Gchil1674.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1674.t1
Unique Name	Gchil1674.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	109

Homology

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BLAST of Gchil1674.t1 vs. uniprot
Match: A0A2V3J546_9FLOR (Cytochrome c n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J546_9FLOR)

HSP 1 Score: 217 bits (552), Expect = 1.610e-71
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 0

Query:    1 MAVPDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANTQ 108
            MAVPDGNV KGAKIFKTKCSQCHTY++GGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGD+TLFDYLLNPKKYIKGTKMVFAGLKKEKDR DLI+FLKANTQ
Sbjct:    1 MAVPDGNVAKGAKIFKTKCSQCHTYEKGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDETLFDYLLNPKKYIKGTKMVFAGLKKEKDRHDLISFLKANTQ 108

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BLAST of Gchil1674.t1 vs. uniprot
Match: R7QDE3_CHOCR (Similar to cytochrome c (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDE3_CHOCR)

HSP 1 Score: 196 bits (498), Expect = 3.380e-63
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0

Query:    1 MAVPDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANT 107
            M +P G + KGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGR +G+V+GFAYTAANKNSGIIW DQTLF+YLLNPK+YIKGTKMVFAGLKKE+DRADLI FLK +T
Sbjct:    7 MGIPAGRIEKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRQSGSVEGFAYTAANKNSGIIWSDQTLFEYLLNPKRYIKGTKMVFAGLKKEQDRADLIEFLKTHT 113

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BLAST of Gchil1674.t1 vs. uniprot
Match: M1VHH6_CYAM1 (Similar to cytochrome c n=2 Tax=Cyanidiaceae TaxID=265316 RepID=M1VHH6_CYAM1)

HSP 1 Score: 171 bits (434), Expect = 1.710e-53
Identity = 79/105 (75.24%), Postives = 93/105 (88.57%), Query Frame = 0

Query:    3 VPDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANT 107
            +P+G+ ++G KIFKTKCSQCHTY++GG TKQGPNL GLFGR AG+V GFAYTAANKNSG++W D+TLF+YL NPKKYI GTKMVFAGLKK ++RADLIAFLK  T
Sbjct:    4 IPEGDASRGEKIFKTKCSQCHTYEKGGPTKQGPNLHGLFGRPAGSVPGFAYTAANKNSGVVWKDETLFEYLENPKKYIPGTKMVFAGLKKPQERADLIAFLKKAT 108

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BLAST of Gchil1674.t1 vs. uniprot
Match: C1EDX4_MICCC (Cytochrome c domain-containing protein n=8 Tax=Mamiellales TaxID=13792 RepID=C1EDX4_MICCC)

HSP 1 Score: 165 bits (418), Expect = 5.010e-51
Identity = 76/102 (74.51%), Postives = 88/102 (86.27%), Query Frame = 0

Query:    4 PDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKA 105
            P G+  KGAKIFKTKC+QCH  + GGG KQGPNL GLFGR +GT +GFAY+AANKN G+ WG++TL+DYLLNPKKYI GTKMVFAGLKK +DRADLIA+LKA
Sbjct:    8 PAGDAEKGAKIFKTKCAQCHVAESGGGHKQGPNLGGLFGRVSGTTEGFAYSAANKNKGVKWGEETLYDYLLNPKKYIPGTKMVFAGLKKPQDRADLIAYLKA 109

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BLAST of Gchil1674.t1 vs. uniprot
Match: A4RW27_OSTLU (Cytochrome c domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RW27_OSTLU)

HSP 1 Score: 165 bits (418), Expect = 5.010e-51
Identity = 75/105 (71.43%), Postives = 89/105 (84.76%), Query Frame = 0

Query:    4 PDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANTQ 108
            P GN  KGAKIFKTKC+QCH  ++GGG KQGPNL GLFGR +GT +GF+Y+AANKN G+ W + TL+DYLLNPKKYI GTKMVFAGLKK +DRADLIA+LK +T+
Sbjct:    8 PAGNAAKGAKIFKTKCAQCHVAEKGGGHKQGPNLGGLFGRVSGTTEGFSYSAANKNKGVTWSENTLYDYLLNPKKYIPGTKMVFAGLKKPEDRADLIAYLKESTK 112

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BLAST of Gchil1674.t1 vs. uniprot
Match: A0A7S3EMV1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMV1_9RHOD)

HSP 1 Score: 166 bits (421), Expect = 1.480e-50
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 0

Query:    6 GNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANT 107
            G++ KG K+FKTKCSQCHTYD+GG TKQGPNL GLFGR +G+V+GF+YTAANKNSGI+WGD TLF+YL NPKK I GTKMVFAGLKKE +R DLIAFLK  T
Sbjct:   77 GDLAKGEKLFKTKCSQCHTYDKGGMTKQGPNLHGLFGRQSGSVEGFSYTAANKNSGILWGDDTLFEYLKNPKKMIPGTKMVFAGLKKESERRDLIAFLKKVT 178

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BLAST of Gchil1674.t1 vs. uniprot
Match: A0A5A8CS41_CAFRO (Cytochrome c domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CS41_CAFRO)

HSP 1 Score: 162 bits (411), Expect = 4.410e-50
Identity = 73/101 (72.28%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    7 NVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANT 107
            +V  GAKIFKTKC+QCHT ++GG TKQGPNLWG+ GR AGTV G+AY+ ANK SG+ WG+ TLF+YL NPKKYIKGTKM+FAGLKKE DR DLIA+LK +T
Sbjct:    2 SVANGAKIFKTKCAQCHTVEEGGATKQGPNLWGIIGRVAGTVPGYAYSTANKTSGVTWGEDTLFEYLKNPKKYIKGTKMIFAGLKKEGDRNDLIAYLKDST 102

