Gchil1710.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1710.t1
Unique NameGchil1710.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length253
Homology
BLAST of Gchil1710.t1 vs. uniprot
Match: A0A2V3IVU0_9FLOR (WD repeat-containing protein 36 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVU0_9FLOR)

HSP 1 Score: 278 bits (712), Expect = 9.570e-84
Identity = 145/246 (58.94%), Postives = 181/246 (73.58%), Query Frame = 0
Query:    7 VEDQDTEADEESDTDSEMQNYEEGMRDIPTDEGKGVPLSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLETRFHDATRFMNSLDASGVDMEIRTMGGRRTLRNAALFFVERLGSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSLSAHFSGQL 252
            ++D+DT+   ESDTDSE+++     +       K +PLSE+I+TLST+PT+ WTVLSNL AIK+RNKP+EPPKK ESAPFFIPTKKS+ +EFD+N     +   D ++++            ++E W+NSTLG LL E +F  AT  +N +DASGVDMEIRTM G+ TLRNAA +F ERLGS  GFELTQAHLGVFLR HG EL+KDE+G+ LL  LL  Q+ AW+RLR LFDSVLSLSAHFSGQL
Sbjct:  753 MDDEDTQPGSESDTDSEVEDATVNEKQPTPSIEKILPLSEDIVTLSTKPTTTWTVLSNLHAIKDRNKPVEPPKKAESAPFFIPTKKSIHMEFDINQGKDKSIRDDEENENXXXXXSLHGKKEDDENWLNSTLGKLLYERQFAAATGLLNEMDASGVDMEIRTMEGQTTLRNAAEYFKERLGSPNGFELTQAHLGVFLRTHGSELSKDEQGTELLAGLLSAQQNAWERLRELFDSVLSLSAHFSGQL 998          
BLAST of Gchil1710.t1 vs. uniprot
Match: R7QPH4_CHOCR (WD40-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPH4_CHOCR)

HSP 1 Score: 199 bits (505), Expect = 8.350e-55
Identity = 106/217 (48.85%), Postives = 139/217 (64.06%), Query Frame = 0
Query:   43 PLSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMN-------GNEEGWMNSTLGNLLLETRFHDATRFMNSLDASGVDMEIRTMGGRRTLRNAALFFVERLGSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSLSAHFSGQL 252
            PLS  I TLS +P + WT LSNLQAIKERNKP+EP KK E+APFF+PT K +++EF++           G SD  + KI K   +         ++ W NS  G L+   ++  A + ++ LDASGVD+EI+T+ G  +  NAA FF ERLGS + +ELTQAHL +FL  HG  LAKDE G  LL+ L   Q  AW +LR +FD+V+SLSA FSGQ+
Sbjct:  719 PLSSNIATLSAKPLTHWTTLSNLQAIKERNKPVEPAKKPEAAPFFLPTVKGIKMEFNV-----------GDSDEVRSKIAKKAKDRKGGFGDAEDDDWANSEFGRLVAREQYGSAAKLLHRLDASGVDLEIQTLDGPNSRINAARFFQERLGSPEEYELTQAHLNLFLTTHGTWLAKDEGGPALLESLCLAQEGAWQKLRTVFDTVMSLSATFSGQV 924          
BLAST of Gchil1710.t1 vs. uniprot
Match: A0A7S2ZIH4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZIH4_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 1.810e-33
Identity = 72/210 (34.29%), Postives = 122/210 (58.10%), Query Frame = 0
Query:   42 VPLSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLETRFHDATRFMNSLDASGVDMEIRTMGGRRTLRNAALFFVERLGSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSLSAHFSGQ 251
            V ++++++TLS+ P S+W +LSNL+ ++ERNKP  P KK ESAPFF+PT   L   FD+ ++ +     + K D   G + ++           S  G L ++ ++  A      L  SG+D+++R++    +  +   +FV  L   + F+L +AH+ +FLR+HG +LA++ + +  L++L     +AW  LR  F  VL+L+AHFSGQ
Sbjct:  678 VSVADDLVTLSSVPVSQWIILSNLELVRERNKPKVPVKKSESAPFFLPTTSGLNPSFDVKSQPREIV--EQKRDRALGSLLEL-----------SEFGRLCVDGKYAAALDLAKKLGPSGIDLQLRSIEDADSQLSVLKYFVYALSLQKDFDLVEAHMDLFLRIHGSQLAEERQCAMQLRELKAAHEDAWTDLRDSFSMVLTLTAHFSGQ 874          
BLAST of Gchil1710.t1 vs. uniprot
Match: A0A7S0ZGB5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGB5_9RHOD)

