 vs. uniprot

BLAST of Gchil1740.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7Q8N3_CHOCR	2.910e-89	40.11	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..247

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004403_pilon	contig	tig00004403_pilon:2075324..2077297 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1740.t1	Gchil1740.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004403_pilon 2075324..2077297 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1740.t1 ID=Gchil1740.t1|Name=Gchil1740.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=658bp
MTGKRKRKTSDQPSGSTQTPKRQKLQPRSSSTPKALQTLTNSKVNGLALS
KTSKPSPRTKQSKNHVSVAVTKAVNEAKHLKECKGEARKDLYSSIVDLLT
EALVKDVDSANLEMTPAEVSLSVRDEPIPVHEQCPVTLQSHKLHPQKRPK
KTLSARQKSPSDVGKKGKIPKQVPSKAQKKKAGKETQASKSSKKAHPIAA
TKLKKSKPAPQSSRNSTKPEKRLAKKTASKSPVLKTPRTKLKQPPTETPV
FIEELVVDEGAALVPEPCHSSEKKKKGKKRSVDGYDTEVVLDSSDHDANP
TQQNPKDITLNLRPRLPWWRATESLASLSSNLGNREDLLKLYVMAVIRSC
IRESWSADALKRCFENDPSSSRGKAFLAISSSLLVMERARHMGQCHVKWR
PELMQELLQRRVIEWSRVQKHVSFDHFAGCDVCLGQREATIRLWLRGDRY
DPSDFWPGSSRVEVLTSEEREKDVVSVAVELSGGTKNERFVQISEPAKKG
DVEFWVDPQCLRKCLLFHELVHATAIIAQDLRILIEDELRDGVIHLDMRN
RIPGDEKLGVSERLERYLVQAVSESRDFLKRRTKHLMEIISLGDIYFSAI
EEELIDSGNPEGRRTPKTSQIYDPPIVLNDEKYKDRIDRIVSLTQQRGLT
ASFATFG*