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BLAST of Gchil1674.t1 vs. uniprot
Match: A0A8J5XD05_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XD05_DIALT)

HSP 1 Score: 162 bits (411), Expect = 5.160e-50
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0

Query:    1 MAVPDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANT 107
            M VPDG+   GAKIFK KC+ CHTYD+GG +K GPNL+GLFGRT+GTV+G++YT AN++ G++W D TLFDYL NPKKYI GTKM FAG KK ++RAD+IAFLK  T
Sbjct:    1 MGVPDGDAKSGAKIFKVKCATCHTYDKGGASKTGPNLYGLFGRTSGTVEGYSYTQANRDKGVVWNDDTLFDYLENPKKYIPGTKMAFAGFKKPQERADVIAFLKEAT 107

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BLAST of Gchil1674.t1 vs. uniprot
Match: A0A7S1XIX6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIX6_9RHOD)

HSP 1 Score: 163 bits (413), Expect = 8.970e-50
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 0

Query:    6 GNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANT 107
            GN  KGAK+FKTKCSQCHTY+ G   KQGPNL GLFGR +GTV+GF+YTAANKNSGI W   TLF+YL NPKKYI GTKMVFAGLKKE++RADLIAFLK  T
Sbjct:   46 GNEEKGAKLFKTKCSQCHTYEAGAPAKQGPNLSGLFGRQSGTVEGFSYTAANKNSGITWNQDTLFEYLENPKKYIPGTKMVFAGLKKEQERADLIAFLKQAT 147

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BLAST of Gchil1674.t1 vs. uniprot
Match: M2VTN6_GALSU (Ubiquitin n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTN6_GALSU)

HSP 1 Score: 164 bits (416), Expect = 9.600e-50
Identity = 76/106 (71.70%), Postives = 91/106 (85.85%), Query Frame = 0

Query:    2 AVPDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDGFAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLIAFLKANT 107
            A+P+G+ T+G KIFKTKC+QCHTY+ GG  KQGPNL GLFGR AG+V  F+Y+AANKNSGI+W + TLF+YL+ PKKYI GTKMVFAGLKKE++RADLIAFLK  T
Sbjct:   77 AIPEGDPTRGEKIFKTKCAQCHTYESGGINKQGPNLHGLFGRPAGSVPSFSYSAANKNSGIVWNEDTLFEYLIAPKKYIPGTKMVFAGLKKEQERADLIAFLKKAT 182

The following BLAST results are available for this feature:

BLAST of Gchil1674.t1 vs. uniprot

BLAST of Gchil1674.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3J546_9FLOR	1.610e-71	94.44	Cytochrome c n=1 Tax=Gracilariopsis chorda TaxID=4...	[more]
R7QDE3_CHOCR	3.380e-63	84.11	Similar to cytochrome c (Fragment) n=1 Tax=Chondru...	[more]
M1VHH6_CYAM1	1.710e-53	75.24	Similar to cytochrome c n=2 Tax=Cyanidiaceae TaxID...	[more]
C1EDX4_MICCC	5.010e-51	74.51	Cytochrome c domain-containing protein n=8 Tax=Mam...	[more]
A4RW27_OSTLU	5.010e-51	71.43	Cytochrome c domain-containing protein n=1 Tax=Ost...	[more]
A0A7S3EMV1_9RHOD	1.480e-50	76.47	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A5A8CS41_CAFRO	4.410e-50	72.28	Cytochrome c domain-containing protein n=2 Tax=Caf...	[more]
A0A8J5XD05_DIALT	5.160e-50	67.29	Uncharacterized protein n=1 Tax=Diacronema lutheri...	[more]
A0A7S1XIX6_9RHOD	8.970e-50	76.47	Hypothetical protein n=1 Tax=Erythrolobus australi...	[more]
M2VTN6_GALSU	9.600e-50	71.70	Ubiquitin n=1 Tax=Galdieria sulphuraria TaxID=1300...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002327	Cytochrome c, class IA/ IB	PRINTS	PR00604	CYTCHRMECIAB	coord: 31..46 score: 65.71 coord: 18..25 score: 66.94 coord: 47..57 score: 53.19 coord: 61..77 score: 58.38 coord: 80..90 score: 75.28 coord: 97..105 score: 65.32
IPR002327	Cytochrome c, class IA/ IB	PANTHER	PTHR11961	CYTOCHROME C	coord: 3..107
IPR009056	Cytochrome c-like domain	PFAM	PF00034	Cytochrom_C	coord: 9..104 e-value: 2.2E-11 score: 44.6
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 6..107 score: 14.844518
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 1..106 e-value: 1.7E-42 score: 146.7
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 5..104
None	No IPR available	PANTHER	PTHR11961:SF32	CYTOCHROME C	coord: 3..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004403_pilon	contig	tig00004403_pilon:1458717..1459242 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1674.t1	Gchil1674.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004403_pilon 1458717..1459242 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1674.t1 ID=Gchil1674.t1|Name=Gchil1674.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=109bp
MAVPDGNVTKGAKIFKTKCSQCHTYDQGGGTKQGPNLWGLFGRTAGTVDG
FAYTAANKNSGIIWGDQTLFDYLLNPKKYIKGTKMVFAGLKKEKDRADLI
AFLKANTQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002327	Cyt_c_1A/1B
IPR009056	Cyt_c-like_dom
IPR036909	Cyt_c-like_dom_sf