HSP 1 Score: 135 bits (340), Expect = 3.980e-33
Identity = 79/212 (37.26%), Postives = 117/212 (55.19%), Query Frame = 0
Query:   43 PLSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLETRFHDAT-RFMNSLDASGVDMEIRTMGGRRTLRNAALFFVERLGSSQGFELTQAHLGVFLRVHGGELAKDEE--GSGLLQKLLDEQREAWDRLRCLFDSVLSLSAHFSGQ 251
            P++ ++ITLST P S+WTVLSNL+AI+ERNKP++P +KGE APFF+P    +   FD+    +    G+  + ++Q    K     N+E +    LG+LL++    D   RF     AS +D EIR +      +    +F+ +L S   +EL QAHL +FLRVHG E  +D+E   S   + L     ++W  L   F + L+LS H   Q
Sbjct:  319 PIAPDLITLSTVPASQWTVLSNLEAIRERNKPVKPVEKGEQAPFFLPIVSGVNPAFDVA---RGIEDGESSTKNEQENASKF----NQEAFDLGLLGSLLMKVENDDEIGRFFRMSTASQIDYEIRVLQNHDAQKRLIDYFIRKLESRIEYELVQAHLALFLRVHGTEFVEDQEHFDSQQFKTLRIAHTKSWTHLNKTFQNALALSTHLLNQ 523          
BLAST of Gchil1710.t1 vs. uniprot
Match: A0A2G8LP09_STIJA (Putative WD repeat-containing protein 36 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LP09_STIJA)

HSP 1 Score: 120 bits (302), Expect = 1.800e-27
Identity = 78/212 (36.79%), Postives = 118/212 (55.66%), Query Frame = 0
Query:   44 LSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLET-----RFHDAT-RFMNSLDASGVDMEIRTM---GGRRTLRNAALF--FVERLGSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSL 244
            +S E+ITLS  P S+W  L+NL  IK RNKP EP K  +SAPFF+P    L+   D+  E K++            K+RKV + G+    + S L  LLLE+     R ++A   +M  L+ S  D EIR++   GG   +  A      ++ L S+Q FE+ QA++ +FL++HG E+++  E   LL+ LL EQ ++W RL+  F+  + L
Sbjct:  650 ISAELITLSLLPNSRWQSLTNLDLIKTRNKPKEPLKVPKSAPFFLPVVSGLEPSLDVQKETKSS------------KVRKVAVAGSLN--LASELCQLLLESAQKEDRTYEAVLEYMTKLNPSATDTEIRSLDPIGGGSHIAMAIFMKALIDWLQSNQSFEIVQAYISLFLKIHGDEISRTSELVELLESLLGEQEKSWQRLQGQFNQTMCL 847          
BLAST of Gchil1710.t1 vs. uniprot
Match: UPI001458982C (WD repeat-containing protein 36-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458982C)

HSP 1 Score: 114 bits (286), Expect = 2.450e-25
Identity = 75/210 (35.71%), Postives = 118/210 (56.19%), Query Frame = 0
Query:   44 LSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLE----TRFHDATRFMNSLDASGVDMEIRTM----GGRRTLRNAALFFV-ERLGSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSL 244
            +S+E++TLS  P S+W  L NL+ I+ +NKP EPPK  ++APFF+PT   L+ +F   AE +A+    G S   +GK++ +           S LG +L++    T F    + M  L  SG+D+E+R++    GG   L +  L F+   L + + FEL  A+LG+FL+VHG  +A +      L+K+ + Q+EAW  ++ LF   L L
Sbjct:  688 ISDELVTLSLLPNSRWQNLLNLETIRRKNKPKEPPKAPKAAPFFLPTVAGLEFKF---AEAEAD-EDKGTSKIIKGKLKPL-----------SALGKVLMQDAEDTNFDQTLQMMKKLGPSGIDIEVRSLEPDGGGSLELMSCFLSFICYVLTTRRDFELANAYLGLFLQVHGSLVAGEPTLVKELEKVNEVQKEAWHEVQDLFTQNLCL 882          
BLAST of Gchil1710.t1 vs. uniprot
Match: A0A2N5VWM8_9BASI (Utp21 domain-containing protein n=3 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5VWM8_9BASI)

