Gchil1706.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1706.t1
Unique Name	Gchil1706.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	345

Homology

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BLAST of Gchil1706.t1 vs. uniprot
Match: A0A2V3IW12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW12_9FLOR)

HSP 1 Score: 248 bits (633), Expect = 1.670e-76
Identity = 159/314 (50.64%), Postives = 208/314 (66.24%), Query Frame = 0

Query:   43 PIVTFRVSCLRKTRRPQGLNVGLLTITEAKLLFTAKYLNVTPEDADVTIKLSEIHHARRAGCFKRLLPHGVLIKCRRGPDYLMIMTSAHHQQRLIKLLNQKLGRLRRPKRIVKEALGRLASDPATERTDSGSNQDNATHTQVP--SSSPHRNP--SSHIVIASRSAGSSERLPLRLGRRRKKSD--ASAHNSTLGT---SDQVVQSVPSSKPPSSPSIAVKPSESEVQPSIPA----KGFAFATDFSSQMVEMTLSVPIPDVSAIIEHVLSFRSSEGVFFFLATSFLLITTYGILSSVRMMSFRLALIKEMINR 343
            P+ +FR SC+RK RRPQGLNVG L IT  K++FTA YLNV P DA+V I+LSE+H A RA C+K+LLPH VLIKCRRGPDYLM MTS   Q +L+ +L++ L  L RPKR VK+AL RLASD + +R + G+ ++ A    +P   SSP R    SS       S+G  + L  RL RRR +SD     H    G    SD  +++V S+             E+ +Q +       K F FATD +S+ VE+TLSVPIP+VS + +HV SFRS+E +FF LAT+FLL+TTYGILSSVRMM+FRLA+IKE++++
Sbjct:   58 PMASFRASCMRKARRPQGLNVGRLYITSTKVVFTASYLNVAPHDANVKIELSEVHQACRA-CYKKLLPHSVLIKCRRGPDYLMAMTSPQQQDQLMAVLDKVLQLLPRPKRTVKDALARLASDSSGDRANFGAEREPARVKGIPLSKSSPDRTSPKSSDDTTQGGSSGKLQALLPRL-RRRIRSDEGTQVHREESGDASLSDGRLKTVTSAN-----------KETYIQRNATGDDTPKSFNFATDITSEKVELTLSVPIPNVSPVAQHVRSFRSAESLFFLLATAFLLVTTYGILSSVRMMTFRLAIIKELVSQ 358

The following BLAST results are available for this feature:

BLAST of Gchil1706.t1 vs. uniprot

BLAST of Gchil1706.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IW12_9FLOR	1.670e-76	50.64	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..202
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 325..344
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..305
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 306..324
None	No IPR available	TMHMM	TMhelix		coord: 306..328

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004403_pilon	contig	tig00004403_pilon:1850142..1851176 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1706.t1	Gchil1706.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004403_pilon 1850142..1851176 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1706.t1 ID=Gchil1706.t1|Name=Gchil1706.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=345bp
MKIVRPNSSSQTPEPAASSSSSHPHSAQPLPPLTLPPSPSKPPIVTFRVS
CLRKTRRPQGLNVGLLTITEAKLLFTAKYLNVTPEDADVTIKLSEIHHAR
RAGCFKRLLPHGVLIKCRRGPDYLMIMTSAHHQQRLIKLLNQKLGRLRRP
KRIVKEALGRLASDPATERTDSGSNQDNATHTQVPSSSPHRNPSSHIVIA
SRSAGSSERLPLRLGRRRKKSDASAHNSTLGTSDQVVQSVPSSKPPSSPS
IAVKPSESEVQPSIPAKGFAFATDFSSQMVEMTLSVPIPDVSAIIEHVLS
FRSSEGVFFFLATSFLLITTYGILSSVRMMSFRLALIKEMINRG*