HSP 1 Score: 112 bits (281), Expect = 1.170e-24
Identity = 80/225 (35.56%), Postives = 117/225 (52.00%), Query Frame = 0
Query:   43 PLSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLET--RFHDATRFMNSLDASGVDMEIRTMGGRRTLRNAALFFVERLGSSQGFELTQAHLGVFLRVHGGELAKDEEGS--GL-------------LQKLLDEQREAWDRLRCLFDSVLSLSAHFSG 250
            PL E +ITLS  P SKW  L NL+ IK RNKP EPPK  E APFF+PT    +  FD+  ++ A+   DG + +Q  K RK+ +  N +  +  T   +  +T  +  +   ++ +L  S +D+EIR++ G   L +    F  RL   + FE+ QA + VFL+VHG  LA D+E S  GL             ++ LL  Q +   +L  L D  + +SA   G
Sbjct:  808 PLEEGLITLSCMPKSKWQTLLNLEIIKARNKPTEPPKAPERAPFFLPTVAGTEPIFDV--KSGAHEDPDGANPNQN-KKRKLDLGDNTQVEVEFTRRLIQADTDGKHEEFFEYLRNLSPSALDLEIRSLSGDEHLLSLMKAFEMRLKEGKDFEMVQAIMRVFLKVHGPRLAGDQETSIFGLPHQSDDHQKILPAIKHLLTVQEDVCAQLNRLVDYGIGVSAFVRG 1029          
BLAST of Gchil1710.t1 vs. uniprot
Match: A0A482WGK4_LAOST (Utp21 domain-containing protein (Fragment) n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482WGK4_LAOST)

HSP 1 Score: 107 bits (266), Expect = 4.750e-24
Identity = 74/209 (35.41%), Postives = 113/209 (54.07%), Query Frame = 0
Query:   44 LSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLETR----FHDATRFMNSLDASGVDMEIRTM---GGRRTLRNAALFFVERL-GSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSL 244
            L   +I+ S+   S+W  L +L  IK+RNKP E PK  ++APFF+PT  +L L+FDL    K    GDG        I+K+ +N   +   ++  G +L+E      F  A   + S+  S VD E+ ++   GG  TL    +  V+ +  S++ FEL QA+LG+FL+VHG  +A   E S +L +L   Q  +W+RL+  F   LS+
Sbjct:   83 LETHLISFSSLANSRWQNLLDLDIIKKRNKPKEAPKAPKAAPFFLPTLPALNLQFDLRDVEK----GDGA-------IKKIDLNKMIDN--HTAFGKVLVECGKSDDFSQALEKLKSMGPSAVDFEVNSLFIEGGSPTLLEMFMRLVKFVFNSNRDFELGQAYLGLFLKVHGEAVATSTELSAMLSELQAAQESSWNRLQDRFSYCLSI 278          
BLAST of Gchil1710.t1 vs. uniprot
Match: J4UCM6_TRIAS (WD-repeat protein n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J4UCM6_TRIAS)

HSP 1 Score: 110 bits (275), Expect = 7.160e-24
Identity = 73/209 (34.93%), Postives = 104/209 (49.76%), Query Frame = 0
Query:   44 LSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDG------KSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLETRFHDATRFMNSLDASGVDMEIRTMGGRRTLRNAALFFVERLGSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSLSA 246
            LSE ++TLS  P S+W  L NL+ IK RNKP EPPK  E+APFF+PT   L+  FD++A    +  G+        S   + +  + L   +E+G              +     ++ +L  S VD+EIR++     L       + RL S + FE  QA L VFL VHG  L  + E  GLL++L  EQ+   +RL+ L    L   A
Sbjct:  739 LSEGLLTLSLLPRSRWQTLLNLETIKARNKPKEPPKAPEAAPFFLPTVAGLETRFDVDAARPKDEDGEAFGARLAPSSFMESEFTRRLCKEDEDG-------------DYAAFFEYLKALSPSAVDLEIRSLVSLEHLAAFLSALLGRLRSHRDFEAVQAFLSVFLNVHGDVLIANSELRGLLERLEKEQKREANRLQELISYSLGTLA 934          
BLAST of Gchil1710.t1 vs. uniprot
Match: UPI001CF0E323 (WD repeat-containing protein 36-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF0E323)

HSP 1 Score: 110 bits (274), Expect = 9.610e-24
Identity = 67/214 (31.31%), Postives = 117/214 (54.67%), Query Frame = 0
Query:   44 LSEEIITLSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDLNAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLETRFHDATRFMNSLDASGVDMEIRTMG----GRRTLRNAALFFVE-RLGSSQGFELTQAHLGVFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSLSAHFSGQL 252
            LS+E++TLS  P S+W  L++L+ IK+RNKP+EPPK  ++APFF+PT + L  +F    E K +   D ++ S+   ++K+      +      L +      +      + S+  S +D EIR++G    G   L    + F+E +LG+ + FELT+A LG+ L++HGG +A++ E + + ++L  E   AW  ++ L +    L  +    +
Sbjct:  690 LSDELVTLSLLPQSRWRHLTSLELIKKRNKPVEPPKAPKAAPFFLPTTQELVPKFASTEEEKPD---DMEAKSKILNMKKL----QPDTEFQIMLQDCAKTENYEPVITLLKSMGPSSIDAEIRSLGPEAGGDLHLLQLFMLFIEHQLGTRRDFELTEAVLGLLLKLHGGVIAENPELALIAKRLQQEHTAAWSNIQDLLNQCSCLIGYLKSAV 896          
The following BLAST results are available for this feature:
BLAST of Gchil1710.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVU0_9FLOR9.570e-8458.94WD repeat-containing protein 36 n=1 Tax=Gracilario... [more]
R7QPH4_CHOCR8.350e-5548.85WD40-repeat containing protein n=1 Tax=Chondrus cr... [more]
A0A7S2ZIH4_9RHOD1.810e-3334.29Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZGB5_9RHOD3.980e-3337.26Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2G8LP09_STIJA1.800e-2736.79Putative WD repeat-containing protein 36 n=1 Tax=S... [more]
UPI001458982C2.450e-2535.71WD repeat-containing protein 36-like n=1 Tax=Pecte... [more]
A0A2N5VWM8_9BASI1.170e-2435.56Utp21 domain-containing protein n=3 Tax=Puccinia c... [more]
A0A482WGK4_LAOST4.750e-2435.41Utp21 domain-containing protein (Fragment) n=1 Tax... [more]
J4UCM6_TRIAS7.160e-2434.93WD-repeat protein n=2 Tax=Trichosporon asahii var.... [more]
UPI001CF0E3239.610e-2431.31WD repeat-containing protein 36-like isoform X1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007319Small-subunit processome, Utp21PFAMPF04192Utp21coord: 44..242
e-value: 3.0E-41
score: 141.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..40
NoneNo IPR availablePANTHERPTHR22840WD REPEAT-CONTAINING PROTEIN 36coord: 10..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1946659..1947417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1710.t1Gchil1710.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1946659..1947417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1710.t1 ID=Gchil1710.t1|Name=Gchil1710.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=253bp
MRAPLNVEDQDTEADEESDTDSEMQNYEEGMRDIPTDEGKGVPLSEEIIT
LSTEPTSKWTVLSNLQAIKERNKPIEPPKKGESAPFFIPTKKSLQLEFDL
NAENKANFTGDGKSDSQQGKIRKVLMNGNEEGWMNSTLGNLLLETRFHDA
TRFMNSLDASGVDMEIRTMGGRRTLRNAALFFVERLGSSQGFELTQAHLG
VFLRVHGGELAKDEEGSGLLQKLLDEQREAWDRLRCLFDSVLSLSAHFSG
QL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007319SSU_processome_Utp21